Experiment set18S267 for Paraburkholderia graminis OAS925

Compare to:

R2A with Sodium Chloride 200 mM

200 most important genes:

  gene name fitness t score description  
ABIE53_005547 -3.9 -1.6 putative porin compare
ABIE53_001963 -3.8 -1.6 hypothetical protein compare
ABIE53_000382 -3.7 -14.8 DNA-binding transcriptional LysR family regulator compare
ABIE53_004718 -3.7 -2.6 LysR family glycine cleavage system transcriptional activator compare
ABIE53_003752 -3.7 -1.5 cytochrome c-type biogenesis protein CcsB compare
ABIE53_002208 -3.5 -2.4 methyl-accepting chemotaxis protein compare
ABIE53_004913 -3.3 -11.0 putative porin compare
ABIE53_003746 -3.2 -17.8 penicillin-binding protein 1A compare
ABIE53_002494 -3.1 -3.7 outer membrane protein compare
ABIE53_002648 -3.0 -2.9 hypothetical protein compare
ABIE53_005332 -2.8 -1.3 regulator of RNase E activity RraA compare
ABIE53_004227 -2.8 -3.3 signal transduction histidine kinase compare
ABIE53_003994 -2.7 -1.8 DNA-binding protein HU-beta compare
ABIE53_006301 -2.7 -2.6 DNA-binding HxlR family transcriptional regulator compare
ABIE53_006316 -2.6 -2.0 nitrate/nitrite transporter NarK compare
ABIE53_000394 -2.5 -6.9 nitrogen fixation/metabolism regulation signal transduction histidine kinase compare
ABIE53_000659 -2.5 -2.9 phosphocarrier protein HPr compare
ABIE53_000393 -2.5 -8.7 hypothetical protein compare
ABIE53_004858 -2.4 -3.7 farnesyl diphosphate synthase compare
ABIE53_003712 -2.4 -10.5 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein compare
ABIE53_001974 -2.4 -2.5 hypothetical protein compare
ABIE53_005829 -2.4 -1.4 hypothetical protein compare
ABIE53_001588 -2.4 -3.2 triosephosphate isomerase compare
ABIE53_002587 -2.3 -1.6 DHA2 family multidrug resistance protein compare
ABIE53_002762 -2.3 -1.6 enolase compare
ABIE53_003261 -2.3 -6.8 undecaprenyl-diphosphatase compare
ABIE53_005708 -2.3 -0.9 Cu/Ag efflux protein CusF compare
ABIE53_004866 -2.3 -13.6 RNA polymerase primary sigma factor compare
ABIE53_000864 -2.3 -3.2 molecular chaperone DnaK compare
ABIE53_005782 -2.3 -1.3 hypothetical protein compare
ABIE53_000731 -2.2 -11.4 putative PurR-regulated permease PerM compare
ABIE53_000830 -2.2 -1.5 preprotein translocase subunit YajC compare
ABIE53_004834 -2.2 -2.0 DNA-binding transcriptional LysR family regulator compare
ABIE53_006030 -2.2 -2.1 hypothetical protein compare
ABIE53_004618 -2.2 -2.5 pimeloyl-ACP methyl ester carboxylesterase compare
ABIE53_001544 -2.2 -2.6 coproporphyrinogen III oxidase compare
ABIE53_002076 -2.2 -2.1 hypothetical protein compare
ABIE53_004922 -2.2 -1.7 LysR family pca operon transcriptional activator compare
ABIE53_006315 -2.2 -2.1 ACS family tartrate transporter-like MFS transporter compare
ABIE53_000153 -2.2 -10.9 O-antigen ligase compare
ABIE53_003711 -2.1 -8.6 phospholipid/cholesterol/gamma-HCH transport system permease protein compare
ABIE53_001160 -2.0 -3.4 GT2 family glycosyltransferase compare
ABIE53_006046 -2.0 -2.4 type III secretion protein L compare
ABIE53_000044 -2.0 -13.8 soluble lytic murein transglycosylase compare
ABIE53_001142 -2.0 -1.9 hypothetical protein compare
ABIE53_005361 -1.9 -4.1 O-antigen/teichoic acid export membrane protein compare
ABIE53_006350 -1.9 -2.6 peptide/nickel transport system ATP-binding protein compare
ABIE53_003586 -1.9 -3.2 putative (di)nucleoside polyphosphate hydrolase compare
ABIE53_004004 -1.9 -1.9 putative peroxidase-related enzyme compare
