Experiment set18IT065 for Sinorhizobium meliloti 1021

Compare to:

R2A-HEPES control for volatile experiments

200 most detrimental genes:

  gene name fitness t score description  
SMc00726 +2.4 1.4 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc02140 +2.1 1.1 phosphate regulon transcriptional regulatory protein compare
SM_b20804 +1.9 13.4 hypothetical protein compare
SMc02142 +1.9 4.4 phosphate transporter ATP-binding protein compare
SM_b20563 +1.7 6.2 hypothetical protein compare
SM_b20803 +1.6 7.0 3-deoxy-manno-octulosonate cytidylyltransferase compare
SMc02147 +1.6 4.8 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02143 +1.5 5.2 phosphate ABC transporter permease compare
SM_b20942 +1.5 7.7 UDP glucose 4-epimerase compare
SM_b20805 +1.4 9.1 glycosyltransferase compare
SM_b20806 +1.3 5.7 hypothetical protein compare
SMc03973 +1.2 9.7 hypothetical protein compare
SMc03967 +1.2 1.6 Holliday junction resolvase compare
SMc00522 +1.2 8.2 ATP-dependent RNA helicase compare
SM_b20562 +1.2 8.4 hypothetical protein compare
SMc01850 +1.1 4.0 hypothetical protein compare
SMa1658 +1.0 1.6 hypothetical protein compare
SMa0854 +1.0 3.3 3-ketoacyl-ACP reductase compare
SMc02141 +1.0 1.8 phosphate transporter PhoU compare
SM_b20808 +1.0 6.7 hypothetical protein compare
SM_b20811 +1.0 4.0 hypothetical protein compare
SMc00496 +1.0 1.8 hypothetical protein compare
SMc00712 +1.0 2.0 hypothetical protein compare
SM_b22023 +1.0 1.7 molecular chaperone GroES compare
SMa0349 +0.9 2.8 hypothetical protein compare
SMc00799 +0.9 3.7 hypothetical protein compare
SM_b21347 +0.9 2.4 pectin degradation protein compare
SMc03123 +0.9 8.0 transcriptional regulator compare
SMc00800 +0.9 1.7 hypothetical protein compare
SMc04094 +0.8 2.9 hypothetical protein compare
SMc02867 +0.8 2.0 multidrug-efflux system transmembrane protein compare
SMc00012 +0.8 1.1 cytochrome C oxidase assembly protein compare
SMc00565 +0.8 1.1 50S ribosomal protein L9 compare
SMc04003 +0.8 1.3 50S ribosomal protein L36 compare
SMa0789 +0.8 2.7 GntR family transcriptional regulator compare
SMa0882 +0.8 1.0 hypothetical protein compare
SMc00804 +0.8 1.8 hypothetical protein compare
SMc02460 +0.7 5.0 hypothetical protein compare
SMc02495 +0.7 1.5 translaldolase compare
SMc00073 +0.7 1.4 hypothetical protein compare
SMc00352 +0.7 1.7 acetyltransferase compare
SMc00802 +0.7 1.0 hypothetical protein compare
SMc02144 +0.7 1.3 phosphate ABC transporter permease compare
SMc01472 +0.7 1.1 50S ribosomal protein L11 methyltransferase compare
SMc01447 +0.7 1.1 hypothetical protein compare
SMa1053 +0.7 1.0 hypothetical protein compare
SMc00334 +0.7 0.7 cytidylate kinase compare
SMc02719 +0.7 0.9 transposase compare
SMc02505 +0.7 0.8 hypothetical protein compare
SM_b20323 +0.6 0.9 transcriptional regulator compare
SMc00667 +0.6 1.6 hypothetical protein compare
SMc01698 +0.6 3.2 oxidoreductase compare
SMc00492 +0.6 0.6 hypothetical protein compare
SMc00656 +0.6 1.2 hypothetical protein compare
SMc03876 +0.6 1.6 HEAT shock-like protein compare
SM_b20221 +0.6 2.7 epoxide hydrolase compare
SMa0581 +0.6 2.3 nitrate ABC transporter ATP-binding protein compare
SM_b20129 +0.6 2.7 transcriptional regulator compare
SMa0132 +0.6 2.1 hypothetical protein compare
SMa1240 +0.6 0.9 NapF ferredoxin component of periplasmic nitrate reductase compare
SM_b20889 +0.6 2.5 hypothetical protein compare
SMc02084 +0.6 0.7 biopolymer transport transmembrane protein compare
SMc02313 +0.6 1.0 hypothetical protein compare
SMc05020 +0.6 0.8 entericidin A precursor compare
SMc01557 +0.6 2.0 signal peptide protein compare
