Experiment set18IT043 for Klebsiella michiganensis M5al

Compare to:

D-Glucose carbon source and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 3 days

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS21245 +2.6 8.0 nitrogen regulatory protein P-II compare
BWI76_RS08390 +2.6 10.2 hypothetical protein compare
BWI76_RS01350 +2.5 3.0 NAD(P)H-flavin reductase compare
BWI76_RS07725 +2.4 2.4 iron-enterobactin transporter permease compare
BWI76_RS08395 +2.3 5.8 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS01885 +2.2 2.7 CsbD family protein compare
BWI76_RS08405 +2.2 5.2 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS23885 +2.1 4.1 2-octaprenylphenol hydroxylase compare
BWI76_RS20145 +2.0 3.8 NADH-quinone oxidoreductase subunit K compare
BWI76_RS22205 +2.0 3.2 cation ABC transporter ATP-binding protein compare
BWI76_RS18360 +2.0 2.7 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS19935 +1.9 2.6 hypothetical protein compare
BWI76_RS21505 +1.8 2.0 hypothetical protein compare
BWI76_RS03595 +1.8 2.5 ethanolamine utilization protein EutM compare
BWI76_RS25485 +1.8 2.2 septum formation protein Maf compare
BWI76_RS26095 +1.7 2.5 shikimate kinase compare
BWI76_RS15850 +1.7 2.8 DUF1317 domain-containing protein compare
BWI76_RS00865 +1.7 5.4 DNA-binding transcriptional regulator OxyR compare
BWI76_RS21500 +1.7 4.8 membrane protein compare
BWI76_RS17675 +1.6 2.6 hypothetical protein compare
BWI76_RS11155 +1.6 2.3 penicillin-binding protein activator LpoB compare
BWI76_RS06495 +1.6 7.5 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS06475 +1.6 2.2 protoheme IX farnesyltransferase compare
BWI76_RS01185 +1.5 2.7 adenylate cyclase compare
BWI76_RS13050 +1.5 2.2 transcriptional regulator compare
BWI76_RS18455 +1.5 1.9 tRNA-Ser compare
BWI76_RS18065 +1.5 2.6 DNA polymerase III subunit theta compare
BWI76_RS14435 +1.5 2.1 glutamine ABC transporter ATP-binding protein compare
BWI76_RS20140 +1.5 7.6 NADH-quinone oxidoreductase subunit L compare
BWI76_RS24720 +1.4 3.0 hypothetical protein compare
BWI76_RS13400 +1.4 4.1 GntR family transcriptional regulator compare
BWI76_RS20165 +1.4 4.7 NADH-quinone oxidoreductase subunit G compare
BWI76_RS01385 +1.4 3.8 potassium transporter compare
BWI76_RS18605 +1.4 1.6 oxidoreductase molybdopterin-binding protein compare
BWI76_RS04200 +1.4 3.4 phosphoglycerate mutase GpmB compare
BWI76_RS06680 +1.4 1.4 hypothetical protein compare
BWI76_RS20190 +1.3 7.6 NADH-quinone oxidoreductase subunit A compare
BWI76_RS01940 +1.3 3.1 hypothetical protein compare
BWI76_RS15350 +1.3 1.3 hypothetical protein compare
BWI76_RS11455 +1.3 2.1 AraC family transcriptional regulator compare
BWI76_RS21130 +1.3 2.0 Fe-S assembly protein IscX compare
BWI76_RS08430 +1.3 3.2 succinate--CoA ligase subunit alpha compare
BWI76_RS06730 +1.3 2.0 lac repressor compare
BWI76_RS20160 +1.3 2.6 NADH-quinone oxidoreductase subunit H compare
BWI76_RS00240 +1.3 2.3 FMN-binding protein MioC compare
BWI76_RS08425 +1.3 4.4 succinyl-CoA ligase subunit beta compare
BWI76_RS08970 +1.2 2.5 glutamine ABC transporter permease GlnP compare
BWI76_RS13895 +1.2 1.9 LysR family transcriptional regulator compare
