Experiment set18IT054 for Sinorhizobium meliloti 1021

Compare to:

R2A-HEPES with volatiles from Trichoderma atroviridae IMI

200 most important genes:

  gene name fitness t score description  
SMc02766 -5.5 -17.0 tryptophan synthase subunit beta compare
SMc00235 -5.3 -9.3 anthranilate phosphoribosyltransferase compare
SMc02767 -4.9 -11.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02725 -4.8 -15.4 anthranilate synthase compare
SMa1635 -4.8 -2.8 hypothetical protein compare
SMc02765 -4.8 -12.0 tryptophan synthase subunit alpha compare
SMc00236 -4.4 -7.9 Indole-3-glycerol phosphate synthase compare
SMc03967 -3.0 -2.0 Holliday junction resolvase compare
SMc00917 -2.9 -4.0 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00815 -2.9 -1.9 inosine 5'-monophosphate dehydrogenase compare
SM_b20810 -2.8 -20.1 membrane-located cell surface saccharide acetylase compare
SMc01360 -2.8 -1.9 aspartate carbamoyltransferase catalytic subunit compare
SMc02570 -2.7 -8.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00918 -2.7 -10.5 ATP phosphoribosyltransferase regulatory subunit compare
SMc02572 -2.6 -7.7 imidazole glycerol phosphate synthase subunit HisH compare
SMc02569 -2.5 -4.7 imidazole glycerol phosphate synthase subunit HisF compare
SMc00017 -2.5 -1.5 homoserine kinase compare
SMc01004 -2.5 -12.5 phosphoribosyl-AMP cyclohydrolase compare
SMc04330 -2.3 -2.3 trimethylamine methyltransferase compare
SMc01880 -2.2 -1.5 pantoate--beta-alanine ligase compare
SMc02866 -2.2 -4.5 transcriptional regulator compare
SMc02137 -2.1 -5.6 ornithine carbamoyltransferase compare
SMc02307 -2.0 -8.3 histidinol dehydrogenase compare
SMc01222 -2.0 -9.7 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc03763 -2.0 -1.3 cytosine-specific methyltransferase compare
SMc02246 -1.9 -0.8 hypothetical protein compare
SMc00492 -1.9 -1.1 hypothetical protein compare
SMc01361 -1.8 -3.2 dihydroorotase compare
SMc02385 -1.8 -3.1 hypothetical protein compare
SMc02909 -1.7 -1.5 transglycosylase transmembrane protein compare
SMc01091 -1.7 -3.3 hypothetical protein compare
SMc03826 -1.6 -1.1 argininosuccinate synthase compare
SMc00412 -1.6 -4.2 orotidine 5'-phosphate decarboxylase compare
SMc00010 -1.6 -1.5 cytochrome C oxidase polypeptide I transmembrane protein compare
SMa2034 -1.5 -2.4 hypothetical protein compare
SMc03100 -1.5 -1.3 hypothetical protein compare
SMc04001 -1.5 -1.4 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc03839 -1.4 -2.3 hypothetical protein compare
SM_b21633 -1.4 -1.5 enoyl-CoA hydratase compare
SMc01223 -1.4 -2.8 transcriptional regulator compare
SMc03978 -1.4 -0.9 transketolase compare
SMc00580 -1.4 -2.4 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc03899 -1.4 -1.4 hypothetical protein compare
SMc01770 -1.4 -2.3 serine hydroxymethyltransferase compare
SMc00711 -1.4 -4.0 cyclohexadienyl dehydrogenase compare
SMc02245 -1.3 -4.3 dihydroorotate dehydrogenase 2 compare
SMc01207 -1.3 -1.7 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc01041 -1.2 -2.2 NIFR3-like protein compare
SMa1639 -1.2 -1.4 hypothetical protein compare
SMc01471 -1.2 -2.2 cytochrome C oxidase assembly factor transmembrane protein compare
SMc00640 -1.2 -6.1 phosphoserine aminotransferase compare
SM_b22005 -1.2 -1.8 hypothetical protein compare
SMc02755 -1.2 -3.7 S-adenosyl-L-homocysteine hydrolase compare
SMa1323 -1.2 -2.0 Transcription regulator compare
SMc02165 -1.2 -4.0 orotate phosphoribosyltransferase compare
SMc02495 -1.2 -1.4 translaldolase compare
SMc01801 -1.2 -2.1 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02166 -1.2 -6.2 dihydroorotase compare
SMc00067 -1.2 -4.5 outer-membranne lipoprotein compare
SM_b20909 -1.1 -1.9 hypothetical protein compare
SM_b20880 -1.1 -5.9 ATP-dependent RNA helicase compare