SMa1400 +0.6 1.5 acyl-CoA dehydrogenase compare
SM_b21686 +0.6 2.8 hypothetical protein compare
SMa1176 +0.6 1.9 hypothetical protein compare
SMc03184 +0.6 0.7 PH adaptation potassium efflux system G transmembrane protein compare
SM_b20452 +0.6 1.1 hypothetical protein compare
SMc00461 +0.6 1.0 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc00083 +0.6 3.0 hypothetical protein compare
SMc01671 +0.6 3.7 hypothetical protein compare
SMc02380 +0.6 2.5 oxidoreductase transmembrane protein compare
SMc01203 +0.6 3.3 hypothetical protein compare
SM_b21427 +0.6 3.1 acetyltransferase compare
SMa1321 +0.6 2.8 VirB1 type IV secretion protein compare
SMc03979 +0.5 1.0 glyceraldehyde-3-phosphate dehydrogenase compare
SMc03935 +0.5 3.6 hypothetical protein compare
SM_b21400 +0.5 1.7 hypothetical protein compare
SMc04881 +0.5 1.6 virulence associated protein compare
SM_b20948 +0.5 0.9 glucosyltransferase compare
SM_b21170 +0.5 1.7 guanylate kinase compare
SM_b21265 +0.5 4.0 glycosyltransferase compare
SMc00761 +0.5 3.2 oxidoreductase compare
SMc01573 +0.5 1.3 hypothetical protein compare
SMc02844 +0.5 0.7 transcriptional regulator compare
SMc02892 +0.5 1.7 transporter compare
SMa0714 +0.5 1.8 ABC transporter ATP-binding protein compare
SM_b20398 +0.5 1.7 hypothetical protein compare
SMc00523 +0.5 2.0 hypothetical protein compare
SMc00104 +0.5 2.2 hypothetical protein compare
SMc02504 +0.5 2.8 transcriptional regulator compare
SMa1323 +0.5 0.9 Transcription regulator compare
SMa1018 +0.5 2.6 hypothetical protein compare
SMc02881 +0.5 2.6 hypothetical protein compare
SMa0166 +0.5 2.4 hypothetical protein compare
SM_b20655 +0.5 0.6 hypothetical protein compare
SM_b20812 +0.5 4.2 hypothetical protein compare
SMa0396 +0.5 2.1 ABC transporter permease compare
SM_b21452 +0.5 1.3 hypothetical protein compare
SMa0513 +0.5 1.4 gluconate 5-dehydrogenase compare
SMa1009 +0.5 2.4 Heavy metal binding protein compare
SMc02778 +0.5 0.8 hydroxyacid aldolase compare
SMc02900 +0.5 1.5 hypothetical protein compare
SM_b20758 +0.5 1.2 ArsR family transcriptional regulator compare
SMc04052 +0.5 0.9 transcriptional regulator compare
SMc01241 +0.5 1.3 hypothetical protein compare
SMc00511 +0.5 2.1 D-ribulose-5-phosphate 3-epimerase compare
SM_b20296 +0.5 1.4 permease compare
SMc00129 +0.5 3.1 sensor histidine kinase compare
SM_b21551 +0.5 0.8 hypothetical protein compare
SM_b20625 +0.5 3.1 hypothetical protein compare
SMa2281 +0.5 1.3 hypothetical protein compare
SM_b20613 +0.5 2.6 C4-dicarboxylate transport transcriptional regulator compare
SMa0647 +0.5 1.4 hypothetical protein compare
SMc00340 +0.5 1.4 oxidoreductase compare
SMc02693 +0.5 0.9 peptidyl-tRNA hydrolase compare
SMc00576 +0.5 1.5 hypothetical protein compare
SMa0575 +0.5 1.5 hypothetical protein compare
SM_b20927 +0.5 2.0 hypothetical protein compare
SM_b21218 +0.5 1.9 glucosamine-6-phosphate deaminase, isomerizing (EC 3.5.99.6) (from data) compare
SMc00647 +0.5 1.4 ribosomal large subunit pseudouridine synthase compare
SMa2071 +0.5 2.6 hypothetical protein compare
SMc01908 +0.5 2.7 transcriptional regulator compare
SMc04298 +0.5 1.1 hypothetical protein compare
SMa0852 +0.5 1.8 acyl carrier protein compare
SMc02776 +0.5 2.8 D-arabinoate dehydratase (EC 4.2.1.5); also involved in L-fucose catabolism (from data) compare
SMc02384 +0.5 2.4 glycosyltransferase transmembrane protein compare
SMa0833 +0.5 0.8 hypothetical protein compare
SM_b21428 +0.5 2.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
SMa1245 +0.5 2.0 Crp/fnr-like transcriptional regulator compare
SM_b21677 +0.5 0.9 signal peptide compare
