Experiment set18IT041 for Sinorhizobium meliloti 1021

Compare to:

R2A-HEPES control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMa1635 -5.9 -2.5 hypothetical protein compare
SMc00235 -5.7 -8.7 anthranilate phosphoribosyltransferase compare
SMc02767 -5.2 -11.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02766 -4.8 -15.3 tryptophan synthase subunit beta compare
SMc02725 -4.8 -14.8 anthranilate synthase compare
SMc02765 -4.7 -13.1 tryptophan synthase subunit alpha compare
SMc00236 -4.3 -6.7 Indole-3-glycerol phosphate synthase compare
SMc02906 -4.1 -1.7 hypothetical protein compare
SM_b20810 -3.6 -22.3 membrane-located cell surface saccharide acetylase compare
SMc00010 -2.8 -1.9 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00815 -2.7 -1.8 inosine 5'-monophosphate dehydrogenase compare
SMc01207 -2.7 -2.5 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc03100 -2.5 -1.8 hypothetical protein compare
SMc02569 -2.4 -4.1 imidazole glycerol phosphate synthase subunit HisF compare
SM_b20307 -2.3 -1.3 dihydroxyacetone kinase compare
SMc01004 -2.3 -9.0 phosphoribosyl-AMP cyclohydrolase compare
SMc04327 -2.2 -1.8 hypothetical protein compare
SMc01361 -2.2 -3.2 dihydroorotase compare
SMc01222 -2.1 -7.4 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02435 -2.1 -1.4 methyltransferase compare
SMc00917 -2.0 -5.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00918 -2.0 -7.4 ATP phosphoribosyltransferase regulatory subunit compare
SMc00017 -2.0 -1.6 homoserine kinase compare
SMc03967 -1.9 -1.4 Holliday junction resolvase compare
SMc02858 -1.9 -0.8 chaperone protein DnaJ compare
SMc01223 -1.9 -3.8 transcriptional regulator compare
SMc01845 -1.8 -1.7 transglycosylase transmembrane protein compare
SMc03763 -1.8 -1.2 cytosine-specific methyltransferase compare
SMc02570 -1.8 -6.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMa0740 -1.8 -2.3 hypothetical protein compare
SMc01880 -1.8 -1.7 pantoate--beta-alanine ligase compare
SMc00976 -1.7 -2.2 enoyl-CoA hydratase compare
SMc00012 -1.7 -1.4 cytochrome C oxidase assembly protein compare
SMc02362 -1.7 -1.1 cytochrome c-type biogenesis protein CcmE compare
SMc02425 -1.7 -3.9 transcriptional regulator compare
SMc00492 -1.6 -0.9 hypothetical protein compare
SMc00427 -1.5 -1.7 peptide chain release factor RF-3 protein compare
SMc00619 -1.5 -1.4 hypothetical protein compare
SMa0326 -1.5 -2.5 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc02058 -1.5 -2.5 YAJC protein compare
SMc00067 -1.5 -5.5 outer-membranne lipoprotein compare
SMc00963 -1.4 -1.6 hypothetical protein compare
SMc01153 -1.4 -1.5 enoyl-CoA hydratase compare
SMc01579 -1.4 -1.2 hypothetical protein compare
SM_b21176 -1.3 -4.1 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc03850 -1.3 -0.7 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02166 -1.3 -4.5 dihydroorotase compare
SMc02510 -1.3 -0.7 ferric uptake regulation protein compare
SMc02683 -1.3 -1.7 hypothetical protein compare
SMc04454 -1.3 -4.2 ABC transporter ATP-binding protein compare
SMc04453 -1.3 -1.4 hypothetical protein compare
SMc02102 -1.3 -2.4 hypothetical protein compare
SMc01178 -1.3 -1.8 multidrug transmembrane resistance signal peptide protein compare
SMa1240 -1.3 -1.3 NapF ferredoxin component of periplasmic nitrate reductase compare
SMc02574 -1.3 -4.4 imidazoleglycerol-phosphate dehydratase compare
SMc01440 -1.3 -4.0 hydrolase serine protease transmembrane protein compare
SMc00856 -1.2 -1.1 hypothetical protein compare
SMc02245 -1.2 -3.0 dihydroorotate dehydrogenase 2 compare
SMc03826 -1.2 -1.1 argininosuccinate synthase compare
SMc02165 -1.2 -4.5 orotate phosphoribosyltransferase compare
SMc03066 -1.2 -1.6 hypothetical protein compare
SMc00166 -1.2 -1.7 oxidoreductase NAD protein compare
SMc02897 -1.2 -1.9 cytochrome C transmembrane protein compare