ABIE53_001976 -1.9 -1.0 hypothetical protein compare
ABIE53_002708 -1.9 -2.7 tetratricopeptide (TPR) repeat protein compare
ABIE53_000834 -1.9 -4.4 LysR family hydrogen peroxide-inducible transcriptional activator compare
ABIE53_003689 -1.9 -1.3 sec-independent protein translocase protein TatB compare
ABIE53_001667 -1.9 -2.5 hypothetical protein compare
ABIE53_006257 -1.9 -1.7 hypothetical protein compare
ABIE53_004325 -1.8 -1.3 hypothetical protein compare
ABIE53_004811 -1.8 -1.3 tryptophan synthase alpha chain compare
ABIE53_000599 -1.8 -8.5 cell division protein FtsN compare
ABIE53_006270 -1.8 -1.3 putative dinucleotide-binding enzyme compare
ABIE53_005792 -1.8 -1.7 putative lipoprotein YmbA compare
ABIE53_005265 -1.8 -1.9 hypothetical protein compare
ABIE53_001944 -1.8 -1.9 HTH-type transcriptional regulator/antitoxin HigA compare
ABIE53_004594 -1.8 -1.7 hypothetical protein compare
ABIE53_003710 -1.8 -8.1 phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein compare
ABIE53_006272 -1.8 -1.7 AcrR family transcriptional regulator compare
ABIE53_003610 -1.8 -1.2 cell division protein FtsQ compare
ABIE53_001989 -1.8 -2.4 repressor LexA compare
ABIE53_004457 -1.8 -1.7 hypothetical protein compare
ABIE53_006136 -1.7 -2.4 putative hydrocarbon binding protein compare
ABIE53_000391 -1.7 -6.6 heat shock protein HtpX compare
ABIE53_002538 -1.7 -2.4 DNA-binding transcriptional LysR family regulator compare
ABIE53_005241 -1.7 -2.0 uncharacterized protein YjbJ (UPF0337 family) compare
ABIE53_001739 -1.7 -2.3 hypothetical protein compare
ABIE53_005281 -1.7 -2.3 cytochrome c oxidase subunit 2 compare
ABIE53_005487 -1.7 -2.3 formylmethanofuran--tetrahydromethanopterin N-formyltransferase compare
ABIE53_005051 -1.7 -1.5 hypothetical protein compare
ABIE53_003620 -1.7 -1.9 cell division protein FtsL compare
ABIE53_000402 -1.7 -1.1 penicillin-binding protein 2 compare
ABIE53_003407 -1.7 -2.2 outer membrane protein TolC compare
ABIE53_003160 -1.6 -2.2 hypothetical protein compare
ABIE53_006241 -1.6 -1.6 sulfonate transport system ATP-binding protein compare
ABIE53_001571 -1.6 -4.7 putative Fe-S protein YdhL (DUF1289 family) compare
ABIE53_001198 -1.6 -1.8 urease subunit gamma compare
ABIE53_003287 -1.6 -6.4 4-hydroxy-3-methylbut-2-enyl diphosphate reductase compare
ABIE53_001163 -1.6 -2.2 FlaA1/EpsC-like NDP-sugar epimerase compare
ABIE53_004924 -1.6 -2.7 transcriptional regulator with XRE-family HTH domain compare
ABIE53_002117 -1.6 -1.6 ATP-dependent Lon protease compare
ABIE53_003305 -1.6 -2.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE53_001736 -1.6 -3.2 hypothetical protein compare
ABIE53_001503 -1.6 -1.6 FixJ family two-component response regulator compare
ABIE53_000006 -1.6 -2.7 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD compare
ABIE53_000375 -1.6 -2.5 PKHD-type hydroxylase compare
ABIE53_004630 -1.6 -0.6 hypothetical protein compare
ABIE53_006381 -1.6 -1.5 hypothetical protein compare
ABIE53_002102 -1.6 -4.6 hypothetical protein compare
ABIE53_002233 -1.6 -1.5 LysR family transcriptional activator of nhaA compare
ABIE53_006565 -1.6 -1.1 hypothetical protein compare
ABIE53_002480 -1.6 -2.4 putative ubiquitin-RnfH superfamily antitoxin RatB of RatAB toxin-antitoxin module compare
ABIE53_002510 -1.6 -4.1 peptide deformylase compare
ABIE53_003708 -1.6 -6.6 phospholipid transport system substrate-binding protein compare
ABIE53_004067 -1.5 -1.6 fructose transport system ATP-binding protein compare
