Experiment set18S30 for Pseudomonas syringae pv. syringae B728a

Compare to:

no stress control

200 most detrimental genes:

  gene name fitness t score description  
Psyr_0383 +2.3 2.6 Twin-arginine translocation protein TatB compare
Psyr_2088 +1.7 2.5 2-methylaconitate cis-trans isomerase compare
Psyr_1121 +1.5 2.7 6-phosphogluconolactonase compare
Psyr_2386 +1.3 4.5 hypothetical protein compare
Psyr_1668 +1.2 5.5 amidophosphoribosyltransferase compare
Psyr_3905 +1.1 6.9 glycerol kinase compare
Psyr_0831 +1.0 2.0 Two-component response regulator CbrB compare
Psyr_1212 +1.0 2.0 type III secretion protein HrpO compare
Psyr_4786 +1.0 2.4 hypothetical protein compare
Psyr_0907 +0.9 2.1 conserved hypothetical protein compare
Psyr_1021 +0.9 4.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_3701 +0.9 1.6 thioredoxin, putative compare
Psyr_1662 +0.9 4.4 tRNA pseudouridine synthase compare
Psyr_2562 +0.8 2.2 hypothetical protein compare
Psyr_2468 +0.8 1.8 Enoyl-CoA hydratase/isomerase compare
Psyr_0147 +0.8 3.3 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein compare
Psyr_2067 +0.8 3.2 ABC transporter compare
Psyr_4932 +0.8 5.5 agmatine deiminase compare
Psyr_3567 +0.8 1.9 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_2245 +0.8 1.7 conserved domain protein compare
Psyr_1269 +0.8 1.9 phosphoribosylformylglycinamidine synthase compare
Psyr_1717 +0.7 2.5 TPR repeat:von Willebrand factor, type A compare
Psyr_1022 +0.7 2.5 conserved hypothetical protein compare
Psyr_2285 +0.7 1.2 Twin-arginine translocation pathway signal compare
Psyr_2039 +0.7 2.3 Fimbrial protein compare
Psyr_3878 +0.7 3.6 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_1505 +0.7 2.6 Protein of unknown function DUF156 compare
Psyr_0623 +0.7 1.7 Peptidase S24, S26A and S26B compare
Psyr_1638 +0.7 1.5 RNAse E compare
Psyr_1163 +0.7 2.4 Isochorismatase hydrolase compare
Psyr_3423 +0.7 4.9 coproporphyrinogen III oxidase, anaerobic compare
Psyr_3896 +0.7 1.5 BFD-like [2Fe-2S]-binding region compare
Psyr_3673 +0.7 1.2 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_5102 +0.7 2.0 ABC transporter compare
Psyr_3571 +0.6 3.5 L-arginine-binding protein / L-ornithine-binding protein compare
Psyr_0724 +0.6 1.5 conserved hypothetical protein compare
Psyr_4388 +0.6 3.2 Response regulator receiver compare
Psyr_1424 +0.6 1.5 Peptidase S24, S26A and S26B compare
Psyr_1019 +0.6 2.7 Dihydroneopterin aldolase compare
Psyr_3458 +0.6 1.1 Flagellar hook-basal body complex protein FliE compare
Psyr_1333 +0.6 2.8 UBA/THIF-type NAD/FAD binding fold protein compare
Psyr_4933 +0.6 3.6 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_1152 +0.6 1.1 transcriptional regulator, ArsR family compare
Psyr_0525 +0.6 3.3 Lipopolysaccharide kinase compare
Psyr_3857 +0.6 2.3 conserved hypothetical protein compare
Psyr_4940 +0.6 1.6 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_4381 +0.6 5.2 arginine decarboxylase compare
Psyr_3600 +0.6 1.9 transcriptional regulator, LysR family compare
Psyr_3569 +0.6 4.7 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_3904 +0.6 3.3 Major intrinsic protein compare
Psyr_1609 +0.6 3.0 Aspartyl aminopeptidase compare
Psyr_1807 +0.6 2.5 Allantoicase compare
Psyr_2393 +0.6 3.1 Flavin reductase-like protein compare
Psyr_3566 +0.6 2.6 transcriptional regulator, AraC family compare
Psyr_3915 +0.6 1.8 Alpha/beta hydrolase fold protein compare
Psyr_2973 +0.6 1.1 Glyoxalase I compare
Psyr_1250 +0.6 1.5 conserved hypothetical protein compare
Psyr_1968 +0.6 1.7 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_0411 +0.6 4.9 glutamate synthase (NADPH) large subunit compare
Psyr_1747 +0.6 1.8 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_3874 +0.6 3.2 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_1515 +0.6 2.5 hypothetical protein compare
Psyr_4881 +0.5 1.8 RNA methyltransferase TrmH, group 2 compare
Psyr_1388 +0.5 2.8 Protein of unknown function UPF0066 compare