BWI76_RS23690 +1.2 0.9 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS06490 +1.2 3.5 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS22450 +1.2 1.7 selenoprotein W-related protein compare
BWI76_RS18060 +1.2 2.3 hypothetical protein compare
BWI76_RS10530 +1.2 1.5 GntR family transcriptional regulator with compare
BWI76_RS22235 +1.2 2.6 transcriptional regulator GutM compare
BWI76_RS27850 +1.2 3.8 DNA-binding transcriptional regulator DsdC compare
BWI76_RS09050 +1.2 1.2 MFS transporter compare
BWI76_RS19985 +1.2 1.9 MFS transporter compare
BWI76_RS09530 +1.2 1.0 hypothetical protein compare
BWI76_RS13505 +1.2 2.6 putative receptor compare
BWI76_RS02815 +1.2 1.7 fructose-bisphosphatase class I compare
BWI76_RS06755 +1.1 5.3 sigma factor YlaC compare
BWI76_RS23125 +1.1 1.7 propanediol dehydratase small subunit compare
BWI76_RS23860 +1.1 2.1 protein disulfide oxidoreductase compare
BWI76_RS25425 +1.1 1.1 arginine repressor compare
BWI76_RS12420 +1.1 1.0 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS01190 +1.1 2.9 iron donor protein CyaY compare
BWI76_RS20130 +1.1 4.2 NADH-quinone oxidoreductase subunit N compare
BWI76_RS01855 +1.1 2.3 chorismate lyase compare
BWI76_RS05525 +1.1 2.3 glycerophosphodiester phosphodiesterase compare
BWI76_RS11835 +1.1 2.1 putative regulatory protein MarR compare
BWI76_RS06485 +1.1 3.1 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS16260 +1.1 1.9 two-component sensor histidine kinase compare
BWI76_RS21200 +1.1 2.2 aldose epimerase compare
BWI76_RS05800 +1.1 1.9 phage transcriptional activator, Ogr/delta compare
BWI76_RS18365 +1.1 2.7 cystine ABC transporter substrate-binding protein compare
BWI76_RS16040 +1.1 2.5 biotin-independent malonate decarboxylase subunit gamma compare
BWI76_RS20170 +1.1 3.3 NADH-quinone oxidoreductase subunit F compare
BWI76_RS20180 +1.1 5.0 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS16500 +1.1 1.6 superoxide dismutase [Fe] compare
BWI76_RS11950 +1.1 4.8 phosphatidylglycerophosphatase B compare
BWI76_RS20155 +1.1 2.1 NADH-quinone oxidoreductase subunit I compare
BWI76_RS24180 +1.1 1.5 hypothetical protein compare
BWI76_RS13260 +1.1 3.8 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase compare
BWI76_RS14870 +1.1 2.3 hypothetical protein compare
BWI76_RS18140 +1.1 3.4 zinc ABC transporter permease compare
BWI76_RS07475 +1.1 0.8 DNA-binding transcriptional regulator RamA compare
BWI76_RS08215 +1.0 3.5 glucosamine-6-phosphate deaminase compare
BWI76_RS01870 +1.0 3.5 diacylglycerol kinase compare
BWI76_RS23305 +1.0 1.0 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS21340 +1.0 2.3 SoxR reducing system protein RseC compare
BWI76_RS08380 +1.0 1.3 endonuclease VIII compare
BWI76_RS13525 +1.0 1.9 putative luciferase-like monooxygenase compare
BWI76_RS00710 +1.0 1.6 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS15745 +1.0 2.8 hypothetical protein compare
BWI76_RS19420 +1.0 4.9 Fe-S-binding ATPase compare
BWI76_RS26590 +1.0 1.4 transcriptional regulator compare
BWI76_RS21275 +1.0 3.4 lytic transglycosylase F compare
BWI76_RS23635 +1.0 5.2 MFS transporter compare
BWI76_RS17375 +1.0 2.1 nitrate ABC transporter, permease protein compare
