Experiment set18IT065 for Sinorhizobium meliloti 1021

Compare to:

R2A-HEPES control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMc02766 -6.4 -11.5 tryptophan synthase subunit beta compare
SMc00236 -6.3 -4.3 Indole-3-glycerol phosphate synthase compare
SMc02767 -5.8 -7.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
SM_b20810 -5.2 -25.5 membrane-located cell surface saccharide acetylase compare
SMa1635 -5.1 -2.0 hypothetical protein compare
SMc00235 -5.0 -6.8 anthranilate phosphoribosyltransferase compare
SMc02765 -4.8 -10.5 tryptophan synthase subunit alpha compare
SMc02725 -4.7 -10.2 anthranilate synthase compare
SMc00918 -3.8 -11.6 ATP phosphoribosyltransferase regulatory subunit compare
SMc01881 -3.6 -4.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02569 -3.6 -5.1 imidazole glycerol phosphate synthase subunit HisF compare
SMc01880 -3.6 -2.5 pantoate--beta-alanine ligase compare
SMc02570 -3.4 -7.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc01004 -3.3 -13.3 phosphoribosyl-AMP cyclohydrolase compare
SMc02572 -3.2 -8.1 imidazole glycerol phosphate synthase subunit HisH compare
SMc00917 -3.1 -4.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc01222 -2.6 -10.5 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00017 -2.6 -1.4 homoserine kinase compare
SMc00067 -2.4 -8.4 outer-membranne lipoprotein compare
SMc03100 -2.2 -1.8 hypothetical protein compare
SMc03826 -2.1 -1.4 argininosuccinate synthase compare
SMc02909 -1.9 -1.8 transglycosylase transmembrane protein compare
SMc01153 -1.9 -1.7 enoyl-CoA hydratase compare
SMc02307 -1.8 -7.0 histidinol dehydrogenase compare
SMc02897 -1.8 -2.9 cytochrome C transmembrane protein compare
SMc00053 -1.8 -0.9 monovalent cation/H+ antiporter subunit C compare
SMc02886 -1.8 -2.0 signal peptide protein compare
SMc02245 -1.7 -5.2 dihydroorotate dehydrogenase 2 compare
SMc03070 -1.7 -4.7 glucose-6-phosphate 1-dehydrogenase compare
SMc01361 -1.7 -3.5 dihydroorotase compare
SMc02058 -1.7 -4.0 YAJC protein compare
SMc00876 -1.7 -3.3 ATP-binding MRP protein compare
SMc01441 -1.7 -6.2 membrane bound protease compare
SMc02683 -1.7 -1.9 hypothetical protein compare
SMc03229 -1.7 -1.5 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02165 -1.6 -7.4 orotate phosphoribosyltransferase compare
SM_b20413 -1.6 -1.5 hypothetical protein compare
SMc00914 -1.6 -3.5 oxidoreductase compare
SMc04866 -1.6 -2.5 hypothetical protein compare
SMc03836 -1.6 -1.9 acyl-CoA thioesterase i protein compare
SMc02102 -1.6 -2.9 hypothetical protein compare
SMc00361 -1.6 -3.9 hypothetical protein compare
SMc02166 -1.5 -7.6 dihydroorotase compare
SMc00295 -1.5 -1.1 hypothetical protein compare
SMc01206 -1.5 -1.6 queuine tRNA-ribosyltransferase compare
SMc02906 -1.4 -1.2 hypothetical protein compare
SMc03140 -1.4 -4.2 transcriptional regulator compare
SMc02574 -1.4 -3.5 imidazoleglycerol-phosphate dehydratase compare
SMa5010 -1.4 -1.4 hypothetical protein compare
SMc02137 -1.4 -3.7 ornithine carbamoyltransferase compare
SMc02449 -1.4 -2.2 acetyltransferase compare
SMa0753 -1.4 -0.9 hypothetical protein compare
SMc03763 -1.4 -0.9 cytosine-specific methyltransferase compare
SMc02435 -1.4 -1.3 methyltransferase compare
SM_b21175 -1.4 -3.9 phosphate uptake ABC transporter permease compare
SMc00821 -1.4 -1.8 hypothetical protein compare
SM_b20814 -1.4 -7.0 hypothetical protein compare
SMc01223 -1.4 -3.9 transcriptional regulator compare
SMc04432 -1.3 -3.2 hypothetical protein compare
SM_b20809 -1.3 -3.4 arabinose-5-phosphate isomerase compare
SMc00412 -1.3 -3.4 orotidine 5'-phosphate decarboxylase compare
SMc00856 -1.3 -1.2 hypothetical protein compare
SMc01440 -1.3 -5.8 hydrolase serine protease transmembrane protein compare
