Experiment set18IT044 for Klebsiella michiganensis M5al

Compare to:

D-Glucose carbon source with ammonium chloride; anaerobic; 8 days

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS20360 +1.3 2.5 cell division protein DedD compare
BWI76_RS18605 +1.2 2.0 oxidoreductase molybdopterin-binding protein compare
BWI76_RS24925 +1.0 2.0 DnaA initiator-associating protein DiaA compare
BWI76_RS21580 +1.0 1.7 SsrA-binding protein compare
BWI76_RS07475 +1.0 1.5 DNA-binding transcriptional regulator RamA compare
BWI76_RS15660 +1.0 1.1 hypothetical protein compare
BWI76_RS21130 +1.0 2.5 Fe-S assembly protein IscX compare
BWI76_RS13250 +1.0 1.5 cytochrome b561 compare
BWI76_RS09520 +0.9 2.1 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS15620 +0.9 2.4 hypothetical protein compare
BWI76_RS25485 +0.9 1.9 septum formation protein Maf compare
BWI76_RS17400 +0.9 1.8 transporter compare
BWI76_RS09025 +0.9 2.1 GntR family transcriptional regulator compare
BWI76_RS18360 +0.9 2.2 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS14835 +0.9 1.6 hypothetical protein compare
BWI76_RS15530 +0.9 3.1 hypothetical protein compare
BWI76_RS19935 +0.8 1.9 hypothetical protein compare
BWI76_RS20145 +0.8 2.4 NADH-quinone oxidoreductase subunit K compare
BWI76_RS03105 +0.8 1.4 myo-inosose-2 dehydratase compare
BWI76_RS08380 +0.8 1.9 endonuclease VIII compare
BWI76_RS02725 +0.8 1.4 HxlR family transcriptional regulator compare
BWI76_RS07970 +0.8 1.8 hypothetical protein compare
BWI76_RS16040 +0.7 3.0 biotin-independent malonate decarboxylase subunit gamma compare
BWI76_RS20160 +0.7 2.5 NADH-quinone oxidoreductase subunit H compare
BWI76_RS01630 +0.7 1.4 16S ribosomal RNA compare
BWI76_RS11775 +0.7 1.7 2-deoxy-D-gluconate 3-dehydrogenase compare
BWI76_RS16360 +0.7 1.2 electron transport complex subunit RsxB compare
BWI76_RS17155 +0.7 1.7 hypothetical protein compare
BWI76_RS12925 +0.7 2.4 efflux transporter periplasmic adaptor subunit compare
BWI76_RS21500 +0.7 2.6 membrane protein compare
BWI76_RS12420 +0.7 1.1 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS21505 +0.7 1.2 hypothetical protein compare
BWI76_RS11455 +0.7 1.7 AraC family transcriptional regulator compare
BWI76_RS13895 +0.7 2.7 LysR family transcriptional regulator compare
BWI76_RS17420 +0.7 2.0 hypothetical protein compare
BWI76_RS11805 +0.7 2.3 hypothetical protein compare
BWI76_RS24625 +0.7 3.5 hypothetical protein compare
BWI76_RS16920 +0.6 1.1 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS13275 +0.6 1.7 hypothetical protein compare
BWI76_RS12270 +0.6 2.2 hypothetical protein compare
BWI76_RS24215 +0.6 2.7 LysR family transcriptional regulator compare
BWI76_RS23030 +0.6 1.5 cobalamin biosynthesis protein CbiM compare
BWI76_RS23245 +0.6 1.0 hypothetical protein compare
BWI76_RS22050 +0.6 3.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI compare
BWI76_RS18140 +0.6 1.5 zinc ABC transporter permease compare
BWI76_RS17300 +0.6 1.4 tRNA-Tyr compare
BWI76_RS08230 +0.6 2.9 hypothetical protein compare
BWI76_RS05880 +0.6 1.1 AraC-type DNA-binding domain-containing protein compare
