Experiment set18IT064 for Sinorhizobium meliloti 1021

Compare to:

R2A-HEPES control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMc02766 -6.4 -12.9 tryptophan synthase subunit beta compare
SMc00236 -6.3 -4.4 Indole-3-glycerol phosphate synthase compare
SMc00235 -5.6 -6.6 anthranilate phosphoribosyltransferase compare
SMc02767 -5.5 -8.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02725 -5.2 -12.5 anthranilate synthase compare
SMc02765 -4.8 -11.4 tryptophan synthase subunit alpha compare
SM_b20810 -4.6 -26.6 membrane-located cell surface saccharide acetylase compare
SMc02569 -4.1 -6.2 imidazole glycerol phosphate synthase subunit HisF compare
SMc01881 -4.0 -3.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00917 -3.8 -5.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02572 -3.7 -4.6 imidazole glycerol phosphate synthase subunit HisH compare
SMc00918 -3.6 -12.8 ATP phosphoribosyltransferase regulatory subunit compare
SMc02570 -3.0 -6.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMa1635 -3.0 -2.0 hypothetical protein compare
SMc01880 -2.9 -2.8 pantoate--beta-alanine ligase compare
SMc01004 -2.9 -13.2 phosphoribosyl-AMP cyclohydrolase compare
SMc04327 -2.7 -1.8 hypothetical protein compare
SMc00017 -2.5 -1.8 homoserine kinase compare
SMc00963 -2.4 -2.3 hypothetical protein compare
SMc01222 -2.3 -9.3 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02307 -2.2 -7.9 histidinol dehydrogenase compare
SMc03069 -2.2 -3.6 6-phosphogluconolactonase compare
SMc01360 -2.2 -2.1 aspartate carbamoyltransferase catalytic subunit compare
SMc00067 -2.1 -7.8 outer-membranne lipoprotein compare
SMc01361 -2.1 -3.4 dihydroorotase compare
SMc02137 -2.0 -3.9 ornithine carbamoyltransferase compare
SMc02145 -2.0 -1.1 signal peptide protein compare
SMc02232 -2.0 -2.3 hypothetical protein compare
SMc01427 -2.0 -1.8 hypothetical protein compare
SMc02510 -2.0 -1.0 ferric uptake regulation protein compare
SMc00412 -1.9 -5.4 orotidine 5'-phosphate decarboxylase compare
SMc00619 -1.8 -1.6 hypothetical protein compare
SMc00821 -1.8 -2.2 hypothetical protein compare
SMc02683 -1.7 -1.9 hypothetical protein compare
SMc02574 -1.7 -5.1 imidazoleglycerol-phosphate dehydratase compare
SMc03100 -1.7 -1.4 hypothetical protein compare
SMc03967 -1.6 -1.0 Holliday junction resolvase compare
SMc01024 -1.6 -1.5 preprotein translocase subunit SecG compare
SMc02166 -1.6 -8.1 dihydroorotase compare
SM_b21347 -1.5 -2.2 pectin degradation protein compare
SMc00351 -1.5 -1.8 hypothetical protein compare
SMc01440 -1.5 -5.3 hydrolase serine protease transmembrane protein compare
SMa1700 -1.5 -1.9 hypothetical protein compare
SMc01242 -1.5 -1.6 signal peptide protein compare
SMc03826 -1.4 -1.3 argininosuccinate synthase compare
SMc01441 -1.4 -5.2 membrane bound protease compare
SMc03763 -1.4 -0.9 cytosine-specific methyltransferase compare
SMc02897 -1.4 -1.3 cytochrome C transmembrane protein compare
SMc02165 -1.4 -6.3 orotate phosphoribosyltransferase compare
SMc02647 -1.4 -2.3 transcriptional regulator compare
SM_b20809 -1.3 -3.2 arabinose-5-phosphate isomerase compare
SMc00876 -1.3 -3.2 ATP-binding MRP protein compare
SMc01153 -1.3 -1.2 enoyl-CoA hydratase compare
SMa0431 -1.3 -1.8 hypothetical protein compare
SM_b21177 -1.3 -5.5 phosphate uptake ABC transporter ATP-binding protein compare
SMc02245 -1.3 -3.8 dihydroorotate dehydrogenase 2 compare
SMc00293 -1.3 -4.4 homoserine dehydrogenase compare
SMc04346 -1.3 -4.0 ketol-acid reductoisomerase compare
SM_b20294 -1.2 -1.1 transcriptional regulator NanR compare
SM_b20814 -1.2 -6.3 hypothetical protein compare
SM_b21175 -1.2 -4.2 phosphate uptake ABC transporter permease compare
SMc01613 -1.2 -3.0 ribose-5-phosphate isomerase B compare