SMc00963 -1.3 -1.6 hypothetical protein compare
SM_b20880 -1.2 -5.4 ATP-dependent RNA helicase compare
SMc02077 -1.2 -2.2 exodeoxyribonuclease III protein compare
SMc04346 -1.2 -3.9 ketol-acid reductoisomerase compare
SMc00293 -1.2 -4.9 homoserine dehydrogenase compare
SM_b20773 -1.2 -2.1 GntR family transcriptional regulator compare
SMc03850 -1.2 -0.6 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SM_b20294 -1.2 -1.1 transcriptional regulator NanR compare
SMc02050 -1.2 -1.8 trigger factor compare
SMc02145 -1.2 -0.8 signal peptide protein compare
SMc00579 -1.1 -3.9 dimethyladenosine transferase compare
SMc04327 -1.1 -1.2 hypothetical protein compare
SMc03053 -1.1 -1.4 flagellar biosynthesis protein FliQ compare
SMc02055 -1.1 -1.1 phytoene synthase compare
SMc00640 -1.1 -6.3 phosphoserine aminotransferase compare
SMc01438 -1.1 -3.6 protease precursor signal peptide protein compare
SM_b20307 -1.1 -0.7 dihydroxyacetone kinase compare
SMc02266 -1.1 -1.7 hypothetical protein compare
SMc01933 -1.1 -1.7 hypothetical protein compare
SMc00404 -1.1 -1.0 hypothetical protein compare
SMc02755 -1.1 -4.1 S-adenosyl-L-homocysteine hydrolase compare
SMc01119 -1.1 -1.3 hypothetical protein compare
SM_b20282 -1.1 -2.8 spermidine/putrescine ABC transporter permease compare
SMa1002 -1.1 -1.6 hypothetical protein compare
SMc02232 -1.1 -1.9 hypothetical protein compare
SMa1639 -1.1 -1.2 hypothetical protein compare
SMc02582 -1.1 -2.4 hypothetical protein compare
SM_b20752 -1.1 -5.1 3-hydroxyisobutyryl-CoA hydrolase compare
SMc01836 -1.0 -2.3 hypothetical protein compare
SM_b20547 -1.0 -1.7 hypothetical protein compare
SMc02544 -1.0 -0.9 hypothetical protein compare
SMc01569 -1.0 -0.5 carbamoyl phosphate synthase small subunit compare
SMc01613 -1.0 -3.4 ribose-5-phosphate isomerase B compare
SM_b21174 -1.0 -3.0 phosphate uptake ABC transporter permease compare
SMa0776 -1.0 -1.7 TRm23b IS ATP-binding protein compare
SMc04220 -1.0 -1.3 transcriptional regulator compare
SMc03124 -1.0 -2.1 periplasmic binding ABC transporter protein compare
SMa0846 -1.0 -1.2 transposase, fragment compare
SMc03157 -1.0 -6.5 outer membrane lipoprotein transmembrane compare
SMa0740 -1.0 -0.9 hypothetical protein compare
SMc04045 -1.0 -5.2 dihydroxy-acid dehydratase compare
SMc02246 -1.0 -0.7 hypothetical protein compare
SMa0357 -0.9 -4.1 hypothetical protein compare
SMc00013 -0.9 -0.9 cytochrome C oxidase subunit III transmembrane protein compare
SMc02520 -0.9 -4.2 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc01360 -0.9 -1.5 aspartate carbamoyltransferase catalytic subunit compare
SMc02978 -0.9 -2.9 hypothetical protein compare
SMc01494 -0.9 -4.8 phosphoserine phosphatase compare
SMa2151 -0.9 -2.1 DNA-binding protein compare
SM_b21177 -0.9 -4.4 phosphate uptake ABC transporter ATP-binding protein compare
SMc02713 -0.9 -1.0 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc01089 -0.9 -1.2 hypothetical protein compare
SMc00711 -0.9 -2.5 cyclohexadienyl dehydrogenase compare
SMa0520 -0.9 -3.5 RpiR family transcriptional regulator compare
SMa0267 -0.9 -3.3 GntR family transcriptional regulator compare
SMc02989 -0.9 -2.0 hypothetical protein compare
SMc03258 -0.9 -5.0 transcriptional regulator compare
SMc01208 -0.9 -2.0 peptidyl-prolyl cis-trans isomerase B protein compare
SMc03127 -0.9 -1.0 ABC transporter permease compare
SMc04026 -0.9 -4.6 glutamate synthase compare
SMc01144 -0.9 -2.1 ribonuclease PH compare
SM_b21395 -0.9 -1.8 hypothetical protein compare
SMc02287 -0.8 -1.9 DNA-invertase compare
SMc03128 -0.8 -2.4 ABC transporter permease compare
SMc00416 -0.8 -3.9 hypothetical protein compare
SMc00353 -0.8 -1.3 transmembrane protein compare
SMa1960 -0.8 -2.7 hypothetical protein compare