ABIE53_001795 -1.5 -1.5 CrcB protein compare
ABIE53_002933 -1.5 -1.9 methyl-accepting chemotaxis protein compare
ABIE53_006331 -1.5 -3.2 ACS family D-galactonate transporter-like MFS transporter compare
ABIE53_004146 -1.5 -1.8 hypothetical protein compare
ABIE53_004645 -1.5 -2.0 hopanoid-associated phosphorylase compare
ABIE53_004646 -1.5 -9.0 squalene-hopene/tetraprenyl-beta-curcumene cyclase compare
ABIE53_001655 -1.5 -1.8 hypothetical protein compare
ABIE53_001746 -1.5 -2.1 hypothetical protein compare
ABIE53_003757 -1.5 -5.4 thiol:disulfide interchange protein DsbD compare
ABIE53_001185 -1.5 -1.0 UDP-glucose 4-epimerase compare
ABIE53_002285 -1.5 -2.4 2-deoxy-D-gluconate 3-dehydrogenase compare
ABIE53_002652 -1.5 -1.4 hypothetical protein compare
ABIE53_003043 -1.5 -2.4 RNA polymerase sigma-70 factor (ECF subfamily) compare
ABIE53_006162 -1.5 -2.2 glycine betaine/proline transport system substrate-binding protein compare
ABIE53_002579 -1.4 -1.2 glyoxylate carboligase compare
ABIE53_003210 -1.4 -1.3 acyl carrier protein compare
ABIE53_000633 -1.4 -1.2 hypothetical protein compare
ABIE53_003923 -1.4 -2.1 protein phosphatase compare
ABIE53_000759 -1.4 -4.5 7-cyano-7-deazaguanine reductase compare
ABIE53_005429 -1.4 -2.4 ribose transport system substrate-binding protein compare
ABIE53_001316 -1.4 -4.0 uroporphyrinogen III methyltransferase/synthase compare
ABIE53_002698 -1.4 -2.7 TetR/AcrR family transcriptional repressor of nem operon compare
ABIE53_003306 -1.4 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE53_001774 -1.4 -1.7 succinylglutamate desuccinylase compare
ABIE53_002743 -1.4 -2.6 cytoskeleton protein RodZ compare
ABIE53_004648 -1.4 -2.6 squalene synthase HpnD compare
ABIE53_006122 -1.4 -1.6 nucleotide-binding universal stress UspA family protein compare
ABIE53_006092 -1.4 -3.0 DNA-binding FadR family transcriptional regulator compare
ABIE53_006252 -1.4 -1.7 fumarylacetoacetate (FAA) hydrolase family protein compare
ABIE53_003416 -1.4 -5.8 serine protease Do compare
ABIE53_004252 -1.4 -1.7 putative pyridoxine 5'-phosphate oxidase superfamily flavin-nucleotide-binding protein compare
ABIE53_000398 -1.4 -3.0 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase compare
ABIE53_006206 -1.4 -2.9 hypothetical protein compare
ABIE53_006075 -1.4 -2.2 crotonobetainyl-CoA:carnitine CoA-transferase CaiB-like acyl-CoA transferase compare
ABIE53_001144 -1.4 -5.8 lipopolysaccharide transport system ATP-binding protein compare
ABIE53_002446 -1.4 -1.4 hypothetical protein compare
ABIE53_005699 -1.4 -2.6 rhamnose transport system permease protein compare
ABIE53_001798 -1.4 -2.4 Flp pilus assembly protein TadB compare
ABIE53_001225 -1.4 -3.6 LysR family cys regulon transcriptional activator compare
ABIE53_000383 -1.3 -1.3 DNA invertase Pin-like site-specific DNA recombinase compare
ABIE53_001555 -1.3 -3.8 K+-transporting ATPase ATPase C chain compare
ABIE53_003418 -1.3 -5.4 two-component system response regulator QseB compare
ABIE53_001135 -1.3 -0.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
ABIE53_006167 -1.3 -1.1 hyperosmotically inducible protein compare
ABIE53_001317 -1.3 -4.1 HemY protein compare
ABIE53_004007 -1.3 -1.1 hypothetical protein compare
ABIE53_003517 -1.3 -2.9 phosphogluconate dehydratase compare
ABIE53_001572 -1.3 -2.7 hypothetical protein compare
ABIE53_002496 -1.3 -2.6 regulator of sigma E protease compare
ABIE53_001416 -1.3 -3.3 transaldolase compare