SM_b20752 -1.1 -4.4 3-hydroxyisobutyryl-CoA hydrolase compare
SMc00293 -1.1 -5.3 homoserine dehydrogenase compare
SMc01881 -1.1 -2.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02050 -1.1 -2.5 trigger factor compare
SM_b20994 -1.1 -3.2 hypothetical protein compare
SMc02897 -1.1 -1.8 cytochrome C transmembrane protein compare
SMc00166 -1.1 -2.0 oxidoreductase NAD protein compare
SMc00188 -1.1 -5.0 cytochrome B transmembrane protein compare
SMc02058 -1.1 -2.6 YAJC protein compare
SMc02121 -1.1 -1.7 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc02978 -1.0 -2.8 hypothetical protein compare
SMc00494 -1.0 -1.7 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00295 -1.0 -1.1 hypothetical protein compare
SMc01800 -1.0 -0.5 cytochrome C oxidase assembly transmembrane protein compare
SMc00427 -1.0 -1.4 peptide chain release factor RF-3 protein compare
SMc02164 -1.0 -1.4 fructokinase compare
SMc00641 -1.0 -3.8 D-3-phosphoglycerate dehydrogenase compare
SMc02640 -1.0 -2.9 UDP-glucuronic acid epimerase compare
SMc04346 -1.0 -4.3 ketol-acid reductoisomerase compare
SMc01337 -1.0 -1.4 hypothetical protein compare
SMc04383 -1.0 -3.2 putative hydrolase, required for lysine catabolism (from data) compare
SM_b21174 -1.0 -3.0 phosphate uptake ABC transporter permease compare
SM_b21176 -1.0 -2.8 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc04327 -0.9 -1.2 hypothetical protein compare
SMc00337 -0.9 -1.3 hypothetical protein compare
SMa5010 -0.9 -1.3 hypothetical protein compare
SMc01494 -0.9 -5.6 phosphoserine phosphatase compare
SMc01147 -0.9 -1.4 coproporphyrinogen III oxidase compare
SMc00450 -0.9 -0.6 protoheme IX farnesyltransferase compare
SM_b20948 -0.9 -0.9 glucosyltransferase compare
SMc01726 -0.9 -3.1 acetylglutamate kinase compare
SMc01440 -0.9 -3.7 hydrolase serine protease transmembrane protein compare
SMa0222 -0.9 -1.6 GntR family transcriptional regulator compare
SMc03979 -0.9 -1.7 glyceraldehyde-3-phosphate dehydrogenase compare
SMc04385 -0.9 -3.0 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc01315 -0.9 -1.2 hypothetical protein compare
SMc02451 -0.9 -0.9 hypothetical protein compare
SMc00856 -0.8 -0.9 hypothetical protein compare
SMa1361 -0.8 -2.5 hypothetical protein compare
SMc02234 -0.8 -1.3 hypothetical protein compare
SMc03006 -0.8 -1.0 chemotaxis regulator protein compare
SMc00355 -0.8 -1.4 hypothetical protein compare
SMc04088 -0.8 -4.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01431 -0.8 -5.5 acetolactate synthase 3 catalytic subunit compare
SMc04296 -0.8 -0.5 cell division protein FtsZ compare
SMa0450 -0.8 -1.2 hypothetical protein compare
SMc01368 -0.8 -2.3 transport transmembrane protein compare
SMc02138 -0.8 -3.5 acetylornithine transaminase compare
SMc02425 -0.8 -1.9 transcriptional regulator compare
SMa1697 -0.8 -1.2 hypothetical protein compare
SMc00361 -0.8 -2.4 hypothetical protein compare
SMa1124 -0.8 -1.6 hypothetical protein compare
SMc01505 -0.8 -1.1 hypothetical protein compare
SMc01144 -0.8 -1.3 ribonuclease PH compare
SMc02862 -0.8 -3.7 Pit accessory protein compare
SMc01364 -0.8 -1.1 DNA topoisomerase I compare
SMc01607 -0.8 -4.3 permease compare
SMa1002 -0.7 -1.7 hypothetical protein compare
SMa0520 -0.7 -3.1 RpiR family transcriptional regulator compare
SMa1894 -0.7 -2.0 methionine sulfoxide reductase B compare
SM_b20773 -0.7 -2.5 GntR family transcriptional regulator compare
SMc01438 -0.7 -2.4 protease precursor signal peptide protein compare
SMc04313 -0.7 -2.5 hypothetical protein compare
SMc00351 -0.7 -1.1 hypothetical protein compare
SMc00963 -0.7 -1.1 hypothetical protein compare
SMc01929 -0.7 -1.4 hypothetical protein compare
SMc00712 -0.7 -1.4 hypothetical protein compare
SM_b21580 -0.7 -1.1 hypothetical protein compare
SMc02435 -0.7 -0.7 methyltransferase compare
