Experiment set18IT043 for Klebsiella michiganensis M5al

Compare to:

D-Glucose carbon source and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days

200 most important genes:

  gene name fitness t score description  
BWI76_RS12090 -7.1 -2.7 HNH endonuclease compare
BWI76_RS25070 -6.3 -1.4 hypothetical protein compare
BWI76_RS26085 -5.9 -2.3 3-dehydroquinate synthase compare
BWI76_RS11335 -5.5 -1.2 tautomerase compare
BWI76_RS11235 -5.5 -1.2 hypothetical protein compare
BWI76_RS09645 -5.4 -1.2 thioredoxin-disulfide reductase compare
BWI76_RS08385 -5.2 -3.5 citrate (Si)-synthase compare
BWI76_RS08650 -5.1 -1.6 molybdate ABC transporter permease compare
BWI76_RS24900 -5.1 -2.2 DeoR family transcriptional regulator compare
BWI76_RS00400 -5.0 -1.9 glutamine synthetase compare
BWI76_RS06605 -4.8 -5.2 ammonium transporter conserved
BWI76_RS25285 -4.7 -1.1 HPr family phosphocarrier protein compare
BWI76_RS17720 -4.5 -1.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS04305 -4.5 -1.0 molecular chaperone DnaJ compare
BWI76_RS25600 -4.4 -1.0 tRNA-Thr compare
BWI76_RS23895 -4.3 -1.6 Xaa-Pro aminopeptidase compare
BWI76_RS23265 -4.2 -2.6 hypothetical protein compare
BWI76_RS18885 -4.2 -2.9 nitrogen fixation regulatory protein compare
BWI76_RS05200 -4.1 -4.0 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS02530 -3.9 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS25060 -3.9 -3.9 lipoprotein NlpI compare
BWI76_RS17975 -3.8 -3.9 tail-specific protease compare
BWI76_RS18820 -3.8 -3.2 nitrogenase molybdenum-iron protein subunit beta conserved
BWI76_RS17250 -3.8 -4.3 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
BWI76_RS20380 -3.7 -1.4 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS09615 -3.7 -2.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS07740 -3.6 -1.1 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS02410 -3.6 -2.0 EF-P beta-lysylation protein EpmB compare
BWI76_RS09730 -3.6 -1.1 pyruvate formate lyase 1-activating protein compare
BWI76_RS01325 -3.6 -2.5 twin-arginine translocase subunit TatB compare
BWI76_RS13820 -3.5 -2.5 hypothetical protein compare
BWI76_RS00430 -3.5 -4.5 GNAT family N-acetyltransferase compare
BWI76_RS23230 -3.4 -5.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS21370 -3.4 -2.1 ATP-dependent RNA helicase SrmB compare
BWI76_RS15825 -3.3 -1.0 hypothetical protein compare
BWI76_RS08525 -3.3 -4.1 colicin transporter compare
BWI76_RS24080 -3.2 -1.9 DUF179 domain-containing protein compare
BWI76_RS20435 -3.2 -1.0 chorismate synthase compare
BWI76_RS14835 -3.1 -1.0 hypothetical protein compare
BWI76_RS01070 -3.1 -8.3 thiol reductase thioredoxin compare
BWI76_RS08210 -3.0 -1.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS05835 -3.0 -2.8 gamma-glutamyl-phosphate reductase compare
BWI76_RS08655 -2.9 -3.6 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS00390 -2.9 -4.9 two-component system sensor histidine kinase NtrB compare
BWI76_RS10935 -2.9 -3.7 glucan biosynthesis glucosyltransferase H compare
BWI76_RS22805 -2.9 -6.1 GTP diphosphokinase compare
BWI76_RS20965 -2.8 -2.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS18955 -2.8 -4.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS09755 -2.7 -3.7 phosphoserine transaminase compare