ABIE53_004304 -1.3 -5.6 putative membrane protein compare
ABIE53_001011 -1.3 -1.6 hypothetical protein compare
ABIE53_003588 -1.3 -0.9 glutamate 5-kinase compare
ABIE53_005554 -1.3 -1.0 AcrR family transcriptional regulator compare
ABIE53_003815 -1.3 -0.9 tRNA-Arg compare
ABIE53_002056 -1.3 -4.8 lipoprotein NlpD compare
ABIE53_004303 -1.3 -3.7 choline kinase compare
ABIE53_006538 -1.3 -1.8 N-hydroxyarylamine O-acetyltransferase compare
ABIE53_001148 -1.3 -1.9 glycosyltransferase involved in cell wall biosynthesis compare
ABIE53_004960 -1.3 -3.5 RNA polymerase primary sigma factor compare
ABIE53_006376 -1.3 -0.9 protein TonB compare
ABIE53_004249 -1.2 -2.6 nitroreductase compare
ABIE53_003531 -1.2 -0.8 Fur family ferric uptake transcriptional regulator compare
ABIE53_005307 -1.2 -1.4 catechol 2,3-dioxygenase-like lactoylglutathione lyase family enzyme compare
ABIE53_000031 -1.2 -6.6 hypothetical protein compare
ABIE53_004844 -1.2 -6.8 hypothetical protein compare
ABIE53_006271 -1.2 -1.6 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) compare
ABIE53_003688 -1.2 -1.5 sec-independent protein translocase protein TatC compare
ABIE53_001155 -1.2 -5.9 lipopolysaccharide transport system ATP-binding protein compare
ABIE53_003955 -1.2 -2.1 polar amino acid transport system substrate-binding protein compare
ABIE53_002746 -1.2 -2.7 modulator of FtsH protease compare
ABIE53_003511 -1.2 -0.8 glutamate dehydrogenase (NAD(P)+) compare
ABIE53_002528 -1.2 -0.8 LPLT family lysophospholipid transporter-like MFS transporter compare
ABIE53_004761 -1.2 -4.1 2-methylcitrate synthase compare
ABIE53_002100 -1.2 -5.3 two-component system osmolarity sensor histidine kinase EnvZ compare
ABIE53_003148 -1.2 -3.3 UDPglucose 6-dehydrogenase compare
ABIE53_002114 -1.2 -4.9 trigger factor compare
ABIE53_003660 -1.2 -1.6 hypothetical protein compare
ABIE53_004087 -1.2 -2.1 two-component system phosphate regulon response regulator PhoB compare
ABIE53_004044 -1.2 -1.8 putative DsbA family dithiol-disulfide isomerase compare
ABIE53_004259 -1.2 -0.8 hypothetical protein compare
ABIE53_002004 -1.2 -2.5 anti-sigma factor RsiW compare
ABIE53_001143 -1.2 -3.3 GT2 family glycosyltransferase compare
ABIE53_001374 -1.2 -2.3 hypothetical protein compare
ABIE53_004034 -1.2 -1.4 hypothetical protein compare
ABIE53_000201 -1.2 -1.3 hypothetical protein compare
ABIE53_001575 -1.2 -0.9 acetolactate synthase-1/3 small subunit compare
ABIE53_002893 -1.2 -2.0 DNA-binding transcriptional LysR family regulator compare
ABIE53_004233 -1.2 -1.3 PII-like signaling protein compare
ABIE53_005251 -1.2 -2.8 ADP-heptose:LPS heptosyltransferase compare
ABIE53_002032 -1.2 -2.3 Rrf2 family nitric oxide-sensitive transcriptional repressor compare
ABIE53_001538 -1.2 -2.6 ribonuclease G compare
ABIE53_006154 -1.2 -1.1 DNA-binding transcriptional LysR family regulator compare
ABIE53_001232 -1.2 -1.1 sirohydrochlorin cobaltochelatase compare
ABIE53_003304 -1.2 -1.5 dUTP pyrophosphatase compare
ABIE53_005874 -1.2 -1.0 protease I compare
ABIE53_002512 -1.1 -6.4 FtsZ-interacting cell division protein ZipA compare
ABIE53_000412 -1.1 -6.2 PAT family beta-lactamase induction signal transducer AmpG compare
ABIE53_004499 -1.1 -1.9 RpiR family carbohydrate utilization transcriptional regulator compare


Specific Phenotypes

For 3 genes in this experiment

For stress Sodium Chloride in Paraburkholderia graminis OAS925

For stress Sodium Chloride across organisms