Experiment set18IT082 for Pseudomonas stutzeri RCH2

Compare to:

Ionizing radiation, 0 Gy

200 most important genes:

  gene name fitness t score description  
Psest_0309 -2.7 -1.4 RND family efflux transporter, MFP subunit compare
Psest_1012 -2.1 -3.4 Signal transduction histidine kinase compare
Psest_0536 -2.0 -5.8 thiamine-phosphate pyrophosphorylase compare
Psest_0334 -2.0 -4.8 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0267 -2.0 -8.1 Uncharacterized enzyme of thiazole biosynthesis compare
Psest_0498 -1.9 -1.0 ribosome small subunit-dependent GTPase A compare
Psest_3226 -1.9 -1.3 Predicted membrane protein compare
Psest_2945 -1.9 -1.9 septum site-determining protein MinC compare
Psest_1496 -1.8 -0.9 Holliday junction DNA helicase, RuvA subunit compare
Psest_3039 -1.8 -1.4 periplasmic nitrate reductase, NapE protein compare
Psest_3476 -1.7 -2.2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1115 -1.7 -1.3 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_0266 -1.7 -3.4 thiamine biosynthesis protein ThiS compare
Psest_1505 -1.6 -1.6 Organic radical activating enzymes compare
Psest_0277 -1.4 -2.2 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Psest_0193 -1.4 -1.5 conserved hypothetical protein compare
Psest_3518 -1.4 -1.6 Transcriptional regulators compare
Psest_3647 -1.4 -1.3 Indole-3-glycerol phosphate synthase compare
Psest_0537 -1.4 -1.6 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
Psest_3377 -1.4 -1.7 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_2566 -1.3 -1.3 Uncharacterized protein conserved in bacteria compare
Psest_3735 -1.3 -2.4 uncharacterized domain 1 compare
Psest_1663 -1.3 -3.1 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_1679 -1.3 -2.2 ribonuclease, Rne/Rng family compare
Psest_2907 -1.3 -1.5 Protein of unknown function (DUF3618). compare
Psest_0316 -1.2 -3.6 Cytochrome c556 compare
Psest_1920 -1.2 -1.1 Uncharacterized protein conserved in bacteria compare
Psest_3884 -1.2 -0.7 Signal transduction histidine kinase compare
Psest_2764 -1.2 -0.8 hypothetical protein compare
Psest_3904 -1.2 -2.0 hypothetical protein compare
Psest_2584 -1.2 -4.2 Phosphoribosylanthranilate isomerase compare
Psest_2651 -1.2 -1.3 DNA topoisomerase I, bacterial compare
Psest_1837 -1.1 -4.3 Endoglucanase compare
Psest_2358 -1.1 -2.3 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_3562 -1.1 -2.5 ABC-type antimicrobial peptide transport system, ATPase component compare
Psest_2001 -1.1 -1.0 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_3458 -1.1 -2.1 hypothetical protein compare
Psest_0485 -1.1 -2.1 clan AA aspartic protease, TIGR02281 family compare
Psest_1511 -1.1 -2.8 Predicted redox protein, regulator of disulfide bond formation compare
Psest_3231 -1.0 -1.5 hypothetical protein compare
Psest_0020 -1.0 -2.8 K+ transport systems, NAD-binding component compare
Psest_0299 -1.0 -3.5 Chemotaxis signal transduction protein compare
Psest_0547 -1.0 -2.9 Urease accessory protein UreF compare
Psest_3767 -1.0 -2.1 tyrosine recombinase XerC compare
Psest_0094 -1.0 -1.6 Uncharacterized enzyme of phosphonate metabolism compare
Psest_2333 -1.0 -0.6 Protein of unknown function (DUF3359). compare
Psest_3148 -1.0 -1.2 hypothetical protein compare