BWI76_RS18875 -2.7 -4.1 nitrogen fixation protein NifM compare
BWI76_RS25335 -2.7 -2.0 stringent starvation protein A compare
BWI76_RS09970 -2.6 -2.1 porin OmpA compare
BWI76_RS01540 -2.6 -1.8 thiamine biosynthesis protein ThiS compare
BWI76_RS24285 -2.6 -4.2 cystathionine beta-lyase compare
BWI76_RS00835 -2.6 -6.7 phosphoenolpyruvate carboxylase compare
BWI76_RS18935 -2.6 -4.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS11610 -2.5 -2.9 glutamate dehydrogenase compare
BWI76_RS13755 -2.5 -1.9 hypothetical protein compare
BWI76_RS00720 -2.5 -2.6 DNA-binding response regulator compare
BWI76_RS04240 -2.5 -2.7 thr operon leader peptide compare
BWI76_RS21660 -2.5 -1.4 antirestriction protein compare
BWI76_RS14625 -2.4 -1.2 protein TolA compare
BWI76_RS04160 -2.4 -3.1 phosphoserine phosphatase compare
BWI76_RS01655 -2.4 -4.2 homoserine O-succinyltransferase compare
BWI76_RS21070 -2.4 -1.5 outer membrane protein assembly factor BamB compare
BWI76_RS08535 -2.4 -2.3 translocation protein TolB compare
BWI76_RS23220 -2.4 -3.7 amino-acid N-acetyltransferase compare
BWI76_RS05260 -2.4 -1.4 chaperone compare
BWI76_RS17980 -2.4 -3.5 RNA chaperone ProQ compare
BWI76_RS08520 -2.3 -1.4 colicin transporter TolQ compare
BWI76_RS02745 -2.3 -1.3 hypothetical protein compare
BWI76_RS18860 -2.3 -4.4 homocitrate synthase conserved
BWI76_RS23365 -2.3 -5.2 LysR family transcriptional regulator compare
BWI76_RS01800 -2.3 -3.3 glucose-6-phosphate isomerase compare
BWI76_RS09960 -2.3 -1.7 Lon protease compare
BWI76_RS00180 -2.3 -1.7 F0F1 ATP synthase subunit epsilon compare
BWI76_RS04675 -2.3 -3.2 3-isopropylmalate dehydrogenase compare
BWI76_RS18840 -2.3 -5.8 nitrogenase iron-molybdenum cofactor biosynthesis protein NifN conserved
BWI76_RS18900 -2.3 -3.7 protein NifQ compare
BWI76_RS00385 -2.3 -5.2 nitrogen assimilation regulatory protein compare
BWI76_RS11850 -2.3 -5.8 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS04250 -2.2 -4.3 homoserine kinase compare
BWI76_RS18870 -2.2 -1.2 protein NifZ compare
BWI76_RS00975 -2.2 -7.1 dihydroxy-acid dehydratase compare
BWI76_RS04670 -2.2 -4.3 3-isopropylmalate dehydratase large subunit compare
BWI76_RS18855 -2.2 -2.3 cysteine desulfurase NifS compare
BWI76_RS11435 -2.2 -1.5 hypothetical protein compare
BWI76_RS04665 -2.2 -9.3 3-isopropylmalate dehydratase small subunit compare
BWI76_RS22755 -2.2 -4.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS04255 -2.1 -4.6 threonine synthase compare
BWI76_RS18850 -2.1 -4.4 iron-sulfur cluster assembly scaffold protein NifU conserved
BWI76_RS27440 -2.1 -2.3 DNA helicase RecG compare
BWI76_RS00745 -2.1 -4.0 1,4-dihydroxy-2-naphthoate polyprenyltransferase compare
BWI76_RS25975 -2.1 -4.8 phosphoribulokinase compare
BWI76_RS25000 -2.1 -1.4 malonate decarboxylase acyl carrier protein compare
BWI76_RS22690 -2.1 -2.5 adenylyl-sulfate kinase compare
BWI76_RS23270 -2.1 -6.5 phosphoenolpyruvate--protein phosphotransferase PtsP compare
BWI76_RS18925 -2.1 -3.3 histidinol dehydrogenase compare
BWI76_RS09610 -2.1 -3.3 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS00345 -2.1 -2.4 protein disulfide oxidoreductase DsbA compare