SMc02755 -1.2 -4.3 S-adenosyl-L-homocysteine hydrolase compare
SM_b20616 -1.2 -2.6 thiamine biosynthesis oxidoreductase compare
SMc02451 -1.2 -1.2 hypothetical protein compare
SMc00010 -1.2 -0.8 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00709 -1.1 -2.8 hypothetical protein compare
SMc01438 -1.1 -3.9 protease precursor signal peptide protein compare
SMc02753 -1.1 -0.9 PTS system transporter subunit IIA compare
SMc04432 -1.1 -2.7 hypothetical protein compare
SMc04866 -1.1 -2.6 hypothetical protein compare
SMc01223 -1.1 -1.3 transcriptional regulator compare
SMc01501 -1.1 -2.1 mannitol 2-dehydrogenase compare
SMc01608 -1.1 -2.8 ABC transporter ATP-binding protein compare
SMa0267 -1.0 -3.4 GntR family transcriptional regulator compare
SMc03070 -1.0 -3.6 glucose-6-phosphate 1-dehydrogenase compare
SMc00416 -1.0 -6.2 hypothetical protein compare
SMc01206 -1.0 -1.2 queuine tRNA-ribosyltransferase compare
SMc00347 -1.0 -1.8 nucleoside diphosphate kinase regulator compare
SMc04092 -1.0 -1.1 hypothetical protein compare
SMc01569 -1.0 -0.5 carbamoyl phosphate synthase small subunit compare
SMc01723 -1.0 -1.6 hypothetical protein compare
SMa0838 -1.0 -2.5 SyrA protein involved in EPS production compare
SMc00760 -1.0 -2.6 recombinase A compare
SMc00099 -1.0 -2.3 alkylphosphonate uptake protein compare
SMc02050 -1.0 -2.4 trigger factor compare
SMc01765 -1.0 -1.6 hypothetical protein compare
SMc00492 -1.0 -0.6 hypothetical protein compare
SMa0520 -0.9 -3.0 RpiR family transcriptional regulator compare
SMc02886 -0.9 -2.1 signal peptide protein compare
SMc03072 -0.9 -1.6 hypothetical protein compare
SMc04221 -0.9 -3.2 hypothetical protein compare
SM_b20226 -0.9 -0.9 hypothetical protein compare
SM_b21096 -0.9 -1.2 amino acid transporter ABC transporter ATP-binding protein compare
SMc01041 -0.9 -1.9 NIFR3-like protein compare
SMc01124 -0.9 -4.5 PII uridylyl-transferase compare
SM_b20880 -0.9 -5.0 ATP-dependent RNA helicase compare
SM_b21008 -0.9 -3.9 ArsR family transcriptional regulator compare
SMc01726 -0.9 -3.6 acetylglutamate kinase compare
SMc01605 -0.9 -4.1 periplasmic binding ABC transporter protein compare
SMc02520 -0.9 -4.1 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc04401 -0.9 -2.4 transcriptional regulator compare
SMc00450 -0.9 -0.7 protoheme IX farnesyltransferase compare
SMa1093 -0.8 -3.5 hypothetical protein compare
SM_b21173 -0.8 -0.9 hypothetical protein compare
SMa0190 -0.8 -3.0 transcriptional regulator compare
SMa0189 -0.8 -2.6 hypothetical protein compare
SMc01494 -0.8 -5.2 phosphoserine phosphatase compare
SMc02164 -0.8 -2.1 fructokinase compare
SMc04348 -0.8 -1.5 transcriptional regulator compare
SMc02425 -0.8 -1.7 transcriptional regulator compare
SMa0545 -0.8 -3.4 hypothetical protein compare
SM_b20698 -0.8 -2.1 transporter compare
SMc02435 -0.8 -1.1 methyltransferase compare
SMc00711 -0.8 -2.5 cyclohexadienyl dehydrogenase compare
SMc03924 -0.8 -4.5 glycogen synthase compare
SMc02862 -0.8 -3.8 Pit accessory protein compare
SMc02115 -0.8 -0.5 hypothetical protein compare
SMc02266 -0.8 -1.3 hypothetical protein compare
SMc00641 -0.8 -3.2 D-3-phosphoglycerate dehydrogenase compare
SMc00987 -0.8 -1.1 hypothetical protein compare
SM_b21174 -0.8 -2.3 phosphate uptake ABC transporter permease compare
SMc02173 -0.8 -1.2 hypothetical protein compare
SMc03124 -0.8 -1.8 periplasmic binding ABC transporter protein compare
SMc01607 -0.8 -4.2 permease compare
SMa0357 -0.8 -3.4 hypothetical protein compare
SMc04001 -0.8 -0.9 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc04242 -0.7 -1.4 zinc uptake regulation protein compare
SMc03786 -0.7 -2.9 bacterioferritin compare