Psest_1617 -1.0 -1.9 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_1463 -1.0 -0.6 SufE protein probably involved in Fe-S center assembly compare
Psest_1516 -0.9 -1.6 Uncharacterized lipoprotein compare
Psest_3527 -0.9 -3.1 Pseudouridylate synthases, 23S RNA-specific compare
Psest_2110 -0.9 -1.9 hypothetical protein compare
Psest_3177 -0.9 -1.6 hypothetical protein compare
Psest_1357 -0.9 -2.4 Uncharacterized protein conserved in bacteria compare
Psest_2530 -0.9 -2.6 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_0592 -0.9 -2.2 hypothetical protein compare
Psest_1162 -0.9 -1.0 Spermidine synthase compare
Psest_2101 -0.9 -1.6 hypothetical protein compare
Psest_0141 -0.9 -3.1 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain compare
Psest_2022 -0.9 -2.5 ADP-ribose pyrophosphatase compare
Psest_3860 -0.9 -2.1 Predicted permeases compare
Psest_3828 -0.9 -1.0 zinc-binding alcohol dehydrogenase family protein compare
Psest_4003 -0.9 -2.6 TIGR00153 family protein compare
Psest_2768 -0.9 -2.1 Kef-type K+ transport systems, predicted NAD-binding component compare
Psest_4315 -0.8 -1.6 ABC-type metal ion transport system, permease component compare
Psest_2457 -0.8 -2.7 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) compare
Psest_1824 -0.8 -1.8 Sugar transferases involved in lipopolysaccharide synthesis compare
Psest_1532 -0.8 -1.8 DNA recombination-dependent growth factor C compare
Psest_4082 -0.8 -2.3 hypothetical protein compare
Psest_3183 -0.8 -3.4 hypothetical protein compare
Psest_4170 -0.8 -1.5 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_1665 -0.8 -3.2 hypothetical protein compare
Psest_2015 -0.8 -2.5 Type II secretory pathway, component PulD compare
Psest_1167 -0.8 -0.7 hypothetical protein compare
Psest_0186 -0.8 -2.7 Protein-disulfide isomerase compare
Psest_0790 -0.8 -2.8 Uncharacterized protein conserved in bacteria compare
Psest_3908 -0.8 -1.0 Cytochrome c553 compare
Psest_3816 -0.8 -0.8 DNA-directed RNA polymerase, omega subunit compare
Psest_1315 -0.7 -1.4 hypothetical protein compare
Psest_0401 -0.7 -1.6 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_1695 -0.7 -2.4 Tfp pilus assembly protein PilZ compare
Psest_0678 -0.7 -2.4 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_0691 -0.7 -4.7 ribonuclease R compare
Psest_0393 -0.7 -2.9 Methylase of chemotaxis methyl-accepting proteins compare
Psest_1963 -0.7 -1.6 Peptidase inhibitor I78 family. compare
Psest_4067 -0.7 -2.1 Predicted membrane protein compare
Psest_1750 -0.7 -1.8 Protein of unknown function (DUF2802). compare
Psest_2265 -0.7 -2.2 Outer membrane protein compare
Psest_0601 -0.7 -1.2 hypothetical protein compare
Psest_3721 -0.7 -3.5 Malic enzyme compare
Psest_3881 -0.7 -1.0 hypothetical protein compare
Psest_1814 -0.7 -4.7 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_0093 -0.7 -1.3 Uncharacterized enzyme of phosphonate metabolism compare
Psest_3060 -0.7 -1.9 hypothetical protein compare
Psest_1574 -0.7 -1.8 phenazine biosynthesis protein PhzF family compare
Psest_3766 -0.7 -1.2 Uncharacterized protein conserved in bacteria compare
Psest_0170 -0.7 -3.1 5,10-methenyltetrahydrofolate synthetase compare
Psest_3174 -0.7 -4.8 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Psest_3648 -0.7 -1.9 anthranilate phosphoribosyltransferase compare
Psest_2539 -0.7 -2.2 adenine phosphoribosyltransferase compare