Psyr_0356 +0.5 0.9 L-cystine ABC transporter ATP-binding protein / Diaminopimelate ABC transporter ATP-binding protein compare
Psyr_1227 +0.5 0.6 Queuosine biosynthesis protein compare
Psyr_0044 +0.5 1.4 transferase hexapeptide repeat protein compare
Psyr_4068 +0.5 2.5 conserved hypothetical protein compare
Psyr_3876 +0.5 4.8 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_2767 +0.5 1.2 Glycoside hydrolase, family 19 compare
Psyr_4831 +0.5 1.8 ABC transporter compare
Psyr_1458 +0.5 1.6 hypothetical protein compare
Psyr_2554 +0.5 2.6 Fatty acid desaturase compare
Psyr_2894 +0.5 1.4 conserved hypothetical protein compare
Psyr_4380 +0.5 1.0 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_3568 +0.5 2.0 Succinylglutamate desuccinylase/aspartoacylase compare
Psyr_4860 +0.5 0.8 Integrase, catalytic region compare
Psyr_4739 +0.5 4.0 tRNA (guanine-N(7)-)-methyltransferase compare
Psyr_0822 +0.5 1.0 1-phosphofructokinase compare
Psyr_3618 +0.5 1.5 Catalytic LigB subunit of aromatic ring-opening dioxygenase compare
Psyr_2118 +0.5 1.4 protein of unknown function DUF883 compare
Psyr_5073 +0.5 2.6 conserved hypothetical protein compare
Psyr_2031 +0.5 1.8 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_3570 +0.5 2.9 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_1108 +0.5 3.4 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_3518 +0.5 1.8 hypothetical protein compare
Psyr_2403 +0.5 2.6 Protein of unknown function DUF1330 compare
Psyr_3841 +0.5 1.5 conserved hypothetical protein compare
Psyr_0250 +0.5 1.7 conserved hypothetical protein compare
Psyr_3934 +0.5 0.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_0986 +0.5 1.7 16S rRNA m(2)G 1207 methyltransferase compare
Psyr_1193 +0.5 1.2 type III helper protein HrpZ1 compare
Psyr_3473 +0.5 1.7 Flagellar P-ring protein compare
Psyr_0546 +0.5 2.0 lipoprotein, putative compare
Psyr_2930 +0.5 1.2 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_2984 +0.5 1.1 conserved hypothetical protein compare
Psyr_3202 +0.5 0.6 NADH dehydrogenase subunit G compare
Psyr_3875 +0.5 3.8 amino acid ABC transporter membrane protein 1, PAAT family compare
Psyr_3620 +0.5 0.6 hypothetical protein compare
Psyr_0726 +0.5 1.6 ribosomal large subunit pseudouridine synthase D compare
Psyr_4259 +0.5 3.8 ATP-dependent protease, putative compare
Psyr_2270 +0.5 1.7 transferase hexapeptide repeat protein compare
Psyr_0833 +0.5 1.8 conserved hypothetical protein compare
Psyr_4874 +0.5 0.8 ABC transporter compare
Psyr_1748 +0.5 2.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_2531 +0.5 2.1 transcriptional regulator, LysR family compare
Psyr_4491 +0.5 0.8 Deoxyribose-phosphate aldolase compare
Psyr_1187 +0.4 1.8 type III chaperone protein ShcE compare
Psyr_1140 +0.4 1.3 Disulfide bond formation protein DsbB compare
Psyr_2275 +0.4 1.4 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_0081 +0.4 0.5 ABC transporter compare
Psyr_4576 +0.4 2.3 OsmC-like protein compare
Psyr_2532 +0.4 2.0 transcriptional regulator, LysR family compare
Psyr_3837 +0.4 1.2 conserved hypothetical protein compare
Psyr_2508 +0.4 1.6 transcriptional regulator, IclR family compare
Psyr_0464 +0.4 1.4 hypothetical protein compare
Psyr_4836 +0.4 3.1 N-formylglutamate deformylase compare
Psyr_0385 +0.4 1.6 phosphoribosyl-ATP pyrophosphatase compare
Psyr_0350 +0.4 1.0 ABC transporter compare
Psyr_4015 +0.4 0.7 conserved domain protein compare
Psyr_4904 +0.4 2.0 hypothetical protein compare
Psyr_4455 +0.4 0.8 conserved hypothetical protein compare
Psyr_1039 +0.4 0.8 FecR protein compare
Psyr_0406 +0.4 1.4 Pilus assembly protein, PilQ compare
Psyr_3702 +0.4 0.6 Arsenate reductase compare
Psyr_3596 +0.4 1.6 Selenoprotein W-related protein compare
Psyr_2954 +0.4 2.0 Phospholipase/Carboxylesterase compare
Psyr_1024 +0.4 1.4 Flavodoxin/nitric oxide synthase compare
Psyr_3777 +0.4 2.0 conserved hypothetical protein compare
Psyr_4473 +0.4 2.7 OmpW compare
Psyr_3900 +0.4 1.5 conserved hypothetical protein compare
Psyr_2202 +0.4 1.5 ABC transporter compare