SMc00579 -1.2 -3.5 dimethyladenosine transferase compare
SMc00580 -1.1 -1.5 4-hydroxythreonine-4-phosphate dehydrogenase compare
SM_b20752 -1.1 -5.0 3-hydroxyisobutyryl-CoA hydrolase compare
SMc02572 -1.1 -3.9 imidazole glycerol phosphate synthase subunit HisH compare
SMc02247 -1.1 -1.1 signal peptide protein compare
SMc00361 -1.1 -1.9 hypothetical protein compare
SM_b20814 -1.1 -5.3 hypothetical protein compare
SM_b21175 -1.1 -2.8 phosphate uptake ABC transporter permease compare
SMc04432 -1.1 -3.3 hypothetical protein compare
SMc01441 -1.0 -4.0 membrane bound protease compare
SMc02505 -1.0 -1.3 hypothetical protein compare
SMc02909 -1.0 -1.3 transglycosylase transmembrane protein compare
SM_b20114 -1.0 -2.9 hypothetical protein compare
SMc00073 -1.0 -1.6 hypothetical protein compare
SMa0955 -1.0 -1.7 GntR family transcriptional regulator compare
SM_b21679 -1.0 -1.3 hypothetical protein compare
SMc03751 -1.0 -3.4 hypothetical protein compare
SM_b21511 -1.0 -1.2 plasmid stability protein compare
SMc00914 -1.0 -1.8 oxidoreductase compare
SMc00412 -1.0 -2.7 orotidine 5'-phosphate decarboxylase compare
SMc00461 -0.9 -1.2 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc01438 -0.9 -2.9 protease precursor signal peptide protein compare
SM_b20320 -0.9 -0.9 TRAP-type large permease component compare
SMc03746 -0.9 -1.5 hypothetical protein compare
SMc02978 -0.9 -3.0 hypothetical protein compare
SMc00293 -0.9 -4.7 homoserine dehydrogenase compare
SMc02520 -0.9 -4.6 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc01929 -0.9 -1.5 hypothetical protein compare
SMc02307 -0.9 -4.4 histidinol dehydrogenase compare
SMc02799 -0.9 -1.5 16S rRNA methyltransferase GidB compare
SMc03124 -0.9 -1.7 periplasmic binding ABC transporter protein compare
SMa0063 -0.9 -1.8 GntR family transcriptional regulator compare
SMc04246 -0.9 -1.2 transmembrane signal peptide protein compare
SMc04346 -0.9 -2.8 ketol-acid reductoisomerase compare
SMa1595 -0.9 -2.0 hypothetical protein compare
SMa1323 -0.9 -1.2 Transcription regulator compare
SMc00588 -0.9 -1.8 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SM_b20809 -0.9 -3.5 arabinose-5-phosphate isomerase compare
SMc01881 -0.8 -1.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01208 -0.8 -1.2 peptidyl-prolyl cis-trans isomerase B protein compare
SMc02850 -0.8 -1.3 DNA polymerase I compare
SM_b20955 -0.8 -2.4 endo-beta-1,3-1,4-glycanase compare
SMc04003 -0.8 -1.0 50S ribosomal protein L36 compare
SMa1400 -0.8 -1.7 acyl-CoA dehydrogenase compare
SMc03070 -0.8 -3.2 glucose-6-phosphate 1-dehydrogenase compare
SMc02647 -0.8 -1.6 transcriptional regulator compare
SMc00496 -0.8 -1.1 hypothetical protein compare
SMc01570 -0.8 -1.3 transcriptional regulator compare
SMc02137 -0.8 -2.4 ornithine carbamoyltransferase compare
SMa1447 -0.8 -2.4 Permease, MFS compare
SMc02050 -0.8 -2.3 trigger factor compare
SMc04428 -0.8 -1.6 hypothetical protein compare
SMc00194 -0.8 -2.3 hypothetical protein compare
SMc00941 -0.8 -1.3 hypothetical protein compare
SMa0878 -0.8 -2.4 glucosamine--fructose-6-phosphate aminotransferase compare
SMa0312 -0.8 -2.6 hypothetical protein compare
SMc03184 -0.8 -1.1 PH adaptation potassium efflux system G transmembrane protein compare
SMc01097 -0.8 -2.9 hypothetical protein compare
SM_b22001 -0.8 -0.9 hypothetical protein compare
SMc01147 -0.8 -1.2 coproporphyrinogen III oxidase compare
SMa1002 -0.8 -1.4 hypothetical protein compare
SM_b20387 -0.8 -1.1 transcriptional regulator compare
SM_b21174 -0.8 -2.1 phosphate uptake ABC transporter permease compare
SM_b21479 -0.8 -1.7 hypothetical protein compare
SMc04045 -0.8 -4.0 dihydroxy-acid dehydratase compare
SMa0448 -0.8 -1.4 hypothetical protein compare
SMc02052 -0.8 -0.7 hypothetical protein compare