BWI76_RS13590 +1.0 1.6 hypothetical protein compare
BWI76_RS20135 +1.0 3.5 NADH-quinone oxidoreductase subunit M compare
BWI76_RS15715 +1.0 1.6 putative ninG protein compare
BWI76_RS02810 +1.0 1.6 sugar ABC transporter permease YjfF compare
BWI76_RS03615 +1.0 4.0 putative transcriptional regulatory protein compare
BWI76_RS06970 +1.0 2.9 selenophosphate-dependent tRNA 2-selenouridine synthase compare
BWI76_RS19145 +1.0 1.5 formate dehydrogenase cytochrome b556 subunit compare
BWI76_RS06885 +1.0 1.2 TonB family protein compare
BWI76_RS24240 +1.0 1.6 hypothetical protein compare
BWI76_RS19240 +1.0 1.4 ABC transporter substrate-binding protein compare
BWI76_RS20330 +1.0 1.9 histidine/lysine/arginine/ornithine ABC transporter permease HisQ compare
BWI76_RS20930 +1.0 1.3 arsenate reductase (glutaredoxin) compare
BWI76_RS08360 +1.0 1.6 LamB/YcsF family protein compare
BWI76_RS02785 +1.0 1.7 AIG2 family protein compare
BWI76_RS04210 +0.9 1.4 hypothetical protein compare
BWI76_RS12545 +0.9 1.0 hypothetical protein compare
BWI76_RS20150 +0.9 1.7 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS13215 +0.9 1.1 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS27760 +0.9 2.2 lactam utilization protein LamB compare
BWI76_RS18725 +0.9 2.3 hypothetical protein compare
BWI76_RS16160 +0.9 1.6 LysR family transcriptional regulator compare
BWI76_RS20035 +0.9 3.7 hypothetical protein compare
BWI76_RS18670 +0.9 2.9 hypothetical protein compare
BWI76_RS03175 +0.9 2.4 hypothetical protein compare
BWI76_RS09280 +0.9 2.4 terminase endonuclease subunit compare
BWI76_RS02870 +0.9 2.3 hypothetical protein compare
BWI76_RS20755 +0.9 2.0 microcompartment protein EutL compare
BWI76_RS07985 +0.9 0.9 fluoride ion transporter CrcB compare
BWI76_RS18135 +0.9 2.8 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS18410 +0.9 1.7 drug/metabolite exporter YedA compare
BWI76_RS18270 +0.9 1.7 hypothetical protein compare
BWI76_RS19735 +0.9 2.6 bifunctional PTS fructose transporter subunit IIA/HPr protein compare
BWI76_RS14045 +0.9 2.6 oxidoreductase compare
BWI76_RS12735 +0.9 1.4 phage repressor protein compare
BWI76_RS15015 +0.9 1.1 DUF2132 domain-containing protein compare
BWI76_RS07305 +0.9 2.6 sucrose operon repressor compare
BWI76_RS11135 +0.9 2.4 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE compare
BWI76_RS26285 +0.9 2.1 glycerophosphodiester phosphodiesterase compare
BWI76_RS26870 +0.9 3.1 dipeptide ABC transporter ATP-binding protein compare
BWI76_RS23510 +0.9 2.9 transcriptional regulator compare
BWI76_RS18770 +0.9 0.9 DNA gyrase inhibitor compare
BWI76_RS22875 +0.9 3.9 serine transporter compare
BWI76_RS24370 +0.9 2.4 hypothetical protein compare
BWI76_RS10755 +0.9 0.9 pyrimidine utilization flavin reductase protein F compare
BWI76_RS13275 +0.9 1.3 hypothetical protein compare
BWI76_RS13250 +0.9 0.7 cytochrome b561 compare
BWI76_RS21345 +0.9 1.2 sigma-E factor regulatory protein RseB compare
BWI76_RS05790 +0.9 1.3 phage DNA-binding protein compare
BWI76_RS05075 +0.9 0.9 type II secretion system protein GspG compare
BWI76_RS25480 +0.9 2.1 ribonuclease E/G compare