BWI76_RS04560 +0.6 2.3 holo-ACP synthase CitX compare
BWI76_RS16485 +0.6 1.2 ribonuclease T compare
BWI76_RS22205 +0.6 1.8 cation ABC transporter ATP-binding protein compare
BWI76_RS09725 +0.6 2.4 MurR/RpiR family transcriptional regulator compare
BWI76_RS15350 +0.6 1.0 hypothetical protein compare
BWI76_RS18335 +0.6 3.3 DNA-binding response regulator compare
BWI76_RS13545 +0.6 1.2 N-acetyltransferase compare
BWI76_RS14065 +0.6 1.5 hypothetical protein compare
BWI76_RS22815 +0.6 4.7 hybrid sensor histidine kinase/response regulator compare
BWI76_RS07740 +0.6 1.2 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS17985 +0.6 2.6 hypothetical protein compare
BWI76_RS20970 +0.6 1.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS11900 +0.6 0.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS15190 +0.6 2.4 GGDEF domain-containing protein compare
BWI76_RS06635 +0.6 2.1 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS14225 +0.6 2.0 anti-ECF sigma factor ChrR compare
BWI76_RS17075 +0.6 2.1 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS12205 +0.6 2.6 hypothetical protein compare
BWI76_RS21285 +0.6 1.4 HAD family hydrolase compare
BWI76_RS01650 +0.6 1.3 acetyltransferase compare
BWI76_RS08405 +0.6 1.8 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS09505 +0.6 1.7 arginine transporter permease subunit ArtM compare
BWI76_RS02580 +0.5 1.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS14775 +0.5 1.4 creatinine amidohydrolase compare
BWI76_RS20170 +0.5 2.5 NADH-quinone oxidoreductase subunit F compare
BWI76_RS03020 +0.5 2.4 tRNA hydroxylase compare
BWI76_RS22850 +0.5 1.4 tRNA pseudouridine synthase TruC compare
BWI76_RS21560 +0.5 2.4 DNA repair protein RecN compare
BWI76_RS06745 +0.5 2.0 N-acetyltransferase GCN5 compare
BWI76_RS21235 +0.5 1.2 hypothetical protein compare
BWI76_RS20140 +0.5 3.7 NADH-quinone oxidoreductase subunit L compare
BWI76_RS24825 +0.5 2.0 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS01380 +0.5 1.5 YigZ family protein compare
BWI76_RS10380 +0.5 1.7 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS17470 +0.5 1.5 MerR family transcriptional regulator compare
BWI76_RS21660 +0.5 1.4 antirestriction protein compare
BWI76_RS19470 +0.5 1.7 DNA-binding response regulator compare
BWI76_RS08360 +0.5 2.1 LamB/YcsF family protein compare
BWI76_RS06320 +0.5 1.6 Xaa-Pro aminopeptidase compare
BWI76_RS04770 +0.5 1.5 D-alanine--D-alanine ligase compare
BWI76_RS12790 +0.5 1.1 lactate dehydrogenase compare
BWI76_RS14755 +0.5 1.0 SIS domain-containing protein compare
BWI76_RS10730 +0.5 1.2 bifunctional glucose-1-phosphatase/inositol phosphatase compare
BWI76_RS01535 +0.5 2.2 thiazole synthase compare
BWI76_RS15715 +0.5 1.5 putative ninG protein compare
BWI76_RS04975 +0.5 2.5 PTS fructose subfamily transporter subunit IIA compare
BWI76_RS14740 +0.5 1.4 LysR family transcriptional regulator compare
BWI76_RS06420 +0.5 2.5 oxidoreductase compare
BWI76_RS24040 +0.5 1.8 hypothetical protein compare
BWI76_RS02690 +0.5 1.8 hypothetical protein compare
BWI76_RS22420 +0.5 1.7 LacI family transcriptional regulator compare
