Experiment set18IT067 for Sinorhizobium meliloti 1021

Compare to:

R2A-HEPES control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMc02766 -5.8 -14.0 tryptophan synthase subunit beta compare
SMc00236 -5.8 -5.6 Indole-3-glycerol phosphate synthase compare
SMc00235 -5.8 -5.6 anthranilate phosphoribosyltransferase compare
SMc02767 -5.6 -8.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMa1635 -5.2 -2.0 hypothetical protein compare
SMc02765 -4.7 -12.5 tryptophan synthase subunit alpha compare
SM_b20810 -4.5 -25.1 membrane-located cell surface saccharide acetylase compare
SMc01881 -4.2 -4.1 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02725 -4.1 -11.9 anthranilate synthase compare
SMc00017 -4.0 -1.9 homoserine kinase compare
SMc02570 -3.0 -8.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc01880 -2.9 -3.3 pantoate--beta-alanine ligase compare
SMc01004 -2.8 -13.7 phosphoribosyl-AMP cyclohydrolase compare
SMc02569 -2.6 -6.4 imidazole glycerol phosphate synthase subunit HisF compare
SMc02572 -2.5 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
SMc00918 -2.4 -9.8 ATP phosphoribosyltransferase regulatory subunit compare
SMc02246 -2.4 -1.2 hypothetical protein compare
SMc00917 -2.4 -6.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00067 -2.2 -9.1 outer-membranne lipoprotein compare
SMc00963 -2.2 -2.5 hypothetical protein compare
SMc02753 -2.1 -1.4 PTS system transporter subunit IIA compare
SMc02307 -2.1 -8.8 histidinol dehydrogenase compare
SMc01222 -1.9 -6.5 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01441 -1.9 -6.5 membrane bound protease compare
SMc01206 -1.8 -1.8 queuine tRNA-ribosyltransferase compare
SMc02232 -1.8 -2.5 hypothetical protein compare
SMc01147 -1.8 -1.7 coproporphyrinogen III oxidase compare
SMc00412 -1.7 -5.1 orotidine 5'-phosphate decarboxylase compare
SMc00450 -1.7 -1.1 protoheme IX farnesyltransferase compare
SMc04246 -1.6 -2.4 transmembrane signal peptide protein compare
SMc01242 -1.6 -1.6 signal peptide protein compare
SMc00876 -1.6 -3.4 ATP-binding MRP protein compare
SMc01120 -1.5 -3.9 hypothetical protein compare
SMc02574 -1.5 -4.1 imidazoleglycerol-phosphate dehydratase compare
SM_b20809 -1.5 -4.0 arabinose-5-phosphate isomerase compare
SMc03069 -1.5 -2.7 6-phosphogluconolactonase compare
SMc02510 -1.5 -0.9 ferric uptake regulation protein compare
SMc00361 -1.5 -2.7 hypothetical protein compare
SMc02165 -1.5 -6.5 orotate phosphoribosyltransferase compare
SMc00619 -1.4 -1.6 hypothetical protein compare
SMc03070 -1.4 -4.5 glucose-6-phosphate 1-dehydrogenase compare
SM_b20307 -1.4 -0.9 dihydroxyacetone kinase compare
SM_b20294 -1.4 -1.7 transcriptional regulator NanR compare
SMc03159 -1.4 -2.4 ABC transporter ATP-binding protein compare
SMc02435 -1.4 -1.1 methyltransferase compare
SMc01440 -1.4 -5.1 hydrolase serine protease transmembrane protein compare
SMc01361 -1.4 -2.6 dihydroorotase compare
SMc02050 -1.3 -2.5 trigger factor compare
SMc02145 -1.3 -0.9 signal peptide protein compare
SMc04432 -1.3 -4.2 hypothetical protein compare
SMc02166 -1.3 -6.9 dihydroorotase compare
SMc03763 -1.3 -1.2 cytosine-specific methyltransferase compare
SM_b20814 -1.3 -7.5 hypothetical protein compare
SMc01153 -1.3 -1.3 enoyl-CoA hydratase compare
SMc01223 -1.3 -3.1 transcriptional regulator compare
SMc00821 -1.3 -1.9 hypothetical protein compare
SMc03128 -1.3 -3.3 ABC transporter permease compare
SMc02867 -1.2 -2.4 multidrug-efflux system transmembrane protein compare
SMc04327 -1.2 -1.3 hypothetical protein compare
SMc01438 -1.2 -3.3 protease precursor signal peptide protein compare
SMa2289 -1.2 -1.4 hypothetical protein compare
SMc00013 -1.2 -1.9 cytochrome C oxidase subunit III transmembrane protein compare
