Experiment set18IT045 for Klebsiella michiganensis M5al

Compare to:

D-Glucose carbon source and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days

200 most important genes:

  gene name fitness t score description  
BWI76_RS17720 -3.5 -1.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS09660 -3.0 -2.8 DNA translocase FtsK compare
BWI76_RS26570 -3.0 -4.3 anion permease compare
BWI76_RS17975 -2.4 -6.2 tail-specific protease compare
BWI76_RS09645 -2.2 -2.3 thioredoxin-disulfide reductase compare
BWI76_RS06595 -2.1 -3.5 hypothetical protein compare
BWI76_RS00785 -2.1 -9.3 cystathionine gamma-synthase compare
BWI76_RS00990 -2.1 -7.3 ketol-acid reductoisomerase compare
BWI76_RS23360 -2.0 -6.2 diaminopimelate decarboxylase compare
BWI76_RS04530 -2.0 -2.6 peptidylprolyl isomerase SurA compare
BWI76_RS13435 -2.0 -3.1 hypothetical protein compare
BWI76_RS23480 -1.9 -10.7 EAL domain-containing protein compare
BWI76_RS21070 -1.9 -3.6 outer membrane protein assembly factor BamB compare
BWI76_RS25070 -1.9 -2.9 hypothetical protein compare
BWI76_RS00805 -1.9 -5.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00850 -1.9 -9.9 acetylglutamate kinase compare
BWI76_RS02935 -1.8 -10.4 anaerobic ribonucleoside triphosphate reductase compare
BWI76_RS18815 -1.8 -3.4 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS15825 -1.8 -1.7 hypothetical protein compare
BWI76_RS04675 -1.8 -7.5 3-isopropylmalate dehydrogenase compare
BWI76_RS00845 -1.8 -9.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS23365 -1.8 -3.9 LysR family transcriptional regulator compare
BWI76_RS18820 -1.8 -6.1 nitrogenase molybdenum-iron protein subunit beta conserved
BWI76_RS08645 -1.8 -2.7 molybdate ABC transporter substrate-binding protein compare
BWI76_RS00180 -1.8 -2.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS19685 -1.8 -6.5 lysine transporter compare
BWI76_RS00975 -1.7 -9.4 dihydroxy-acid dehydratase compare
BWI76_RS22755 -1.7 -7.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00965 -1.7 -1.7 acetolactate synthase 2 small subunit compare
BWI76_RS11130 -1.7 -9.1 PTS glucose transporter subunit IIBC compare
BWI76_RS04665 -1.7 -12.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS09970 -1.7 -3.2 porin OmpA compare
BWI76_RS06525 -1.7 -7.7 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS02930 -1.7 -6.8 anaerobic ribonucleoside-triphosphate reductase activating protein compare
BWI76_RS11850 -1.7 -8.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS22760 -1.7 -9.1 sulfite reductase subunit beta compare
BWI76_RS00980 -1.7 -10.2 PLP-dependent threonine dehydratase compare
BWI76_RS18860 -1.7 -9.6 homocitrate synthase conserved
BWI76_RS01615 -1.7 -8.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18950 -1.6 -4.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04240 -1.6 -3.8 thr operon leader peptide compare
BWI76_RS05015 -1.6 -5.0 transcriptional regulator compare
BWI76_RS22695 -1.6 -5.2 sulfate adenylyltransferase compare
BWI76_RS22690 -1.6 -3.4 adenylyl-sulfate kinase compare
BWI76_RS01070 -1.6 -5.8 thiol reductase thioredoxin compare
BWI76_RS20965 -1.6 -4.0 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS11845 -1.6 -4.5 tryptophan synthase subunit beta compare
BWI76_RS09610 -1.6 -6.3 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS01200 -1.6 -1.9 diaminopimelate epimerase compare
BWI76_RS02530 -1.6 -2.3 tRNA dimethylallyltransferase compare
BWI76_RS05840 -1.6 -6.0 glutamate 5-kinase compare
BWI76_RS05835 -1.6 -2.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS18890 -1.6 -8.2 nif-specific transcriptional activator NifA conserved
BWI76_RS18840 -1.6 -9.0 nitrogenase iron-molybdenum cofactor biosynthesis protein NifN conserved
BWI76_RS04465 -1.6 -5.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00345 -1.5 -3.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS17980 -1.5 -4.9 RNA chaperone ProQ compare
BWI76_RS22805 -1.5 -8.7 GTP diphosphokinase compare
BWI76_RS04245 -1.5 -8.7 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS18810 -1.5 -4.5 nitrogenase iron protein compare
BWI76_RS20435 -1.5 -1.2 chorismate synthase compare
BWI76_RS04670 -1.5 -7.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS17250 -1.5 -7.9 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
BWI76_RS23220 -1.5 -6.7 amino-acid N-acetyltransferase compare