BWI76_RS13220 +0.5 1.2 N-acetyltransferase compare
BWI76_RS20520 +0.5 3.0 indolepyruvate decarboxylase compare
BWI76_RS20190 +0.5 3.3 NADH-quinone oxidoreductase subunit A compare
BWI76_RS27605 +0.5 2.1 hypothetical protein compare
BWI76_RS09820 +0.5 1.7 hypothetical protein compare
BWI76_RS04440 +0.5 1.2 citrate lyase ACP compare
BWI76_RS20165 +0.5 2.5 NADH-quinone oxidoreductase subunit G compare
BWI76_RS24295 +0.5 2.5 AraC family transcriptional regulator compare
BWI76_RS14145 +0.5 2.2 dihydrolipoyl dehydrogenase compare
BWI76_RS05235 +0.5 1.0 hypothetical protein compare
BWI76_RS10255 +0.5 2.0 dihydrodipicolinate synthase family protein compare
BWI76_RS16080 +0.5 1.6 LysR family transcriptional regulator compare
BWI76_RS18580 +0.5 1.1 hypothetical protein compare
BWI76_RS17180 +0.5 1.2 hypothetical protein compare
BWI76_RS13050 +0.5 1.1 transcriptional regulator compare
BWI76_RS27835 +0.5 2.4 acyltransferase compare
BWI76_RS16640 +0.5 1.0 threonine transporter compare
BWI76_RS12195 +0.5 1.8 hypothetical protein compare
BWI76_RS22125 +0.5 1.2 membrane protein compare
BWI76_RS14105 +0.5 1.7 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS09325 +0.5 1.5 putative bacteriophage tail completion protein compare
BWI76_RS24770 +0.5 1.7 hypothetical protein compare
BWI76_RS22470 +0.5 2.3 transporter permease compare
BWI76_RS16675 +0.5 1.2 ABC transporter compare
BWI76_RS26270 +0.5 2.6 N-acetyltransferase compare
BWI76_RS11125 +0.5 1.0 metal-dependent hydrolase compare
BWI76_RS14000 +0.5 2.1 glutamine amidotransferase compare
BWI76_RS11635 +0.5 1.0 ABC transporter compare
BWI76_RS04615 +0.5 2.7 thiamine transporter substrate binding subunit compare
BWI76_RS11200 +0.5 1.7 transpeptidase compare
BWI76_RS01675 +0.5 1.8 putative cytoplasmic protein compare
BWI76_RS11705 +0.5 2.8 hypothetical protein compare
BWI76_RS18670 +0.5 1.9 hypothetical protein compare
BWI76_RS20135 +0.5 3.0 NADH-quinone oxidoreductase subunit M compare
BWI76_RS24660 +0.5 1.4 autoinducer 2 ABC transporter ATP-binding protein LsrA compare
BWI76_RS20155 +0.5 1.1 NADH-quinone oxidoreductase subunit I compare
BWI76_RS26285 +0.5 2.1 glycerophosphodiester phosphodiesterase compare
BWI76_RS19805 +0.5 1.9 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS01350 +0.4 0.8 NAD(P)H-flavin reductase compare
BWI76_RS11000 +0.4 1.8 glutaredoxin 2 compare
BWI76_RS04710 +0.4 1.3 hypothetical protein compare
BWI76_RS13400 +0.4 1.2 GntR family transcriptional regulator compare
BWI76_RS18060 +0.4 1.2 hypothetical protein compare
BWI76_RS13485 +0.4 1.6 NADP-dependent oxidoreductase compare
BWI76_RS15260 +0.4 1.0 hypothetical protein compare
BWI76_RS12235 +0.4 1.1 hypothetical protein compare
BWI76_RS26945 +0.4 2.7 hypothetical protein compare
BWI76_RS14325 +0.4 1.6 maturase compare
BWI76_RS17795 +0.4 2.0 ribonuclease D compare
BWI76_RS10615 +0.4 2.3 chorismate mutase compare
BWI76_RS01885 +0.4 0.8 CsbD family protein compare
BWI76_RS08215 +0.4 1.2 glucosamine-6-phosphate deaminase compare
BWI76_RS20740 +0.4 1.3 coproporphyrinogen III oxidase compare