SM_b21177 -1.2 -4.8 phosphate uptake ABC transporter ATP-binding protein compare
SMc00293 -1.2 -5.3 homoserine dehydrogenase compare
SMc02052 -1.2 -1.2 hypothetical protein compare
SMc02266 -1.1 -1.9 hypothetical protein compare
SMc03839 -1.1 -1.3 hypothetical protein compare
SMc04221 -1.1 -3.0 hypothetical protein compare
SMc01613 -1.1 -3.2 ribose-5-phosphate isomerase B compare
SMc02287 -1.1 -2.3 DNA-invertase compare
SMc04213 -1.1 -1.5 diacylglycerol kinase compare
SMc00416 -1.1 -5.2 hypothetical protein compare
SMc02245 -1.1 -4.6 dihydroorotate dehydrogenase 2 compare
SMc02102 -1.1 -2.5 hypothetical protein compare
SMc04454 -1.1 -3.9 ABC transporter ATP-binding protein compare
SMc01858 -1.1 -1.0 S-adenosyl-methyltransferase MraW compare
SMc02897 -1.1 -1.5 cytochrome C transmembrane protein compare
SMc01569 -1.1 -0.5 carbamoyl phosphate synthase small subunit compare
SMc02521 -1.1 -2.9 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc01929 -1.1 -2.1 hypothetical protein compare
SMc04348 -1.1 -2.2 transcriptional regulator compare
SMa0144 -1.0 -0.9 hypothetical protein compare
SMc01606 -1.0 -4.5 permease compare
SMc04346 -1.0 -3.4 ketol-acid reductoisomerase compare
SM_b20994 -1.0 -2.4 hypothetical protein compare
SMa1367 -1.0 -2.7 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc03066 -1.0 -1.7 hypothetical protein compare
SMc02385 -1.0 -2.1 hypothetical protein compare
SMc00579 -1.0 -2.2 dimethyladenosine transferase compare
SMc00451 -1.0 -4.7 processing protease compare
SMc02449 -1.0 -1.6 acetyltransferase compare
SMa1770 -1.0 -1.2 hypothetical protein compare
SMc01607 -1.0 -4.4 permease compare
SMc02906 -1.0 -1.0 hypothetical protein compare
SMc03826 -1.0 -1.0 argininosuccinate synthase compare
SM_b20219 -0.9 -3.3 response regulator protein compare
SM_b20105 -0.9 -1.6 transcriptional regulator compare
SMc04401 -0.9 -2.4 transcriptional regulator compare
SMc03158 -0.9 -1.7 ABC transporter permease compare
SMc01605 -0.9 -4.3 periplasmic binding ABC transporter protein compare
SMa5010 -0.9 -1.2 hypothetical protein compare
SMc02909 -0.9 -0.9 transglycosylase transmembrane protein compare
SMc01765 -0.9 -1.2 hypothetical protein compare
SM_b21224 -0.9 -3.7 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase compare
SMc03978 -0.9 -1.0 transketolase compare
SMc02058 -0.9 -2.1 YAJC protein compare
SMc00010 -0.9 -0.8 cytochrome C oxidase polypeptide I transmembrane protein compare
SMa0846 -0.9 -1.2 transposase, fragment compare
SM_b20752 -0.9 -4.8 3-hydroxyisobutyryl-CoA hydrolase compare
SM_b21669 -0.9 -1.5 hypothetical protein compare
SMa1201 -0.9 -1.4 hypothetical protein compare
SMa1323 -0.9 -1.8 Transcription regulator compare
SMc00091 -0.9 -6.4 sulfate adenylyltransferase compare
SM_b21175 -0.9 -2.5 phosphate uptake ABC transporter permease compare
SMa0520 -0.9 -3.7 RpiR family transcriptional regulator compare
SMc02861 -0.9 -1.7 phosphate transporter compare
SMa5024 -0.9 -2.4 hypothetical protein compare
SM_b20880 -0.9 -4.0 ATP-dependent RNA helicase compare
SMc00131 -0.9 -5.7 transcriptional regulator compare
SMc02543 -0.8 -3.2 hypothetical protein compare
SMa0190 -0.8 -3.1 transcriptional regulator compare
SM_b20270 -0.8 -2.3 proline racemase compare
SMc02451 -0.8 -1.1 hypothetical protein compare
SMa1002 -0.8 -1.5 hypothetical protein compare
SMc00981 -0.8 -3.4 ferredoxin protein compare
SMc00641 -0.8 -3.8 D-3-phosphoglycerate dehydrogenase compare
SM_b21633 -0.8 -1.1 enoyl-CoA hydratase compare
SMc04189 -0.8 -2.2 hypothetical protein compare
SMc01522 -0.8 -1.1 hypothetical protein compare
SMc03127 -0.8 -1.0 ABC transporter permease compare
SMc00099 -0.8 -2.1 alkylphosphonate uptake protein compare
SMc04224 -0.8 -1.3 hypothetical protein compare