SMc02866 -0.8 -1.4 transcriptional regulator compare
SMc00075 -0.8 -4.4 ribosomal-protein-alanine acetyltransferase compare
SMc00085 -0.8 -3.3 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMc04401 -0.8 -2.6 transcriptional regulator compare
SMc01278 -0.8 -3.6 chaperone-like protein compare
SMa0144 -0.8 -0.7 hypothetical protein compare
SMc00505 -0.8 -1.7 hypothetical protein compare
SMc02362 -0.8 -1.0 cytochrome c-type biogenesis protein CcmE compare
SMc01723 -0.8 -1.5 hypothetical protein compare
SMc01124 -0.8 -3.9 PII uridylyl-transferase compare
SMc04348 -0.8 -1.3 transcriptional regulator compare
SM_b21212 -0.8 -1.7 hypothetical protein compare
SMc03978 -0.8 -0.7 transketolase compare
SMc01606 -0.8 -3.8 permease compare
SMc01120 -0.8 -2.3 hypothetical protein compare
SMc02983 -0.8 -3.1 ornithine, DAP, or arginine decarboxylase compare
SMc03835 -0.8 -2.4 2'-5' RNA ligase compare
SMc02261 -0.8 -2.1 transcriptional regulator compare
SMc04319 -0.8 -1.9 hypothetical protein compare
SM_b22005 -0.8 -1.0 hypothetical protein compare
SMc01607 -0.8 -3.5 permease compare
SMc00641 -0.8 -2.7 D-3-phosphoglycerate dehydrogenase compare
SMc04028 -0.8 -6.3 glutamate synthase compare
SMc01605 -0.8 -3.1 periplasmic binding ABC transporter protein compare
SMc00619 -0.8 -0.9 hypothetical protein compare
SMc00451 -0.8 -2.8 processing protease compare
SMc00091 -0.7 -4.8 sulfate adenylyltransferase compare
SMc00298 -0.7 -2.4 methionine aminopeptidase compare
SMc01187 -0.7 -1.2 rare lipoprotein A compare
SMc01516 -0.7 -1.5 hypothetical protein compare
SMc02862 -0.7 -3.5 Pit accessory protein compare
SMa0190 -0.7 -4.2 transcriptional regulator compare
SMc03093 -0.7 -2.2 hypothetical protein compare
SM_b21480 -0.7 -1.0 hypothetical protein compare
SM_b21669 -0.7 -1.5 hypothetical protein compare
SMc00580 -0.7 -1.3 4-hydroxythreonine-4-phosphate dehydrogenase compare
SM_b20218 -0.7 -2.4 sensor histidine kinase compare
SMa1666 -0.7 -1.9 hypothetical protein compare
SMc03069 -0.7 -1.3 6-phosphogluconolactonase compare
SMa1063 -0.7 -2.6 hypothetical protein compare
SMc04385 -0.7 -2.5 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc02799 -0.7 -1.3 16S rRNA methyltransferase GidB compare
SMc00088 -0.7 -0.9 hypothetical protein compare
SMc02543 -0.7 -2.5 hypothetical protein compare
SMc01930 -0.7 -1.7 hypothetical protein compare
SMc02354 -0.7 -2.8 hypothetical protein compare
SMc04242 -0.7 -1.3 zinc uptake regulation protein compare
SMc00760 -0.7 -1.8 recombinase A compare
SMc01242 -0.7 -0.9 signal peptide protein compare
SMc00188 -0.7 -3.3 cytochrome B transmembrane protein compare
SMc03159 -0.7 -1.2 ABC transporter ATP-binding protein compare
SMc00131 -0.7 -4.7 transcriptional regulator compare
SMc02069 -0.7 -2.1 hypothetical protein compare
SMc04391 -0.7 -0.9 3-ketoacyl-ACP reductase compare
SMc02450 -0.7 -1.0 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
SMc01172 -0.7 -2.7 thiosulfate sulfurtransferase compare
SMc02107 -0.7 -0.8 hypothetical protein compare
SM_b20148 -0.7 -2.2 transcriptional regulator compare
SMc00981 -0.7 -3.2 ferredoxin protein compare
SM_b21035 -0.7 -2.7 hypothetical protein compare
SMc02425 -0.7 -1.7 transcriptional regulator compare
SMc02787 -0.6 -2.1 hypothetical protein compare
SMc01183 -0.6 -0.6 LexA repressor compare
SMa0995 -0.6 -1.9 TRm5 transposase compare
SMc01644 -0.6 -1.3 ABC transporter permease compare
SMc02238 -0.6 -1.2 hypothetical protein compare
SMc00709 -0.6 -1.5 hypothetical protein compare
SM_b21047 -0.6 -2.3 hypothetical protein compare
SMc04428 -0.6 -2.7 hypothetical protein compare
SMa0861 -0.6 -2.2 transposase, fragment compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a-hepes control experiments