Experiment set18S29 for Pseudomonas syringae pv. syringae B728a

Compare to:

no stress control

200 most detrimental genes:

  gene name fitness t score description  
Psyr_1269 +1.4 3.7 phosphoribosylformylglycinamidine synthase compare
Psyr_2285 +1.3 2.3 Twin-arginine translocation pathway signal compare
Psyr_3567 +1.2 4.0 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_4015 +1.1 2.2 conserved domain protein compare
Psyr_1152 +1.1 3.5 transcriptional regulator, ArsR family compare
Psyr_1668 +1.0 4.6 amidophosphoribosyltransferase compare
Psyr_1573 +1.0 4.4 cyclic nucleotide-binding protein compare
Psyr_4480 +1.0 1.7 outer membrane transport energization protein TonB compare
Psyr_2501 +1.0 2.8 Hemerythrin compare
Psyr_1121 +1.0 1.4 6-phosphogluconolactonase compare
Psyr_0383 +1.0 1.2 Twin-arginine translocation protein TatB compare
Psyr_1021 +1.0 4.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_3905 +1.0 5.3 glycerol kinase compare
Psyr_3597 +0.9 1.9 ABC transporter compare
Psyr_1968 +0.9 2.2 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3208 +0.9 1.8 NADH dehydrogenase subunit M compare
Psyr_2468 +0.9 1.8 Enoyl-CoA hydratase/isomerase compare
Psyr_1227 +0.9 1.1 Queuosine biosynthesis protein compare
Psyr_2143 +0.9 2.7 delta1-piperideine 2-carboxylate reductase compare
Psyr_0858 +0.9 2.6 conserved hypothetical protein compare
Psyr_4860 +0.9 1.4 Integrase, catalytic region compare
Psyr_0822 +0.8 0.8 1-phosphofructokinase compare
Psyr_1019 +0.8 3.4 Dihydroneopterin aldolase compare
Psyr_1024 +0.8 2.1 Flavodoxin/nitric oxide synthase compare
Psyr_4637 +0.8 2.7 acyl-phosphate glycerol-3-phosphate acyltransferase compare
Psyr_4932 +0.8 5.7 agmatine deiminase compare
Psyr_4116 +0.8 0.7 Transport-associated protein compare
Psyr_4933 +0.8 4.3 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_3952 +0.8 2.1 conserved hypothetical protein compare
Psyr_0550 +0.8 3.9 Protein of unknown function UPF0227 compare
Psyr_1138 +0.8 2.4 GCN5-related N-acetyltransferase compare
Psyr_3600 +0.7 2.2 transcriptional regulator, LysR family compare
Psyr_4893 +0.7 2.1 imidazole glycerol phosphate synthase subunit hisF compare
Psyr_3878 +0.7 4.0 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4336 +0.7 2.7 ribosomal large subunit pseudouridine synthase E compare
Psyr_3107 +0.7 2.5 conserved hypothetical protein compare
Psyr_0511 +0.7 2.0 conserved hypothetical protein compare
Psyr_3458 +0.7 1.3 Flagellar hook-basal body complex protein FliE compare
Psyr_1250 +0.7 1.7 conserved hypothetical protein compare
Psyr_1333 +0.7 2.5 UBA/THIF-type NAD/FAD binding fold protein compare
Psyr_3423 +0.7 5.1 coproporphyrinogen III oxidase, anaerobic compare
Psyr_2360 +0.7 1.8 CBS compare
Psyr_4381 +0.7 5.6 arginine decarboxylase compare
Psyr_2562 +0.7 2.0 hypothetical protein compare
Psyr_4491 +0.7 1.4 Deoxyribose-phosphate aldolase compare
Psyr_2114 +0.6 2.4 two component transcriptional regulator, LuxR family compare
Psyr_4285 +0.6 1.5 Ferredoxin:[2Fe-2S]-binding protein compare
Psyr_4068 +0.6 2.2 conserved hypothetical protein compare
Psyr_2403 +0.6 3.1 Protein of unknown function DUF1330 compare
Psyr_3377 +0.6 1.9 transcriptional regulator, MarR family compare
Psyr_4911 +0.6 3.2 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_0453 +0.6 3.7 16S rRNA m(3)U-1498 methyltransferase compare
Psyr_1193 +0.6 1.6 type III helper protein HrpZ1 compare
Psyr_4955 +0.6 2.0 Protein of unknown function DUF1316 compare
Psyr_1746 +0.6 2.9 Trigger factor compare
Psyr_0541 +0.6 1.7 Small multidrug resistance protein compare
Psyr_0385 +0.6 2.2 phosphoribosyl-ATP pyrophosphatase compare
Psyr_3462 +0.6 1.7 conserved hypothetical protein compare
Psyr_3896 +0.6 1.8 BFD-like [2Fe-2S]-binding region compare
Psyr_0623 +0.6 1.7 Peptidase S24, S26A and S26B compare
Psyr_2202 +0.6 1.9 ABC transporter compare
Psyr_3777 +0.6 2.6 conserved hypothetical protein compare
Psyr_3844 +0.6 1.4 conserved hypothetical protein compare