SMc03124 -0.8 -2.0 periplasmic binding ABC transporter protein compare
SMc01036 -0.8 -2.0 hypothetical protein compare
SMc02450 -0.8 -1.0 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
SM_b20823 -0.8 -4.2 cell surface saccharide synthesis protein compare
SM_b20691 -0.8 -2.0 hypothetical protein compare
SMc00351 -0.8 -1.1 hypothetical protein compare
SMc01417 -0.8 -3.0 hypothetical protein compare
SMa1765 -0.8 -0.9 hypothetical protein compare
SMc01124 -0.8 -3.7 PII uridylyl-transferase compare
SM_b21182 -0.8 -4.6 hypothetical protein compare
SMc01494 -0.7 -5.1 phosphoserine phosphatase compare
SMa0674 -0.7 -0.9 hypothetical protein compare
SMc00353 -0.7 -1.7 transmembrane protein compare
SMc00088 -0.7 -0.9 hypothetical protein compare
SMc03157 -0.7 -4.4 outer membrane lipoprotein transmembrane compare
SMc02201 -0.7 -2.7 hypothetical protein compare
SM_b20313 -0.7 -3.8 glycerone kinase compare
SMc01374 -0.7 -3.5 hypothetical protein compare
SMc02862 -0.7 -3.9 Pit accessory protein compare
SMc02755 -0.7 -2.9 S-adenosyl-L-homocysteine hydrolase compare
SMc01041 -0.7 -2.3 NIFR3-like protein compare
SMc00514 -0.7 -1.4 monooxygenase compare
SMc02886 -0.7 -1.9 signal peptide protein compare
SMa0112 -0.7 -2.1 hypothetical protein compare
SMa0189 -0.7 -1.4 hypothetical protein compare
SMc02833 -0.7 -0.8 penicillin-insensitive murein endopeptidase compare
SMc00492 -0.7 -0.5 hypothetical protein compare
SMa5007 -0.7 -1.8 transcriptional regulator compare
SMc03899 -0.7 -0.9 hypothetical protein compare
SM_b21035 -0.7 -2.2 hypothetical protein compare
SMc01428 -0.7 -1.6 cold shock transcription regulator protein compare
SMc00075 -0.7 -3.3 ribosomal-protein-alanine acetyltransferase compare
SMc02051 -0.7 -0.9 hypothetical protein compare
SMc01471 -0.7 -1.6 cytochrome C oxidase assembly factor transmembrane protein compare
SMa5033 -0.7 -0.8 hypothetical protein compare
SMa0052 -0.7 -2.8 hypothetical protein compare
SMc00085 -0.7 -2.9 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMc02137 -0.7 -2.2 ornithine carbamoyltransferase compare
SMc01933 -0.7 -1.2 hypothetical protein compare
SMc02227 -0.7 -3.2 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SMa0861 -0.7 -2.0 transposase, fragment compare
SMc03844 -0.7 -2.1 hypothetical protein compare
SMc04026 -0.7 -4.4 glutamate synthase compare
SMc01589 -0.7 -2.5 hypothetical protein compare
SMc04866 -0.6 -1.9 hypothetical protein compare
SMc04045 -0.6 -3.1 dihydroxy-acid dehydratase compare
SMc02582 -0.6 -1.6 hypothetical protein compare
SMc05015 -0.6 -1.5 recombinase compare
SMc00495 -0.6 -2.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SM_b20290 -0.6 -2.3 transcriptional regulator compare
SMc01622 -0.6 -2.8 oxidoreductase compare
SMc02983 -0.6 -3.0 ornithine, DAP, or arginine decarboxylase compare
SMc00090 -0.6 -3.5 sulfate adenylyltransferase compare
SMc02685 -0.6 -1.4 hypothetical protein compare
SMc00914 -0.6 -1.8 oxidoreductase compare
SM_b21021 -0.6 -3.0 transcriptional regulator compare
SMc01800 -0.6 -0.4 cytochrome C oxidase assembly transmembrane protein compare
SMc02520 -0.6 -3.5 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SM_b20955 -0.6 -1.9 endo-beta-1,3-1,4-glycanase compare
SMa0281 -0.6 -3.0 MerR family transcriptional regulator compare
SMc03923 -0.6 -4.0 glucose-1-phosphate adenylyltransferase compare
SMc01368 -0.6 -2.6 transport transmembrane protein compare
SMc01608 -0.6 -2.6 ABC transporter ATP-binding protein compare
SMa0106 -0.6 -1.9 ABC transporter permease compare
SMc04028 -0.6 -5.0 glutamate synthase compare
SMc03924 -0.6 -3.2 glycogen synthase compare
SM_b20725 -0.6 -0.8 hypothetical protein compare
SM_b20773 -0.6 -1.4 GntR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a-hepes control experiments