Experiment set18IT042 for Sinorhizobium meliloti 1021

Compare to:

R2A-HEPES control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMa1635 -6.1 -2.6 hypothetical protein compare
SMc00235 -5.1 -10.9 anthranilate phosphoribosyltransferase compare
SMc02767 -5.0 -9.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02766 -4.9 -20.4 tryptophan synthase subunit beta compare
SMc02725 -4.8 -15.8 anthranilate synthase compare
SMc02765 -4.6 -13.9 tryptophan synthase subunit alpha compare
SMc00236 -4.5 -6.3 Indole-3-glycerol phosphate synthase compare
SM_b20810 -3.6 -24.3 membrane-located cell surface saccharide acetylase compare
SMc00017 -3.6 -2.0 homoserine kinase compare
SMc00010 -3.0 -2.0 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03967 -2.9 -2.0 Holliday junction resolvase compare
SMc03127 -2.9 -2.0 ABC transporter permease compare
SMc03100 -2.6 -2.0 hypothetical protein compare
SMc01222 -2.5 -10.2 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00918 -2.4 -10.7 ATP phosphoribosyltransferase regulatory subunit compare
SMc01360 -2.2 -2.5 aspartate carbamoyltransferase catalytic subunit compare
SMc02570 -2.1 -6.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc02909 -2.1 -2.2 transglycosylase transmembrane protein compare
SMc00917 -2.1 -6.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00815 -2.1 -1.5 inosine 5'-monophosphate dehydrogenase compare
SMc01004 -2.1 -11.9 phosphoribosyl-AMP cyclohydrolase compare
SMc02115 -2.1 -1.2 hypothetical protein compare
SMc02246 -2.0 -0.8 hypothetical protein compare
SMc03763 -2.0 -1.3 cytosine-specific methyltransferase compare
SMc01880 -1.9 -1.8 pantoate--beta-alanine ligase compare
SMc02569 -1.9 -4.8 imidazole glycerol phosphate synthase subunit HisF compare
SMc02572 -1.9 -5.4 imidazole glycerol phosphate synthase subunit HisH compare
SMc00295 -1.8 -1.5 hypothetical protein compare
SMc01207 -1.8 -1.9 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc04296 -1.7 -0.9 cell division protein FtsZ compare
SMc00361 -1.7 -3.1 hypothetical protein compare
SMc02165 -1.7 -6.2 orotate phosphoribosyltransferase compare
SMc00067 -1.7 -5.7 outer-membranne lipoprotein compare
SMc00427 -1.6 -1.9 peptide chain release factor RF-3 protein compare
SMc00726 -1.6 -0.9 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01153 -1.6 -1.7 enoyl-CoA hydratase compare
SM_b20948 -1.5 -1.9 glucosyltransferase compare
SMc02362 -1.5 -1.3 cytochrome c-type biogenesis protein CcmE compare
SMc02451 -1.5 -1.3 hypothetical protein compare
SM_b21176 -1.4 -3.4 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00143 -1.4 -1.5 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
SMc04432 -1.4 -3.9 hypothetical protein compare
SMc02050 -1.4 -2.7 trigger factor compare
SMc02102 -1.4 -2.6 hypothetical protein compare
SMc00412 -1.3 -3.7 orotidine 5'-phosphate decarboxylase compare
SMc02245 -1.3 -4.6 dihydroorotate dehydrogenase 2 compare
SMc03839 -1.3 -2.1 hypothetical protein compare
SMc01929 -1.3 -2.1 hypothetical protein compare
SMc01147 -1.3 -1.5 coproporphyrinogen III oxidase compare
SMc01223 -1.3 -3.1 transcriptional regulator compare
SMc01440 -1.2 -3.5 hydrolase serine protease transmembrane protein compare
SMc02897 -1.2 -2.1 cytochrome C transmembrane protein compare
SMc02450 -1.2 -1.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
SMc02906 -1.2 -1.1 hypothetical protein compare
SMc00013 -1.2 -1.5 cytochrome C oxidase subunit III transmembrane protein compare
SMc04453 -1.2 -1.5 hypothetical protein compare
SMa1697 -1.2 -2.3 hypothetical protein compare
SMc00351 -1.1 -1.6 hypothetical protein compare
SMc01613 -1.1 -2.7 ribose-5-phosphate isomerase B compare
SMc01441 -1.1 -4.6 membrane bound protease compare
SMc00416 -1.1 -4.9 hypothetical protein compare
SMc00963 -1.1 -1.5 hypothetical protein compare
SM_b20809 -1.1 -3.6 arabinose-5-phosphate isomerase compare