Psyr_3876 +0.6 4.8 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_0178 +0.6 1.9 regulator of nucleoside diphosphate kinase compare
Psyr_3904 +0.6 3.4 Major intrinsic protein compare
Psyr_4256 +0.6 2.8 conserved hypothetical protein compare
Psyr_2808 +0.6 1.0 hypothetical protein compare
Psyr_2364 +0.6 2.8 conserved hypothetical protein compare
Psyr_3874 +0.6 3.6 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_3473 +0.6 1.7 Flagellar P-ring protein compare
Psyr_1859 +0.6 1.9 conserved hypothetical protein compare
Psyr_2620 +0.6 1.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_2557 +0.5 0.8 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_3900 +0.5 1.2 conserved hypothetical protein compare
Psyr_1140 +0.5 1.6 Disulfide bond formation protein DsbB compare
Psyr_3105 +0.5 2.4 phosphate ABC transporter membrane protein 1, PhoT family compare
Psyr_3287 +0.5 1.0 DNA topoisomerase I compare
Psyr_2472 +0.5 2.7 transcriptional regulator, MerR family compare
Psyr_2765 +0.5 2.0 conserved domain protein compare
Psyr_0371 +0.5 3.9 conserved hypothetical protein compare
Psyr_1651 +0.5 2.8 Protein of unknown function DUF175 compare
Psyr_1505 +0.5 2.1 Protein of unknown function DUF156 compare
Psyr_1459 +0.5 3.0 DNA polymerase, beta-like region compare
Psyr_4112 +0.5 3.5 Protein of unknown function UPF0011 compare
Psyr_0436 +0.5 0.8 Phosphopantetheine-binding protein compare
Psyr_2190 +0.5 0.8 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_0889 +0.5 1.9 SpoVT/AbrB-like protein compare
Psyr_3701 +0.5 1.3 thioredoxin, putative compare
Psyr_0349 +0.5 1.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1130 +0.5 2.3 conserved hypothetical protein compare
Psyr_0160 +0.5 2.5 GCN5-related N-acetyltransferase compare
Psyr_1662 +0.5 2.2 tRNA pseudouridine synthase compare
Psyr_0246 +0.5 3.2 aminomethyltransferase compare
Psyr_3696 +0.5 2.0 23S rRNA m(5)U-1939 methyltransferase compare
Psyr_2787 +0.5 1.5 hypothetical protein compare
Psyr_1722 +0.5 2.1 Amidohydrolase 2 compare
Psyr_2278 +0.5 2.2 luciferase compare
Psyr_0252 +0.5 2.3 adenylate cyclase compare
Psyr_1624 +0.5 2.7 transcriptional regulator, MarR family compare
Psyr_4498 +0.5 1.6 outer membrane transport energization protein ExbD compare
Psyr_3660 +0.5 2.0 conserved hypothetical protein compare
Psyr_0411 +0.5 4.2 glutamate synthase (NADPH) large subunit compare
Psyr_4786 +0.5 1.0 hypothetical protein compare
Psyr_3592 +0.5 1.9 Nitroreductase compare
Psyr_2318 +0.5 2.1 CDS compare
Psyr_4916 +0.5 2.2 conserved hypothetical protein compare
Psyr_4465 +0.5 1.1 conserved domain protein compare
Psyr_2621 +0.5 2.4 Secretion protein HlyD compare
Psyr_0199 +0.5 1.7 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_5072 +0.5 0.7 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_0132 +0.5 1.6 conserved hypothetical protein compare
Psyr_1616 +0.5 1.6 Rieske [2Fe-2S] region compare
Psyr_3050 +0.5 2.1 Aldo/keto reductase compare
Psyr_3007 +0.5 1.2 Protein of unknown function DUF1294 compare
Psyr_3610 +0.5 1.1 GAF compare
Psyr_3233 +0.4 1.8 FMN reductase compare
Psyr_1650 +0.4 1.1 aminodeoxychorismate lyase apoprotein compare
Psyr_0726 +0.4 1.4 ribosomal large subunit pseudouridine synthase D compare
Psyr_4634 +0.4 0.7 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_0986 +0.4 1.6 16S rRNA m(2)G 1207 methyltransferase compare
Psyr_4739 +0.4 2.9 tRNA (guanine-N(7)-)-methyltransferase compare
Psyr_2144 +0.4 0.9 conserved hypothetical protein compare
Psyr_3530 +0.4 2.0 transcriptional regulator, GntR family compare
Psyr_2476 +0.4 1.6 Exodeoxyribonuclease III compare
Psyr_4301 +0.4 1.8 Protein of unknown function DUF88 compare
Psyr_3106 +0.4 2.1 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_2552 +0.4 1.5 cyclase/dehydrase compare
Psyr_1515 +0.4 1.5 hypothetical protein compare
Psyr_0864 +0.4 1.2 Protein of unknown function DUF393 compare
Psyr_2844 +0.4 1.7 hypothetical protein compare
Psyr_1807 +0.4 1.9 Allantoicase compare
Psyr_3618 +0.4 1.6 Catalytic LigB subunit of aromatic ring-opening dioxygenase compare