SM_b21524 +0.5 1.2 septum formation inhibitor compare
SMc01112 +0.5 2.4 hypothetical protein compare
SMc03046 +0.5 2.3 transcriptional regulator compare
SM_b21671 +0.5 2.1 hypothetical protein compare
SMa1437 +0.4 2.3 ABC transporter permease compare
SMc01700 +0.4 2.5 peptidyl-prolyl cis-trans isomerase A compare
SM_b21001 +0.4 1.6 hypothetical protein compare
SMc04230 +0.4 2.4 transmembrane signal peptide protein compare
SMa0249 +0.4 0.9 TRAP-type small permease component compare
SMc02640 +0.4 1.7 UDP-glucuronic acid epimerase compare
SMc00419 +0.4 1.2 glutathione synthetase compare
SMc01583 +0.4 2.6 hypothetical protein compare
SM_b20217 +0.4 1.6 hypothetical protein compare
SMc01468 +0.4 0.8 chemotaxis protein compare
SMc01574 +0.4 2.8 hypothetical protein compare
SMc01000 +0.4 1.5 hypothetical protein compare
SMc01727 +0.4 1.4 hypothetical protein compare
SMc02562 +0.4 2.7 phosphoenolpyruvate carboxykinase compare
SMc04174 +0.4 0.7 signal peptide protein compare
SMa1853 +0.4 1.7 hypothetical protein compare
SMc04209 +0.4 2.5 hypothetical protein compare
SM_b20072 +0.4 1.8 rhizopine binding protein compare
SMc00003 +0.4 1.5 chaperone protein compare
SM_b20930 +0.4 2.0 sugar uptake ABC transporter ATP-binding protein compare
SMc00937 +0.4 3.1 TRK system potassium uptake transmembrane protein compare
SMa1058 +0.4 1.4 hypothetical protein compare
SM_b21036 +0.4 1.4 hypothetical protein compare
SMa2020 +0.4 1.8 Transcriptional regulator compare
SMa1279 +0.4 1.6 NorE accessory protein for nitric oxide reductase compare
SMc02497 +0.4 1.3 hypothetical protein compare
SMa0275 +0.4 3.0 hypothetical protein compare
SMa1820 +0.4 2.8 hypothetical protein compare
SM_b20849 +0.4 2.9 guanine deaminase compare
SMc01619 +0.4 1.4 hypothetical protein compare
SMc00650 +0.4 0.9 hypothetical protein compare
SMc03052 +0.4 1.5 flagellar basal body rod modification protein compare
SMa1956 +0.4 2.3 hypothetical protein compare
SM_b20428 +0.4 1.4 amino acid ABC transporter substrate-binding protein compare
SM_b20451 +0.4 1.8 hypothetical protein compare
SMc02609 +0.4 1.8 transcriptional regulator compare
SMc02982 +0.4 1.8 hypothetical protein compare
SM_b20706 +0.4 2.6 amino acid uptake ABC transporter substrate-binding protein precursor compare
SMa0998 +0.4 2.8 ISRm25b transposase compare
SM_b21580 +0.4 0.6 hypothetical protein compare
SMc00024 +0.4 1.6 chromosome partition protein compare
SMa0590 +0.4 2.6 hypothetical protein compare
SMc02486 +0.4 1.5 oxidoreductase compare
SMc02112 +0.4 1.5 hypothetical protein compare
SMa1091 +0.4 2.6 hypothetical protein compare
SMc01705 +0.4 1.6 hypothetical protein compare
SM_b20821 +0.4 2.0 ATPGTP-binding hydroxymethyltransferase compare
SMa0825 +0.4 2.1 nitrogenase reductase compare
SMc05011 +0.4 1.8 bacteriophage DNA-binding transcription regulator compare
SM_b21264 +0.4 2.8 hypothetical protein compare
SMc01724 +0.4 1.1 hypothetical protein compare
SM_b21485 +0.4 1.0 hypothetical protein compare
SMc01615 +0.4 1.3 transcriptional regulator compare
SMc00042 +0.4 2.3 aminotransferase compare
SM_b20454 +0.4 2.5 hypothetical protein compare
SM_b21678 +0.4 1.4 hypothetical protein compare
SMc01145 +0.4 0.8 hypothetical protein compare
SMc04040 +0.4 1.1 heat shock protein compare
SM_b21562 +0.4 1.4 hypothetical protein compare
SMc02695 +0.4 1.7 GTP-dependent nucleic acid-binding protein EngD compare
SMc00252 +0.4 2.0 signal peptide protein compare
SMa2041 +0.4 1.8 oxidoreductase compare
SM_b20366 +0.4 2.1 LacI family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a-hepes control experiments