Psest_1888 -0.7 -0.7 Sua5/YciO/YrdC/YwlC family protein compare
Psest_1958 -0.7 -2.4 Glutaredoxin-like domain (DUF836). compare
Psest_1132 -0.7 -2.0 mutator mutT protein compare
Psest_1879 -0.7 -1.0 Trk-type K+ transport systems, membrane components compare
Psest_3910 -0.7 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_2630 -0.7 -2.1 hypothetical protein compare
Psest_1542 -0.7 -3.2 Uncharacterized proteins, homologs of lactam utilization protein B compare
Psest_3197 -0.7 -2.4 hypothetical protein compare
Psest_0795 -0.7 -2.1 ABC-type multidrug transport system, ATPase component compare
Psest_2177 -0.7 -1.6 Protein of unknown function (DUF1652). compare
Psest_3494 -0.6 -1.3 hypothetical protein compare
Psest_3191 -0.6 -1.7 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases compare
Psest_4396 -0.6 -3.4 Site-specific recombinases, DNA invertase Pin homologs compare
Psest_2323 -0.6 -3.8 Uncharacterized protein conserved in archaea compare
Psest_0100 -0.6 -1.9 phosphonate ABC transporter, ATP-binding protein compare
Psest_4158 -0.6 -1.0 Flagellar motor protein compare
Psest_0368 -0.6 -1.7 Transcriptional regulator compare
Psest_2090 -0.6 -1.4 Protein of unknown function (DUF2970). compare
Psest_0785 -0.6 -1.6 Thioredoxin reductase compare
Psest_4219 -0.6 -0.7 DNA polymerase I compare
Psest_2442 -0.6 -1.1 hypothetical protein compare
Psest_2671 -0.6 -1.7 Transcriptional regulator compare
Psest_1065 -0.6 -1.2 hypothetical protein compare
Psest_0260 -0.6 -0.8 Cell division protein compare
Psest_1660 -0.6 -0.8 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_1724 -0.6 -1.8 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_4049 -0.6 -1.2 hypothetical protein compare
Psest_1139 -0.6 -2.5 PAS domain S-box compare
Psest_4298 -0.6 -0.5 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_0083 -0.6 -1.1 Uncharacterized conserved protein compare
Psest_1241 -0.6 -2.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
Psest_2324 -0.6 -3.9 hypothetical protein compare
Psest_1909 -0.6 -1.4 Phosphohistidine phosphatase SixA compare
Psest_1451 -0.6 -1.1 Uncharacterized ABC-type transport system, permease components compare
Psest_0113 -0.6 -1.3 Uncharacterized protein conserved in bacteria compare
Psest_3958 -0.6 -1.5 Predicted Fe-S-cluster oxidoreductase compare
Psest_3400 -0.6 -1.0 Copper resistance protein D. compare
Psest_3784 -0.6 -1.2 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_4126 -0.6 -1.1 Predicted peroxiredoxins compare
Psest_0789 -0.6 -2.6 hypothetical protein compare
Psest_4363 -0.6 -2.9 ATPases involved in chromosome partitioning compare
Psest_3991 -0.6 -1.7 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) compare
Psest_3687 -0.6 -3.3 hypothetical protein compare
Psest_4316 -0.6 -2.0 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Psest_1913 -0.6 -1.6 Transcriptional regulator compare
Psest_1613 -0.6 -1.9 hypothetical protein compare
Psest_2480 -0.6 -2.0 Methyl-accepting chemotaxis protein compare
Psest_1598 -0.6 -1.6 heavy metal response regulator compare
Psest_0272 -0.6 -3.1 arginine deiminase compare
Psest_4364 -0.6 -1.7 16S rRNA (guanine(527)-N(7))-methyltransferase GidB compare
Psest_2430 -0.5 -3.1 AraC-type DNA-binding domain-containing proteins compare
Psest_4366 -0.5 -2.2 Multisubunit Na+/H+ antiporter, MnhG subunit compare