BWI76_RS26665 -2.1 -2.0 DNA-binding response regulator compare
BWI76_RS17310 -2.0 -2.3 AsnC family transcriptional regulator compare
BWI76_RS04465 -2.0 -3.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS05015 -2.0 -1.8 transcriptional regulator compare
BWI76_RS23480 -2.0 -6.0 EAL domain-containing protein compare
BWI76_RS23240 -2.0 -2.5 exonuclease V subunit gamma compare
BWI76_RS20640 -2.0 -4.7 cysteine synthase A compare
BWI76_RS02930 -2.0 -4.9 anaerobic ribonucleoside-triphosphate reductase activating protein compare
BWI76_RS00855 -2.0 -3.9 argininosuccinate lyase compare
BWI76_RS14375 -2.0 -3.5 hypothetical protein compare
BWI76_RS02935 -2.0 -5.7 anaerobic ribonucleoside triphosphate reductase compare
BWI76_RS01210 -2.0 -1.2 tyrosine recombinase XerC compare
BWI76_RS20650 -1.9 -2.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS20230 -1.9 -1.2 hypothetical protein compare
BWI76_RS00845 -1.9 -3.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS22765 -1.9 -4.5 sulfite reductase subunit alpha compare
BWI76_RS18895 -1.9 -3.7 nitrogenase cofactor biosynthesis protein NifB conserved
BWI76_RS26000 -1.9 -3.4 aspartate aminotransferase family protein compare
BWI76_RS26055 -1.9 -4.4 siroheme synthase compare
BWI76_RS19035 -1.9 -3.8 dTDP-rhamnosyl transferase compare
BWI76_RS03025 -1.9 -1.8 N-acetyltransferase compare
BWI76_RS18835 -1.9 -3.9 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE conserved
BWI76_RS14415 -1.9 -2.0 transcriptional regulator, TetR family protein compare
BWI76_RS06525 -1.9 -3.3 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS20565 -1.9 -2.2 hypothetical protein compare
BWI76_RS04645 -1.9 -4.5 3-dehydroquinase compare
BWI76_RS00940 -1.9 -4.4 transcriptional regulator HdfR compare
BWI76_RS06335 -1.9 -1.7 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS21465 -1.9 -2.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS15605 -1.9 -2.0 hypothetical protein compare
BWI76_RS20895 -1.8 -2.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS11300 -1.8 -1.0 cupin compare
BWI76_RS00980 -1.8 -5.3 PLP-dependent threonine dehydratase compare
BWI76_RS18890 -1.8 -5.7 nif-specific transcriptional activator NifA conserved
BWI76_RS00990 -1.8 -5.3 ketol-acid reductoisomerase compare
BWI76_RS05005 -1.8 -2.1 polynucleotide adenylyltransferase compare
BWI76_RS11860 -1.8 -4.4 anthranilate synthase component I compare
BWI76_RS00805 -1.8 -2.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS05840 -1.8 -3.1 glutamate 5-kinase compare
BWI76_RS09760 -1.8 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS12855 -1.8 -1.2 enamine deaminase RidA compare
BWI76_RS13955 -1.8 -1.5 hypothetical protein compare
BWI76_RS25315 -1.8 -5.0 glutamate synthase large subunit compare
BWI76_RS02995 -1.8 -5.4 aspartate carbamoyltransferase compare
BWI76_RS08750 -1.7 -1.1 kinase inhibitor compare
BWI76_RS02580 -1.7 -1.0 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS11965 -1.7 -2.1 orotidine-5'-phosphate decarboxylase compare
BWI76_RS14005 -1.7 -1.3 TetR family transcriptional regulator compare
BWI76_RS01125 -1.7 -2.8 4-alpha-L-fucosyltransferase compare
BWI76_RS23920 -1.7 -2.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS26045 -1.7 -1.6 nitrite reductase small subunit compare