SMc01801 -0.7 -1.7 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SM_b20752 -0.7 -3.7 3-hydroxyisobutyryl-CoA hydrolase compare
SMa1136 -0.7 -2.0 hypothetical protein compare
SMc00494 -0.7 -1.3 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03835 -0.7 -2.6 2'-5' RNA ligase compare
SMc02287 -0.7 -1.1 DNA-invertase compare
SMc04357 -0.7 -1.9 hypothetical protein compare
SMc04134 -0.7 -2.6 transcriptional regulator compare
SMc02714 -0.7 -0.9 hypothetical protein compare
SMa5007 -0.7 -1.5 transcriptional regulator compare
SMc02449 -0.7 -1.9 acetyltransferase compare
SMa1008 -0.7 -2.7 hypothetical protein compare
SMc02385 -0.7 -1.5 hypothetical protein compare
SM_b20031 -0.7 -2.4 hypothetical protein compare
SM_b20148 -0.7 -2.6 transcriptional regulator compare
SMc01461 -0.7 -3.3 DNA helicase II protein compare
SMa0846 -0.7 -1.0 transposase, fragment compare
SMc04454 -0.7 -2.9 ABC transporter ATP-binding protein compare
SMc02051 -0.7 -1.2 hypothetical protein compare
SMc00427 -0.7 -1.2 peptide chain release factor RF-3 protein compare
SMc00091 -0.7 -4.3 sulfate adenylyltransferase compare
SMc04428 -0.7 -2.3 hypothetical protein compare
SMc00451 -0.7 -3.3 processing protease compare
SMc01160 -0.7 -0.8 hypothetical protein compare
SMc01147 -0.7 -1.1 coproporphyrinogen III oxidase compare
SMc05009 -0.7 -1.1 nodulation protein NolR compare
SMc02228 -0.7 -3.3 acetyl-CoA acetyltransferase compare
SMc01417 -0.7 -2.2 hypothetical protein compare
SM_b20139 -0.7 -2.7 hypothetical protein compare
SMc04008 -0.7 -1.6 hypothetical protein compare
SM_b21679 -0.7 -0.8 hypothetical protein compare
SMa1095 -0.7 -0.5 hypothetical protein compare
SMa1697 -0.7 -1.1 hypothetical protein compare
SMc03157 -0.7 -3.1 outer membrane lipoprotein transmembrane compare
SMa0659 -0.7 -1.3 cytochrome c binding protein, carboxyl terminus compare
SMc02102 -0.7 -1.5 hypothetical protein compare
SMc02614 -0.7 -1.6 hypothetical protein compare
SMc02055 -0.7 -0.6 phytoene synthase compare
SMa1917 -0.7 -2.3 hypothetical protein compare
SMc01039 -0.7 -1.7 hypothetical protein compare
SMc00640 -0.7 -3.4 phosphoserine aminotransferase compare
SMa2169 -0.7 -3.1 hypothetical protein compare
SM_b20413 -0.7 -0.8 hypothetical protein compare
SMa0222 -0.7 -1.5 GntR family transcriptional regulator compare
SMc01364 -0.7 -0.9 DNA topoisomerase I compare
SMc02941 -0.6 -2.2 hypothetical protein compare
SMc04028 -0.6 -5.3 glutamate synthase compare
SM_b21021 -0.6 -2.4 transcriptional regulator compare
SMa1702 -0.6 -1.7 hypothetical protein compare
SMa0734 -0.6 -1.2 hypothetical protein compare
SMc02246 -0.6 -0.5 hypothetical protein compare
SMc00053 -0.6 -0.4 monovalent cation/H+ antiporter subunit C compare
SMc02693 -0.6 -1.0 peptidyl-tRNA hydrolase compare
SM_b20474 -0.6 -1.7 hypothetical protein compare
SMc01877 -0.6 -3.0 DNA repair protein compare
SMc02052 -0.6 -0.7 hypothetical protein compare
SM_b21272 -0.6 -2.6 LacI family transcriptional regulator compare
SM_b20687 -0.6 -2.4 hypothetical protein compare
SMc00131 -0.6 -3.6 transcriptional regulator compare
SMc00090 -0.6 -2.9 sulfate adenylyltransferase compare
SMa1158 -0.6 -2.1 hypothetical protein compare
SM_b21035 -0.6 -1.6 hypothetical protein compare
SM_b20003 -0.6 -2.2 pyrroline-5-carboxylate reductase compare
SMc00579 -0.6 -1.7 dimethyladenosine transferase compare
SMc01347 -0.6 -2.0 hypothetical protein compare
SMa1413 -0.6 -1.3 hypothetical protein compare
SM_b21157 -0.6 -2.0 translation initiation inhibitor protein compare
SMc04121 -0.6 -0.9 uracil phosphoribosyltransferase compare
SMc01120 -0.6 -1.6 hypothetical protein compare
SM_b21689 -0.6 -1.5 hypothetical protein compare
SM_b20897 -0.6 -1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a-hepes control experiments