SMc02695 -0.7 -2.1 GTP-dependent nucleic acid-binding protein EngD compare
SMc02683 -0.7 -1.1 hypothetical protein compare
SMc02647 -0.7 -1.6 transcriptional regulator compare
SM_b20814 -0.7 -3.3 hypothetical protein compare
SMc00006 -0.7 -1.8 hypothetical protein compare
SMc04401 -0.7 -2.3 transcriptional regulator compare
SMc00404 -0.7 -0.7 hypothetical protein compare
SMc03241 -0.7 -3.0 hypothetical protein compare
SMc02739 -0.7 -2.3 glycine betaine transport ATP-binding ABC transporter protein compare
SMc02574 -0.7 -1.9 imidazoleglycerol-phosphate dehydratase compare
SMa2251 -0.7 -2.8 hypothetical protein compare
SMc04262 -0.7 -3.1 6-phosphogluconate dehydrogenase compare
SMc00108 -0.7 -2.5 acetyltransferase compare
SMc03069 -0.7 -0.9 6-phosphogluconolactonase compare
SMc02280 -0.7 -1.1 hypothetical protein compare
SMc01608 -0.7 -2.3 ABC transporter ATP-binding protein compare
SMa1063 -0.7 -1.3 hypothetical protein compare
SMc02172 -0.7 -2.8 transcriptional regulator compare
SMa0748 -0.7 -1.1 MucR family transcriptional regulator compare
SMc02582 -0.6 -1.8 hypothetical protein compare
SMc00821 -0.6 -1.2 hypothetical protein compare
SMc00579 -0.6 -2.4 dimethyladenosine transferase compare
SMc02115 -0.6 -0.5 hypothetical protein compare
SMc01153 -0.6 -0.8 enoyl-CoA hydratase compare
SMc02979 -0.6 -1.9 hypothetical protein compare
SMc02247 -0.6 -0.8 signal peptide protein compare
SMa2081 -0.6 -2.1 ABC transporter ATP-binding protein compare
SM_b21035 -0.6 -2.0 hypothetical protein compare
SMc01606 -0.6 -3.4 permease compare
SM_b21551 -0.6 -0.8 hypothetical protein compare
SMa0189 -0.6 -2.0 hypothetical protein compare
SMc00876 -0.6 -2.0 ATP-binding MRP protein compare
SMc00859 -0.6 -1.2 hypothetical protein compare
SM_b20701 -0.6 -0.8 hypothetical protein compare
SMc04003 -0.6 -0.7 50S ribosomal protein L36 compare
SM_b20809 -0.6 -2.7 arabinose-5-phosphate isomerase compare
SMc03070 -0.6 -2.2 glucose-6-phosphate 1-dehydrogenase compare
SMc01836 -0.6 -2.6 hypothetical protein compare
SMc04453 -0.6 -0.9 hypothetical protein compare
SMc03993 -0.6 -2.0 hypothetical protein compare
SMc01160 -0.6 -1.1 hypothetical protein compare
SMc02107 -0.6 -0.8 hypothetical protein compare
SMc01441 -0.6 -2.7 membrane bound protease compare
SMc02658 -0.6 -1.2 hypothetical protein compare
SMc01495 -0.6 -1.2 transcriptional regulator compare
SM_b20226 -0.6 -1.3 hypothetical protein compare
SMc00513 -0.6 -2.1 amino acid-binding periplasmic protein compare
SMa0753 -0.6 -0.6 hypothetical protein compare
SMc00189 -0.6 -2.2 cytochrome C1 protein compare
SMc00554 -0.6 -2.7 amidophosphoribosyltransferase compare
SMc02786 -0.6 -3.5 translocase transmembrane protein compare
SMc04045 -0.6 -3.2 dihydroxy-acid dehydratase compare
SMc01404 -0.6 -1.9 aspartate racemase compare
SMa1658 -0.6 -1.2 hypothetical protein compare
SM_b21182 -0.6 -2.9 hypothetical protein compare
SMc02069 -0.6 -1.5 hypothetical protein compare
SM_b21177 -0.6 -2.3 phosphate uptake ABC transporter ATP-binding protein compare
SMc00416 -0.6 -2.5 hypothetical protein compare
SMc01028 -0.5 -4.1 phosphopyruvate hydratase compare
SMc00987 -0.5 -0.9 hypothetical protein compare
SMc04244 -0.5 -2.6 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc01472 -0.5 -0.7 50S ribosomal protein L11 methyltransferase compare
SM_b20021 -0.5 -0.6 transcriptional regulator compare
SMc02434 -0.5 -1.7 hypothetical protein compare
SMc02052 -0.5 -0.6 hypothetical protein compare
SMc04432 -0.5 -2.7 hypothetical protein compare
SMc01089 -0.5 -0.8 hypothetical protein compare
SMc02380 -0.5 -1.9 oxidoreductase transmembrane protein compare
SMc02617 -0.5 -1.0 hypothetical protein compare
SMc03091 -0.5 -2.1 arginase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in volatiles experiments