Psyr_4278 +0.4 1.0 regulatory protein, LuxR compare
Psyr_0373 +0.4 0.8 CDS compare
Psyr_4674 +0.4 2.2 Radical SAM compare
Psyr_4255 +0.4 1.2 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_1946 +0.4 0.6 diaminobutyrate aminotransferase apoenzyme compare
Psyr_3530 +0.4 1.8 transcriptional regulator, GntR family compare
Psyr_4294 +0.4 1.6 Histone deacetylase family protein compare
Psyr_1779 +0.4 1.4 hypothetical protein compare
Psyr_3337 +0.4 1.3 gluconate kinase, SKI family compare
Psyr_2260 +0.4 1.9 Amidase compare
Psyr_3378 +0.4 2.2 Fusaric acid resistance protein conserved region compare
Psyr_4049 +0.4 1.5 lyso-ornithine lipid acyltransferase compare
Psyr_1315 +0.4 1.6 lipoprotein, putative compare
Psyr_4752 +0.4 1.4 Insulinase-like:Peptidase M16, C-terminal compare
Psyr_4648 +0.4 2.4 hypothetical protein compare
Psyr_2826 +0.4 2.1 hypothetical protein compare
Psyr_2278 +0.4 1.4 luciferase compare
Psyr_3149 +0.4 1.8 General secretion pathway protein G compare
Psyr_3427 +0.4 1.7 conserved hypothetical protein compare
Psyr_4963 +0.4 2.1 hypothetical protein compare
Psyr_2557 +0.4 1.0 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_3224 +0.4 1.3 Low molecular weight phosphotyrosine protein phosphatase compare
Psyr_4463 +0.4 1.2 Protein of unknown function DUF193 compare
Psyr_4586 +0.4 0.9 tail protein, putative compare
Psyr_2264 +0.4 1.0 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_0550 +0.4 1.7 Protein of unknown function UPF0227 compare
Psyr_3825 +0.4 1.8 transcriptional regulator, LysR family compare
Psyr_2488 +0.4 1.5 hypothetical protein compare
Psyr_2330 +0.4 1.5 FAD dependent oxidoreductase compare
Psyr_1728 +0.4 1.4 tRNA--hydroxylase compare
Psyr_1721 +0.4 1.7 moxR protein, putative compare
Psyr_0447 +0.4 0.8 malonate decarboxylase subunit, putative compare
Psyr_0998 +0.4 1.1 Isochorismatase hydrolase compare
Psyr_0529 +0.4 0.8 Glycosyl transferase, group 1 compare
Psyr_4151 +0.4 0.6 Phosphocarrier HPr protein compare
Psyr_0344 +0.4 1.9 Secretion protein HlyD compare
Psyr_3040 +0.4 1.8 conserved hypothetical protein compare
Psyr_2401 +0.4 1.7 extracellular solute-binding protein, family 1 compare
Psyr_4912 +0.4 2.5 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_3039 +0.4 1.3 protein of unknown function DUF883 compare
Psyr_1689 +0.4 1.6 conserved hypothetical protein compare
Psyr_1225 +0.4 1.9 hypothetical protein compare
Psyr_4911 +0.4 2.2 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_1616 +0.4 1.0 Rieske [2Fe-2S] region compare
Psyr_2820 +0.4 1.5 RecT protein compare
Psyr_2121 +0.4 1.6 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_2422 +0.4 1.7 transcriptional regulator, LysR family compare
Psyr_2397 +0.4 1.2 transcriptional regulator, LysR family compare
Psyr_4071 +0.4 1.7 Phosphoesterase, PA-phosphatase related protein compare
Psyr_1153 +0.4 1.7 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_2850 +0.4 1.6 hypothetical protein compare
Psyr_1489 +0.4 1.7 hypothetical protein compare
Psyr_3751 +0.4 1.2 Carbon storage regulator compare
Psyr_3610 +0.4 0.8 GAF compare
Psyr_4112 +0.4 2.5 Protein of unknown function UPF0011 compare
Psyr_2212 +0.4 2.3 Arginase/agmatinase/formiminoglutamase compare
Psyr_2872 +0.4 0.7 hypothetical protein compare
Psyr_2813 +0.4 1.9 conserved hypothetical protein compare
Psyr_4897 +0.4 1.2 imidazoleglycerol-phosphate dehydratase compare
Psyr_0690 +0.4 1.5 3-hydroxyisobutyrate dehydrogenase compare
Psyr_3195 +0.4 1.5 NolW-like protein compare
Psyr_2244 +0.4 1.2 DNA topoisomerase III compare
Psyr_3703 +0.3 1.5 Flavodoxin/nitric oxide synthase compare
Psyr_4955 +0.3 0.8 Protein of unknown function DUF1316 compare
Psyr_3773 +0.3 2.6 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_4801 +0.3 1.4 Outer membrane efflux protein compare
Psyr_2255 +0.3 0.8 ABC transporter compare
Psyr_2719 +0.3 1.2 transcriptional regulator, TetR family compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in no stress control experiments