BWI76_RS01615 -1.7 -5.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18070 -1.7 -1.9 DNA polymerase III subunit epsilon compare
BWI76_RS25320 -1.7 -3.3 glutamate synthase compare
BWI76_RS16000 -1.7 -1.1 multidrug transporter subunit MdtI compare
BWI76_RS04605 -1.7 -0.9 thiamine ABC transporter ATP-binding protein compare
BWI76_RS25910 -1.7 -1.7 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS18920 -1.7 -1.3 ATP phosphoribosyltransferase compare
BWI76_RS04245 -1.6 -7.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS24070 -1.6 -2.5 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS18805 -1.6 -3.9 pyruvate:ferredoxin (flavodoxin) oxidoreductase compare
BWI76_RS26120 -1.6 -2.1 hypothetical protein compare
BWI76_RS01095 -1.6 -1.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS08530 -1.6 -1.9 protein TolA compare
BWI76_RS18810 -1.6 -1.9 nitrogenase iron protein compare
BWI76_RS02180 -1.6 -0.8 hypothetical protein compare
BWI76_RS18300 -1.6 -3.0 hypothetical protein compare
BWI76_RS18930 -1.6 -2.1 histidinol-phosphate transaminase compare
BWI76_RS18675 -1.6 -1.4 fimbrial protein compare
BWI76_RS08180 -1.6 -4.7 asparagine synthase B compare
BWI76_RS20350 -1.6 -3.6 amidophosphoribosyltransferase compare
BWI76_RS20355 -1.6 -3.5 colicin V production protein compare
BWI76_RS02575 -1.6 -3.4 exoribonuclease R compare
BWI76_RS02775 -1.6 -2.6 outer membrane protein assembly factor compare
BWI76_RS04685 -1.5 -3.9 putative leucine operon leader peptide compare
BWI76_RS11855 -1.5 -4.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS25115 -1.5 -3.1 argininosuccinate synthase compare
BWI76_RS16315 -1.5 -1.2 SirA-like protein compare
BWI76_RS20690 -1.5 -2.5 sulfate ABC transporter ATP-binding protein compare
BWI76_RS06770 -1.5 -5.4 Hha toxicity attenuator compare
BWI76_RS19685 -1.5 -2.3 lysine transporter compare
BWI76_RS22760 -1.5 -3.5 sulfite reductase subunit beta compare
BWI76_RS25280 -1.5 -1.4 RNase adaptor protein RapZ compare
BWI76_RS22700 -1.4 -2.8 sulfate adenylyltransferase subunit 2 compare
BWI76_RS00850 -1.4 -3.5 acetylglutamate kinase compare
BWI76_RS08645 -1.4 -1.7 molybdate ABC transporter substrate-binding protein compare
BWI76_RS06325 -1.4 -2.4 hypothetical protein compare
BWI76_RS08765 -1.4 -2.3 8-amino-7-oxononanoate synthase compare
BWI76_RS18940 -1.4 -2.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04680 -1.4 -4.9 2-isopropylmalate synthase compare
BWI76_RS16895 -1.4 -1.1 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS06535 -1.4 -2.0 endopeptidase La compare
BWI76_RS17350 -1.4 -1.2 DNA-binding response regulator compare
BWI76_RS03415 -1.4 -2.1 LacI family transcriptional regulator compare
BWI76_RS09740 -1.4 -4.3 formate transporter FocA compare
BWI76_RS25545 -1.4 -1.3 hypothetical protein compare
BWI76_RS12145 -1.4 -1.1 hypothetical protein compare
BWI76_RS00355 -1.4 -1.2 DNA polymerase I compare
BWI76_RS14305 -1.3 -2.8 metallophosphoesterase compare
BWI76_RS01610 -1.3 -3.5 phosphoribosylamine--glycine ligase compare


Specific Phenotypes

For 7 genes in this experiment

For nitrogen fixation D-Glucose in Klebsiella michiganensis M5al

For nitrogen fixation D-Glucose across organisms