Psyr_1458 +0.4 1.2 hypothetical protein compare
Psyr_2508 +0.4 1.5 transcriptional regulator, IclR family compare
Psyr_4460 +0.4 0.6 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0735 +0.4 1.5 Peptidase S24, S26A and S26B compare
Psyr_3569 +0.4 3.1 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_4259 +0.4 3.3 ATP-dependent protease, putative compare
Psyr_3741 +0.4 1.4 Polyphosphate:AMP phosphotransferase compare
Psyr_2938 +0.4 1.6 transcriptional regulator, LysR family compare
Psyr_3499 +0.4 2.0 transcriptional regulator, AraC family compare
Psyr_0764 +0.4 2.6 gluconolactonase compare
Psyr_0173 +0.4 2.7 SSU ribosomal protein S6P modification protein compare
Psyr_4861 +0.4 1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1915 +0.4 1.6 Peptidase M20:Peptidase M20 compare
Psyr_4582 +0.4 0.7 hypothetical protein compare
Psyr_1688 +0.4 1.0 Protein of unknown function DUF1315 compare
Psyr_4912 +0.4 2.0 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_1489 +0.4 1.8 hypothetical protein compare
Psyr_0833 +0.4 1.5 conserved hypothetical protein compare
Psyr_0909 +0.4 2.1 transcriptional regulator, LysR family compare
Psyr_2324 +0.4 1.8 conserved hypothetical protein compare
Psyr_4740 +0.4 2.1 thiazole-phosphate synthase compare
Psyr_0169 +0.4 1.2 Hsp33 protein compare
Psyr_5073 +0.4 1.5 conserved hypothetical protein compare
Psyr_4730 +0.4 0.7 FecR protein compare
Psyr_2126 +0.4 1.7 4-carboxymuconolactone decarboxylase compare
Psyr_1987 +0.4 0.9 2-keto-3-deoxygalactonate kinase compare
Psyr_0133 +0.4 1.9 transcriptional regulator, AsnC family compare
Psyr_3018 +0.4 1.1 membrane protein, putative compare
Psyr_1381 +0.4 1.9 conserved hypothetical protein compare
Psyr_1154 +0.4 1.0 Copper/Zinc superoxide dismutase compare
Psyr_0034 +0.4 1.0 tryptophan synthase, beta chain compare
Psyr_4722 +0.4 2.1 conserved hypothetical protein compare
Psyr_3081 +0.4 0.8 Secretion protein HlyD compare
Psyr_0941 +0.4 1.8 Conserved hypothetical protein 92 compare
Psyr_1779 +0.4 1.4 hypothetical protein compare
Psyr_0979 +0.4 1.1 conserved hypothetical protein compare
Psyr_1288 +0.4 2.0 hypothetical protein compare
Psyr_1010 +0.4 2.3 Glutathione peroxidase compare
Psyr_4908 +0.4 1.5 conserved hypothetical protein compare
Psyr_3964 +0.4 2.1 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_2493 +0.4 2.1 Major facilitator superfamily compare
Psyr_2118 +0.4 1.1 protein of unknown function DUF883 compare
Psyr_1198 +0.4 1.4 type III secretion protein HrpF compare
Psyr_1150 +0.4 2.2 chemotaxis sensory transducer compare
Psyr_4294 +0.4 1.1 Histone deacetylase family protein compare
Psyr_1943 +0.4 2.0 Sigma-70 region 2 compare
Psyr_3418 +0.4 1.3 PilT protein, N-terminal compare
Psyr_3915 +0.4 1.0 Alpha/beta hydrolase fold protein compare
Psyr_2927 +0.4 1.2 transcriptional regulator, TetR family compare
Psyr_0303 +0.4 1.0 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_3755 +0.4 0.5 conserved hypothetical protein compare
Psyr_3800 +0.4 1.8 Major facilitator superfamily compare
Psyr_4473 +0.4 2.0 OmpW compare
Psyr_0955 +0.4 1.8 membrane protein, putative compare
Psyr_4422 +0.4 2.3 Protein of unknown function DUF461 compare
Psyr_0265 +0.4 2.7 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_1112 +0.4 1.9 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_2836 +0.4 1.3 hypothetical protein compare
Psyr_3875 +0.4 2.7 amino acid ABC transporter membrane protein 1, PAAT family compare
Psyr_2696 +0.4 2.0 UDP-glucose 6-dehydrogenase compare
Psyr_0184 +0.4 1.5 Protein of unknown function DUF484 compare
Psyr_0879 +0.4 2.5 GCN5-related N-acetyltransferase compare
Psyr_1988 +0.4 1.0 2-keto-3-deoxy-phosphogalactonate aldolase compare
Psyr_1280 +0.4 1.4 Cytochrome c assembly protein compare
Psyr_RNA28 +0.4 0.4 tRNA-Val compare
Psyr_2891 +0.4 2.4 amino acid ABC transporter membrane protein, PAAT family compare
Psyr_0412 +0.4 2.7 glutamate synthase (NADPH) small subunit compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in no stress control experiments