BWI76_RS11855 -1.5 -7.8 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS18830 -1.5 -4.2 protein NifY compare
BWI76_RS11860 -1.5 -7.1 anthranilate synthase component I compare
BWI76_RS18895 -1.5 -7.4 nitrogenase cofactor biosynthesis protein NifB conserved
BWI76_RS18955 -1.5 -7.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS20650 -1.5 -2.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS18875 -1.5 -6.3 nitrogen fixation protein NifM compare
BWI76_RS24285 -1.4 -8.5 cystathionine beta-lyase compare
BWI76_RS07185 -1.4 -3.5 hypothetical protein compare
BWI76_RS04255 -1.4 -7.3 threonine synthase compare
BWI76_RS22700 -1.4 -5.4 sulfate adenylyltransferase subunit 2 compare
BWI76_RS01655 -1.4 -6.2 homoserine O-succinyltransferase compare
BWI76_RS26665 -1.4 -3.0 DNA-binding response regulator compare
BWI76_RS08385 -1.4 -3.2 citrate (Si)-synthase compare
BWI76_RS22765 -1.4 -7.4 sulfite reductase subunit alpha compare
BWI76_RS18900 -1.4 -6.2 protein NifQ compare
BWI76_RS21370 -1.4 -2.5 ATP-dependent RNA helicase SrmB compare
BWI76_RS18835 -1.4 -5.6 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE conserved
BWI76_RS19840 -1.4 -1.6 hypothetical protein compare
BWI76_RS25315 -1.4 -8.1 glutamate synthase large subunit compare
BWI76_RS08650 -1.4 -3.3 molybdate ABC transporter permease compare
BWI76_RS04470 -1.4 -7.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS07465 -1.4 -3.2 TetR family transcriptional regulator compare
BWI76_RS04685 -1.4 -6.5 putative leucine operon leader peptide compare
BWI76_RS18850 -1.4 -8.4 iron-sulfur cluster assembly scaffold protein NifU conserved
BWI76_RS21475 -1.4 -4.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS03010 -1.4 -7.4 ornithine carbamoyltransferase compare
BWI76_RS01210 -1.4 -2.3 tyrosine recombinase XerC compare
BWI76_RS25065 -1.4 -3.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00855 -1.4 -7.0 argininosuccinate lyase compare
BWI76_RS18805 -1.4 -6.3 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
BWI76_RS09615 -1.4 -2.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS18855 -1.3 -3.8 cysteine desulfurase NifS compare
BWI76_RS25115 -1.3 -6.0 argininosuccinate synthase compare
BWI76_RS18935 -1.3 -6.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS07070 -1.3 -3.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS06535 -1.3 -4.6 endopeptidase La compare
BWI76_RS18930 -1.3 -3.4 histidinol-phosphate transaminase compare
BWI76_RS00960 -1.3 -3.6 acetolactate synthase 2 catalytic subunit compare
BWI76_RS00355 -1.3 -2.0 DNA polymerase I compare
BWI76_RS06605 -1.3 -6.9 ammonium transporter conserved
BWI76_RS21465 -1.3 -4.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS20640 -1.3 -5.7 cysteine synthase A compare
BWI76_RS00835 -1.3 -6.9 phosphoenolpyruvate carboxylase compare
BWI76_RS23240 -1.3 -4.3 exonuclease V subunit gamma compare
BWI76_RS04680 -1.3 -7.5 2-isopropylmalate synthase compare
BWI76_RS23230 -1.3 -3.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS06530 -1.3 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS20895 -1.3 -5.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS25600 -1.3 -1.2 tRNA-Thr compare
BWI76_RS08180 -1.3 -6.7 asparagine synthase B compare
BWI76_RS20995 -1.3 -4.7 RNA degradosome polyphosphate kinase compare
BWI76_RS04250 -1.3 -4.5 homoserine kinase compare
BWI76_RS08655 -1.2 -4.7 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS09740 -1.2 -8.0 formate transporter FocA compare
BWI76_RS00720 -1.2 -2.2 DNA-binding response regulator compare
BWI76_RS10990 -1.2 -3.8 dihydroorotase compare
BWI76_RS23265 -1.2 -4.0 hypothetical protein compare
BWI76_RS23920 -1.2 -3.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS08535 -1.2 -2.2 translocation protein TolB compare
BWI76_RS25975 -1.2 -3.8 phosphoribulokinase compare
BWI76_RS04510 -1.2 -2.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS09030 -1.2 -6.2 transpeptidase compare
BWI76_RS08520 -1.2 -2.9 colicin transporter TolQ compare
BWI76_RS00385 -1.2 -5.8 nitrogen assimilation regulatory protein compare
BWI76_RS00745 -1.1 -4.4 1,4-dihydroxy-2-naphthoate polyprenyltransferase compare
BWI76_RS09960 -1.1 -2.9 Lon protease compare
BWI76_RS26405 -1.1 -1.9 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS18885 -1.1 -2.7 nitrogen fixation regulatory protein compare