SMc01853 -0.7 -2.2 hypothetical protein compare
SMa0121 -0.7 -1.8 hypothetical protein compare
SM_b20006 -0.7 -2.0 hypothetical protein compare
SMc03258 -0.7 -3.8 transcriptional regulator compare
SMa5011 -0.7 -1.6 oxidoreductase compare
SMc04121 -0.7 -1.3 uracil phosphoribosyltransferase compare
SMc02941 -0.7 -2.4 hypothetical protein compare
SMc02862 -0.7 -2.3 Pit accessory protein compare
SMc00466 -0.7 -2.0 hypothetical protein compare
SMa0810 -0.7 -2.4 nitrogen fixation protein FixU compare
SMc00641 -0.7 -3.4 D-3-phosphoglycerate dehydrogenase compare
SM_b21213 -0.7 -2.6 serinethreonine protein phosphatase compare
SMc03279 -0.7 -1.3 transposase number 2 for insertion sequence ISRM28 compare
SMc01216 -0.7 -1.5 hypothetical protein compare
SMa1913 -0.7 -2.6 Na+/H+ antiporter compare
SM_b21035 -0.7 -2.1 hypothetical protein compare
SMa0816 -0.7 -1.2 FixX ferredoxin-like protein compare
SMa0861 -0.7 -1.6 transposase, fragment compare
SMc01494 -0.7 -3.5 phosphoserine phosphatase compare
SMa0846 -0.7 -0.8 transposase, fragment compare
SMc01342 -0.7 -2.0 hypothetical protein compare
SM_b21177 -0.7 -2.4 phosphate uptake ABC transporter ATP-binding protein compare
SM_b21485 -0.7 -1.5 hypothetical protein compare
SMc02714 -0.7 -0.9 hypothetical protein compare
SMc02543 -0.7 -3.0 hypothetical protein compare
SMa0754 -0.7 -1.3 hypothetical protein compare
SM_b20823 -0.7 -3.3 cell surface saccharide synthesis protein compare
SMc03827 -0.7 -2.1 amino acid efflux transmembrane protein compare
SMc02497 -0.7 -1.6 hypothetical protein compare
SM_b20098 -0.7 -3.3 hypothetical protein compare
SMa1008 -0.7 -1.6 hypothetical protein compare
SMc00719 -0.7 -1.6 hypoxanthine-guanine phosphoribosyltransferase compare
SMc01606 -0.7 -3.2 permease compare
SMc01644 -0.7 -1.3 ABC transporter permease compare
SM_b20176 -0.7 -2.2 hypothetical protein compare
SMc03281 -0.7 -2.8 transposase compare
SMc00804 -0.7 -1.3 hypothetical protein compare
SMc02287 -0.7 -1.6 DNA-invertase compare
SMc01975 -0.7 -2.4 transcriptional regulator compare
SMc00876 -0.7 -1.8 ATP-binding MRP protein compare
SMc00982 -0.6 -2.3 dioxygenase compare
SMc02659 -0.6 -1.6 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SM_b20184 -0.6 -1.6 ABC transporter ATP-binding protein compare
SMa1780 -0.6 -2.5 hypothetical protein compare
SMa2347 -0.6 -3.0 hypothetical protein compare
SMc03288 -0.6 -2.7 hypothetical protein compare
SMc00987 -0.6 -1.1 hypothetical protein compare
SMa0851 -0.6 -1.7 NodH sulfotransferase compare
SMc00691 -0.6 -1.5 site-specific tyrosine recombinase XerD compare
SMa1063 -0.6 -1.4 hypothetical protein compare
SMa1050 -0.6 -3.0 hypothetical protein compare
SM_b20226 -0.6 -1.1 hypothetical protein compare
SMc00711 -0.6 -1.7 cyclohexadienyl dehydrogenase compare
SM_b21665 -0.6 -1.5 hypothetical protein compare
SMa5024 -0.6 -1.5 hypothetical protein compare
SMc01007 -0.6 -1.2 hypothetical protein compare
SMc01949 -0.6 -2.1 high-affinity branched-chain amino acid ABC transporter ATP-binding protein compare
SMa2113 -0.6 -1.6 glutathione-dependent dehydrogenase compare
SMc02755 -0.6 -2.4 S-adenosyl-L-homocysteine hydrolase compare
SMc01801 -0.6 -1.9 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00788 -0.6 -2.2 peptide ABC transporter permease compare
SMc01364 -0.6 -0.8 DNA topoisomerase I compare
SMa2215 -0.6 -1.5 GntR family transcriptional regulator compare
SMc02713 -0.6 -0.9 RNA polymerase sigma-E factor (sigma-24) protein compare
SM_b21359 -0.6 -1.1 LysR family transcriptional regulator compare
SMc01774 -0.6 -1.7 hypothetical protein compare
SMc02172 -0.6 -3.0 transcriptional regulator compare
SMc00650 -0.6 -0.8 hypothetical protein compare
SMc03978 -0.6 -0.7 transketolase compare
SMa0645 -0.6 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a-hepes control experiments