SMc00293 -1.1 -5.8 homoserine dehydrogenase compare
SMc00711 -1.1 -2.3 cyclohexadienyl dehydrogenase compare
SMa0964 -1.1 -3.6 hypothetical protein compare
SMc02495 -1.1 -1.1 translaldolase compare
SMc01800 -1.1 -0.6 cytochrome C oxidase assembly transmembrane protein compare
SM_b20083 -1.1 -2.0 hypothetical protein compare
SMc02576 -1.0 -1.5 acetyltransferase compare
SMc01881 -1.0 -1.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMa0753 -1.0 -0.9 hypothetical protein compare
SMc03826 -1.0 -1.1 argininosuccinate synthase compare
SMc00580 -1.0 -1.9 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02799 -1.0 -2.0 16S rRNA methyltransferase GidB compare
SM_b20880 -1.0 -5.7 ATP-dependent RNA helicase compare
SMc04330 -1.0 -1.2 trimethylamine methyltransferase compare
SMc00691 -1.0 -1.9 site-specific tyrosine recombinase XerD compare
SMc03070 -1.0 -3.6 glucose-6-phosphate 1-dehydrogenase compare
SMc04182 -1.0 -2.2 hypothetical protein compare
SMc02058 -1.0 -2.2 YAJC protein compare
SMc02485 -1.0 -1.6 signal peptide protein compare
SM_b20814 -1.0 -5.8 hypothetical protein compare
SMc02121 -1.0 -1.3 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc02307 -1.0 -5.1 histidinol dehydrogenase compare
SMc00565 -1.0 -1.0 50S ribosomal protein L9 compare
SMc02166 -1.0 -3.9 dihydroorotase compare
SMc02543 -0.9 -3.4 hypothetical protein compare
SMc01041 -0.9 -1.5 NIFR3-like protein compare
SM_b20752 -0.9 -3.8 3-hydroxyisobutyryl-CoA hydrolase compare
SMc01361 -0.9 -2.1 dihydroorotase compare
SMc01438 -0.9 -2.9 protease precursor signal peptide protein compare
SMc03159 -0.9 -2.4 ABC transporter ATP-binding protein compare
SMc04346 -0.9 -2.8 ketol-acid reductoisomerase compare
SMc02287 -0.9 -1.6 DNA-invertase compare
SMa0878 -0.9 -2.2 glucosamine--fructose-6-phosphate aminotransferase compare
SMa5033 -0.9 -1.0 hypothetical protein compare
SMc02227 -0.9 -3.2 fatty oxidation complex enoyl-COA hydratase/3-hydroxyacyl-COA dehydrogenase/3-hydroxybutyryl-COA epimerase compare
SM_b20728 -0.9 -1.9 hypothetical protein compare
SMc02685 -0.9 -1.5 hypothetical protein compare
SMc02755 -0.9 -3.5 S-adenosyl-L-homocysteine hydrolase compare
SM_b21035 -0.8 -2.9 hypothetical protein compare
SMa0286 -0.8 -1.9 hypothetical protein compare
SMc00876 -0.8 -2.5 ATP-binding MRP protein compare
SMc01091 -0.8 -1.5 hypothetical protein compare
SMc01187 -0.8 -1.4 rare lipoprotein A compare
SMc03996 -0.8 -3.0 thiamine-phosphate pyrophosphorylase compare
SMc01208 -0.8 -1.4 peptidyl-prolyl cis-trans isomerase B protein compare
SMc00982 -0.8 -2.8 dioxygenase compare
SMc01494 -0.8 -4.7 phosphoserine phosphatase compare
SMc02520 -0.8 -4.4 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMa2215 -0.8 -2.6 GntR family transcriptional regulator compare
SM_b20294 -0.8 -1.0 transcriptional regulator NanR compare
SM_b20011 -0.8 -2.3 hypothetical protein compare
SM_b21679 -0.8 -1.1 hypothetical protein compare
SMc00976 -0.8 -1.4 enoyl-CoA hydratase compare
SM_b22005 -0.7 -1.2 hypothetical protein compare
SMc01765 -0.7 -1.5 hypothetical protein compare
SMc02867 -0.7 -1.5 multidrug-efflux system transmembrane protein compare
SMc00505 -0.7 -1.6 hypothetical protein compare
SMc01606 -0.7 -3.2 permease compare
SMc00641 -0.7 -3.5 D-3-phosphoglycerate dehydrogenase compare
SMc02979 -0.7 -2.4 hypothetical protein compare
SMc02140 -0.7 -0.5 phosphate regulon transcriptional regulatory protein compare
SMc04327 -0.7 -0.9 hypothetical protein compare
SMc02266 -0.7 -1.3 hypothetical protein compare
SMc00602 -0.7 -2.7 excinuclease ABC subunit C compare
SM_b21182 -0.7 -3.7 hypothetical protein compare
SM_b21174 -0.7 -1.9 phosphate uptake ABC transporter permease compare
SMc04036 -0.7 -2.5 ABC transporter ATP-binding protein compare
SMc00640 -0.7 -3.7 phosphoserine aminotransferase compare