BWI76_RS00865 +0.4 1.7 DNA-binding transcriptional regulator OxyR compare
BWI76_RS11190 +0.4 1.0 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS24110 +0.4 1.4 YggU family protein compare
BWI76_RS22630 +0.4 1.7 LysR family transcriptional regulator compare
BWI76_RS17640 +0.4 2.6 luciferase-like protein compare
BWI76_RS27760 +0.4 1.4 lactam utilization protein LamB compare
BWI76_RS19835 +0.4 1.5 nucleoid-associated protein YejK compare
BWI76_RS08395 +0.4 1.5 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS12225 +0.4 1.7 hypothetical protein compare
BWI76_RS12180 +0.4 3.1 membrane protein compare
BWI76_RS20375 +0.4 0.6 membrane protein compare
BWI76_RS20130 +0.4 2.8 NADH-quinone oxidoreductase subunit N compare
BWI76_RS15095 +0.4 1.7 isochorismatase compare
BWI76_RS18135 +0.4 2.6 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS05135 +0.4 0.9 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS27950 +0.4 1.8 transcriptional regulator compare
BWI76_RS26625 +0.4 1.6 gluconate transporter periplasmic gluconate-binding protein compare
BWI76_RS09565 +0.4 1.7 hybrid-cluster NAD(P)-dependent oxidoreductase compare
BWI76_RS12550 +0.4 0.9 hypothetical protein compare
BWI76_RS06200 +0.4 1.4 hypothetical protein compare
BWI76_RS23250 +0.4 0.6 hypothetical protein compare
BWI76_RS02050 +0.4 1.1 CidA/LrgA family protein compare
BWI76_RS12275 +0.4 2.6 hypothetical protein compare
BWI76_RS05555 +0.4 1.3 Crl family RNA polymerase assembly factor compare
BWI76_RS09555 +0.4 1.5 pyruvate oxidase compare
BWI76_RS13970 +0.4 1.0 ABC transporter compare
BWI76_RS14820 +0.4 1.2 LysR family transcriptional regulator compare
BWI76_RS17765 +0.4 1.3 hypothetical protein compare
BWI76_RS15845 +0.4 0.6 hypothetical protein compare
BWI76_RS15735 +0.4 1.3 hypothetical protein compare
BWI76_RS23630 +0.4 2.2 acetoin(diacetyl) reductase compare
BWI76_RS09165 +0.4 1.5 phosphatase YbjI compare
BWI76_RS14230 +0.4 2.4 flavin monoamine oxidase family protein compare
BWI76_RS10035 +0.4 0.6 hypothetical protein compare
BWI76_RS17970 +0.4 1.4 zinc metalloprotease HtpX compare
BWI76_RS01225 +0.4 1.5 magnesium transporter CorA compare
BWI76_RS19360 +0.4 2.1 glucose dehydrogenase compare
BWI76_RS11825 +0.4 2.0 LysR family transcriptional regulator compare
BWI76_RS21650 +0.4 3.1 hypothetical protein compare
BWI76_RS10535 +0.4 1.2 Asp/Glu/hydantoin racemase compare
BWI76_RS20150 +0.4 0.7 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS05975 +0.4 1.8 ABC transporter ATP-binding protein compare
BWI76_RS14865 +0.4 1.8 ribose ABC transporter permease compare
BWI76_RS13715 +0.4 1.4 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit compare
BWI76_RS10300 +0.4 2.8 MFS transporter compare
BWI76_RS26515 +0.4 2.2 nickel import ATP-binding protein NikD compare
BWI76_RS27020 +0.4 2.1 Xylulose kinase (EC 2.7.1.17) (from data) compare
BWI76_RS09240 +0.4 1.7 phosphoadenosine phosphosulfate reductase compare


Specific Phenotypes

For 14 genes in this experiment

For nitrogen fixation control D-Glucose in Klebsiella michiganensis M5al

For nitrogen fixation control D-Glucose across organisms