BWI76_RS02410 -1.1 -2.1 EF-P beta-lysylation protein EpmB compare
BWI76_RS04645 -1.1 -5.4 3-dehydroquinase compare
BWI76_RS25320 -1.1 -4.6 glutamate synthase compare
BWI76_RS18925 -1.1 -4.6 histidinol dehydrogenase compare
BWI76_RS24900 -1.1 -1.2 DeoR family transcriptional regulator compare
BWI76_RS11965 -1.1 -4.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS21580 -1.1 -1.1 SsrA-binding protein compare
BWI76_RS18870 -1.1 -1.6 protein NifZ compare
BWI76_RS13595 -1.1 -5.4 transcriptional regulator compare
BWI76_RS24025 -1.1 -4.4 agmatinase compare
BWI76_RS20350 -1.1 -4.9 amidophosphoribosyltransferase compare
BWI76_RS26055 -1.1 -6.4 siroheme synthase compare
BWI76_RS00400 -1.1 -1.7 glutamine synthetase compare
BWI76_RS06770 -1.1 -7.5 Hha toxicity attenuator compare
BWI76_RS18920 -1.1 -2.9 ATP phosphoribosyltransferase compare
BWI76_RS02575 -1.0 -6.4 exoribonuclease R compare
BWI76_RS21100 -1.0 -3.0 nucleoside-diphosphate kinase compare
BWI76_RS01325 -1.0 -2.1 twin-arginine translocase subunit TatB compare
BWI76_RS21265 -1.0 -7.3 phosphoribosylformylglycinamidine synthase compare
BWI76_RS20705 -1.0 -5.9 thiosulfate transporter subunit compare
BWI76_RS04160 -1.0 -4.6 phosphoserine phosphatase compare
BWI76_RS18715 -1.0 -5.6 hypothetical protein compare
BWI76_RS02450 -1.0 -5.4 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
BWI76_RS09760 -1.0 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS06765 -1.0 -2.1 transcriptional regulator compare
BWI76_RS26000 -1.0 -4.4 aspartate aminotransferase family protein compare
BWI76_RS00390 -1.0 -4.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS01080 -1.0 -7.3 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09735 -1.0 -4.1 formate acetyltransferase compare
BWI76_RS21310 -1.0 -1.4 DNA repair protein RecO compare
BWI76_RS01115 -1.0 -2.2 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS01330 -1.0 -2.4 twin-arginine translocase subunit TatC compare
BWI76_RS24600 -1.0 -2.7 dihydroxyacetone kinase compare
BWI76_RS26775 -1.0 -4.2 endo-1,4-D-glucanase compare
BWI76_RS25060 -1.0 -3.0 lipoprotein NlpI compare
BWI76_RS01610 -1.0 -7.0 phosphoribosylamine--glycine ligase compare
BWI76_RS20700 -1.0 -5.1 sulfate/thiosulfate transporter subunit compare
BWI76_RS15835 -1.0 -1.4 hypothetical protein compare
BWI76_RS07645 -1.0 -2.1 short-chain dehydrogenase/reductase compare
BWI76_RS01125 -1.0 -3.4 4-alpha-L-fucosyltransferase compare
BWI76_RS23270 -0.9 -6.7 phosphoenolpyruvate--protein phosphotransferase PtsP compare
BWI76_RS26620 -0.9 -1.5 Fe-S biogenesis protein NfuA compare
BWI76_RS04305 -0.9 -1.0 molecular chaperone DnaJ compare
BWI76_RS01110 -0.9 -3.6 TDP-fucosamine acetyltransferase compare
BWI76_RS21690 -0.9 -2.3 hypothetical protein compare
BWI76_RS00430 -0.9 -3.3 GNAT family N-acetyltransferase compare
BWI76_RS25280 -0.9 -1.9 RNase adaptor protein RapZ compare
BWI76_RS25335 -0.9 -2.3 stringent starvation protein A compare
BWI76_RS05200 -0.9 -2.6 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS15760 -0.9 -1.6 hypothetical protein compare
BWI76_RS20355 -0.9 -3.0 colicin V production protein compare
BWI76_RS02995 -0.9 -5.0 aspartate carbamoyltransferase compare
BWI76_RS10745 -0.9 -1.3 hypothetical protein compare
BWI76_RS10565 -0.9 -2.7 sugar isomerase compare
BWI76_RS27440 -0.9 -2.5 DNA helicase RecG compare
BWI76_RS10930 -0.9 -6.6 glucan biosynthesis protein G compare
BWI76_RS00940 -0.9 -3.8 transcriptional regulator HdfR compare
BWI76_RS18940 -0.9 -4.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS26175 -0.9 -2.0 DeoR/GlpR family transcriptional regulator compare
BWI76_RS03595 -0.9 -1.3 ethanolamine utilization protein EutM compare
BWI76_RS08525 -0.9 -3.6 colicin transporter compare
BWI76_RS08825 -0.9 -2.3 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS05260 -0.9 -1.5 chaperone compare
BWI76_RS27310 -0.8 -5.7 glycosyltransferase compare
BWI76_RS05005 -0.8 -2.5 polynucleotide adenylyltransferase compare
BWI76_RS20690 -0.8 -3.9 sulfate ABC transporter ATP-binding protein compare
BWI76_RS17345 -0.8 -2.8 nitrate/nitrite two-component system sensor histidine kinase NarX compare


Specific Phenotypes

For 15 genes in this experiment

For nitrogen fixation D-Glucose in Klebsiella michiganensis M5al

For nitrogen fixation D-Glucose across organisms