SMc01836 -0.7 -1.8 hypothetical protein compare
SMa0771 -0.7 -1.4 hypothetical protein compare
SMc00073 -0.7 -1.1 hypothetical protein compare
SMc04045 -0.7 -3.9 dihydroxy-acid dehydratase compare
SMc00091 -0.7 -4.2 sulfate adenylyltransferase compare
SMc00656 -0.7 -0.9 hypothetical protein compare
SMc04024 -0.7 -2.7 membrane-bound lytic murein transglycosylase compare
SMc02862 -0.7 -3.3 Pit accessory protein compare
SMa0123 -0.7 -2.1 hypothetical protein compare
SMc00821 -0.7 -1.3 hypothetical protein compare
SMc00579 -0.7 -2.7 dimethyladenosine transferase compare
SMc02658 -0.7 -1.8 hypothetical protein compare
SM_b20114 -0.7 -2.2 hypothetical protein compare
SM_b20105 -0.7 -1.2 transcriptional regulator compare
SMa5011 -0.7 -1.5 oxidoreductase compare
SMc01605 -0.7 -3.1 periplasmic binding ABC transporter protein compare
SMc03180 -0.7 -1.8 monovalent cation/H+ antiporter subunit C compare
SMc01472 -0.7 -0.7 50S ribosomal protein L11 methyltransferase compare
SMc01608 -0.6 -2.7 ABC transporter ATP-binding protein compare
SMc02786 -0.6 -4.1 translocase transmembrane protein compare
SMc03184 -0.6 -1.0 PH adaptation potassium efflux system G transmembrane protein compare
SMa1666 -0.6 -1.8 hypothetical protein compare
SMc00650 -0.6 -0.9 hypothetical protein compare
SMa1894 -0.6 -1.0 methionine sulfoxide reductase B compare
SMc03999 -0.6 -1.7 hypothetical protein compare
SMc02137 -0.6 -1.7 ornithine carbamoyltransferase compare
SMc00495 -0.6 -1.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMa1902 -0.6 -1.5 hypothetical protein compare
SMc03850 -0.6 -0.5 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00188 -0.6 -3.1 cytochrome B transmembrane protein compare
SMc04439 -0.6 -2.8 glycine betaine transport ATP-binding ABC transporter protein compare
SMc01607 -0.6 -3.3 permease compare
SMa0433 -0.6 -1.6 hypothetical protein compare
SMc03289 -0.6 -1.5 hypothetical protein compare
SMc02425 -0.6 -2.0 transcriptional regulator compare
SMc04213 -0.6 -1.0 diacylglycerol kinase compare
SMa1170 -0.6 -2.4 hypothetical protein compare
SMa0545 -0.6 -2.9 hypothetical protein compare
SMc02435 -0.6 -0.7 methyltransferase compare
SM_b21115 -0.6 -1.7 response regulator protein compare
SMa1943 -0.6 -1.4 transcriptional regulator compare
SMc03069 -0.6 -0.6 6-phosphogluconolactonase compare
SMc02659 -0.6 -2.1 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMa1639 -0.6 -1.1 hypothetical protein compare
SMa1100 -0.6 -1.8 hypothetical protein compare
SMc02505 -0.6 -0.6 hypothetical protein compare
SMc02138 -0.6 -2.6 acetylornithine transaminase compare
SM_b20758 -0.6 -1.4 ArsR family transcriptional regulator compare
SMc02858 -0.6 -0.3 chaperone protein DnaJ compare
SMc00331 -0.6 -2.9 hypothetical protein compare
SM_b21177 -0.6 -2.3 phosphate uptake ABC transporter ATP-binding protein compare
SMc00736 -0.6 -1.7 DNA-3-methyladenine DNA glycosylase compare
SMc02158 -0.6 -2.3 acyltransferase compare
SMa0189 -0.6 -2.2 hypothetical protein compare
SMa0857 -0.6 -1.3 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase compare
SM_b20375 -0.6 -1.2 transcriptional regulator compare
SMc02582 -0.6 -1.5 hypothetical protein compare
SMa1413 -0.6 -1.3 hypothetical protein compare
SM_b20149 -0.6 -2.0 hypothetical protein compare
SMa2251 -0.6 -1.4 hypothetical protein compare
SM_b21485 -0.6 -1.6 hypothetical protein compare
SMc03899 -0.5 -0.7 hypothetical protein compare
SMc01853 -0.5 -2.5 hypothetical protein compare
SMc02250 -0.5 -1.3 large-conductance mechanosensitive channel compare
SMc03153 -0.5 -1.2 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc02639 -0.5 -1.0 transcriptional regulator compare
SMa0312 -0.5 -1.8 hypothetical protein compare
SMc01215 -0.5 -0.3 carbamoyl phosphate synthase large subunit compare
SMc02609 -0.5 -1.8 transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a-hepes control experiments