Psest_1259 -0.5 -1.9 23S rRNA m2A2503 methyltransferase compare
Psest_2622 -0.5 -1.6 TadE-like protein. compare
Psest_1619 -0.5 -2.0 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 compare
Psest_1163 -0.5 -1.9 diguanylate cyclase (GGDEF) domain compare
Psest_2253 -0.5 -1.1 small redox-active disulfide protein 2 compare
Psest_2173 -0.5 -1.8 competence/damage-inducible protein CinA C-terminal domain compare
Psest_4042 -0.5 -0.8 hypothetical protein compare
Psest_2018 -0.5 -0.8 Uncharacterized conserved protein compare
Psest_3865 -0.5 -1.9 Predicted integral membrane protein (DUF2269). compare
Psest_0444 -0.5 -2.1 methionine-S-sulfoxide reductase compare
Psest_0294 -0.5 -1.6 Putative transcriptional regulator compare
Psest_3199 -0.5 -2.5 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Psest_2850 -0.5 -0.5 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_0172 -0.5 -2.3 Uncharacterized protein conserved in bacteria compare
Psest_0231 -0.5 -1.7 phosphoesterase, MJ0936 family compare
Psest_0992 -0.5 -2.2 Uncharacterized protein conserved in bacteria compare
Psest_2743 -0.5 -1.2 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_3021 -0.5 -2.3 NAD-dependent protein deacetylases, SIR2 family compare
Psest_3752 -0.5 -1.7 hypothetical protein compare
Psest_3209 -0.5 -2.0 NADH:flavin oxidoreductases, Old Yellow Enzyme family compare
Psest_3069 -0.5 -0.6 3-oxoadipate enol-lactonase compare
Psest_2762 -0.5 -1.2 hypothetical protein compare
Psest_0118 -0.5 -1.8 Predicted membrane protein compare
Psest_0409 -0.5 -1.4 Putative homoserine kinase type II (protein kinase fold) compare
Psest_2280 -0.5 -1.7 Predicted membrane protein compare
Psest_0281 -0.5 -2.8 Dynamin family. compare
Psest_3383 -0.5 -1.6 Uncharacterized protein conserved in bacteria compare
Psest_4280 -0.5 -0.9 ABC-type spermidine/putrescine transport system, permease component II compare
Psest_0998 -0.5 -1.0 poly(A) polymerase compare
Psest_0856 -0.5 -1.8 Predicted oxidoreductase compare
Psest_2130 -0.5 -1.5 exodeoxyribonuclease III compare
Psest_3437 -0.5 -1.9 diguanylate cyclase (GGDEF) domain compare
Psest_1813 -0.5 -2.6 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_1070 -0.5 -2.5 Predicted membrane protein compare
Psest_2321 -0.5 -2.4 methylisocitrate lyase compare
Psest_1001 -0.5 -1.3 hypothetical protein compare
Psest_2327 -0.5 -2.7 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein compare
Psest_3449 -0.5 -1.3 DJ-1 family protein compare
Psest_1595 -0.5 -0.6 Copper chaperone compare
Psest_2455 -0.5 -2.4 Acyl-CoA thioesterase compare
Psest_0952 -0.5 -1.2 Uncharacterized conserved protein compare
Psest_3077 -0.5 -1.1 Protein of unknown function (DUF3203). compare
Psest_2322 -0.5 -1.3 Transcriptional regulators compare
Psest_4001 -0.5 -2.2 acetylornithine deacetylase (ArgE) compare
Psest_3890 -0.5 -0.6 Multisubunit Na+/H+ antiporter, MnhB subunit compare
Psest_4310 -0.5 -0.4 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_1434 -0.5 -1.2 NADPH:quinone reductase and related Zn-dependent oxidoreductases compare
Psest_4221 -0.5 -1.2 homoserine kinase, Neisseria type compare


Specific Phenotypes

For 1 genes in this experiment

For radiation Ionizing radiation in Pseudomonas stutzeri RCH2

For radiation Ionizing radiation across organisms