BWI76_RS13640 +0.9 1.8 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS07805 +0.9 1.9 sugar ABC transporter permease compare
BWI76_RS12940 +0.9 1.6 AraC family transcriptional regulator compare
BWI76_RS22215 +0.9 3.3 PTS sorbitol transporter subunit IIC compare
BWI76_RS20295 +0.9 1.9 dihydroneopterin triphosphate 2'-epimerase compare
BWI76_RS16505 +0.9 2.3 MFS transporter compare
BWI76_RS13485 +0.9 2.5 NADP-dependent oxidoreductase compare
BWI76_RS13140 +0.9 1.8 phenylacetate-CoA ligase compare
BWI76_RS02885 +0.9 3.6 dihydroorotase compare
BWI76_RS00440 +0.9 1.2 CopG family transcriptional regulator compare
BWI76_RS26635 +0.9 1.6 hypothetical protein compare
BWI76_RS23055 +0.9 2.3 cobalamin biosynthesis protein CbiG compare
BWI76_RS08515 +0.9 1.4 acyl-CoA thioesterase YbgC compare
BWI76_RS14815 +0.9 2.5 MdaB protein compare
BWI76_RS13220 +0.8 1.3 N-acetyltransferase compare
BWI76_RS12790 +0.8 1.0 lactate dehydrogenase compare
BWI76_RS23535 +0.8 1.0 hypothetical protein compare
BWI76_RS12115 +0.8 3.4 hypothetical protein compare
BWI76_RS19670 +0.8 1.8 S-formylglutathione hydrolase compare
BWI76_RS24945 +0.8 0.9 glutamine amidotransferase compare
BWI76_RS09975 +0.8 2.8 cell division inhibitor SulA compare
BWI76_RS05050 +0.8 1.7 general secretion pathway protein GspL compare
BWI76_RS13840 +0.8 1.7 MBL fold metallo-hydrolase compare
BWI76_RS05975 +0.8 1.7 ABC transporter ATP-binding protein compare
BWI76_RS16925 +0.8 2.4 3-(3-hydroxyphenyl)propionate hydroxylase compare
BWI76_RS00025 +0.8 0.8 hypothetical protein compare
BWI76_RS17610 +0.8 4.2 LysR family transcriptional regulator compare
BWI76_RS05785 +0.8 2.4 CI repressor compare
BWI76_RS14775 +0.8 1.6 creatinine amidohydrolase compare
BWI76_RS06630 +0.8 1.8 hypothetical protein compare
BWI76_RS24915 +0.8 4.1 penicillin-binding protein activator compare
BWI76_RS13945 +0.8 2.9 lysine exporter protein LysE/YggA compare
BWI76_RS06935 +0.8 1.6 co-chaperone YbbN compare
BWI76_RS11250 +0.8 1.3 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS01895 +0.8 1.6 cupin compare
BWI76_RS00640 +0.8 1.7 L-rhamnose mutarotase compare
BWI76_RS10435 +0.8 2.1 suppressor for copper-sensitivity C compare
BWI76_RS13950 +0.8 2.0 hypothetical protein compare
BWI76_RS27770 +0.8 2.1 hypothetical protein compare
BWI76_RS00075 +0.8 1.3 N-acetylmannosamine-6-phosphate 2-epimerase compare
BWI76_RS06980 +0.8 2.0 ureidoglycolate lyase compare
BWI76_RS13470 +0.8 1.6 transporter compare
BWI76_RS09400 +0.8 2.4 phage transcriptional activator, Ogr/delta compare
BWI76_RS16510 +0.8 2.3 transcriptional repressor PurR compare
BWI76_RS16130 +0.8 2.9 3-carboxy-cis,cis-muconate cycloisomerase compare
BWI76_RS15565 +0.8 1.8 hypothetical protein compare
BWI76_RS15775 +0.8 1.5 replication protein compare
BWI76_RS26300 +0.8 3.2 glycerol-3-phosphate transporter permease compare
BWI76_RS06735 +0.8 1.1 50S ribosomal protein L31 compare
BWI76_RS08735 +0.8 2.1 Urocanate hydratase (EC 4.2.1.49) (from data) compare
BWI76_RS17390 +0.8 0.9 DsrE family protein compare


Specific Phenotypes

For 7 genes in this experiment

For nitrogen fixation D-Glucose in Klebsiella michiganensis M5al

For nitrogen fixation D-Glucose across organisms