Experiment set18IT039 for Sinorhizobium meliloti 1021

Compare to:

R2A-HEPES control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMc02766 -5.0 -19.6 tryptophan synthase subunit beta compare
SMc02767 -4.6 -11.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02765 -4.6 -13.6 tryptophan synthase subunit alpha compare
SMc00235 -4.5 -9.8 anthranilate phosphoribosyltransferase compare
SMc00236 -4.3 -4.1 Indole-3-glycerol phosphate synthase compare
SMc02725 -4.0 -13.7 anthranilate synthase compare
SMc00017 -3.7 -2.0 homoserine kinase compare
SM_b20810 -3.6 -23.2 membrane-located cell surface saccharide acetylase compare
SMa1635 -3.5 -3.0 hypothetical protein compare
SMc01881 -3.4 -3.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00427 -3.3 -2.2 peptide chain release factor RF-3 protein compare
SMc01360 -2.5 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc00917 -2.4 -4.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc01153 -2.2 -2.2 enoyl-CoA hydratase compare
SMc01004 -2.2 -8.8 phosphoribosyl-AMP cyclohydrolase compare
SMc01361 -2.2 -3.5 dihydroorotase compare
SMc02569 -2.1 -4.2 imidazole glycerol phosphate synthase subunit HisF compare
SMc03763 -2.0 -1.4 cytosine-specific methyltransferase compare
SMc02570 -2.0 -5.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc01880 -2.0 -1.8 pantoate--beta-alanine ligase compare
SMc02435 -1.9 -1.8 methyltransferase compare
SMc03229 -1.9 -2.4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00918 -1.9 -9.2 ATP phosphoribosyltransferase regulatory subunit compare
SMc01222 -1.7 -8.6 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc03826 -1.7 -1.1 argininosuccinate synthase compare
SMc02572 -1.7 -6.5 imidazole glycerol phosphate synthase subunit HisH compare
SMc02245 -1.6 -5.4 dihydroorotate dehydrogenase 2 compare
SMc02165 -1.6 -5.7 orotate phosphoribosyltransferase compare
SMc00067 -1.5 -6.2 outer-membranne lipoprotein compare
SMc02166 -1.5 -6.6 dihydroorotase compare
SMc03978 -1.4 -1.0 transketolase compare
SMc02234 -1.4 -2.0 hypothetical protein compare
SM_b20294 -1.4 -1.4 transcriptional regulator NanR compare
SMc03839 -1.4 -1.6 hypothetical protein compare
SMc00412 -1.4 -3.8 orotidine 5'-phosphate decarboxylase compare
SMc03069 -1.3 -1.6 6-phosphogluconolactonase compare
SMc02050 -1.3 -2.9 trigger factor compare
SMc00963 -1.2 -1.6 hypothetical protein compare
SMa0645 -1.2 -2.5 hypothetical protein compare
SM_b20814 -1.2 -7.0 hypothetical protein compare
SMc00859 -1.2 -1.9 hypothetical protein compare
SMc01147 -1.2 -1.7 coproporphyrinogen III oxidase compare
SMa0753 -1.2 -1.0 hypothetical protein compare
SMc02107 -1.2 -1.4 hypothetical protein compare
SMc00579 -1.2 -3.7 dimethyladenosine transferase compare
SMc01441 -1.1 -3.9 membrane bound protease compare
SMc01929 -1.1 -1.8 hypothetical protein compare
SMc04327 -1.1 -1.4 hypothetical protein compare
SM_b20994 -1.1 -4.3 hypothetical protein compare
SMc02137 -1.1 -3.3 ornithine carbamoyltransferase compare
SMc01223 -1.1 -2.4 transcriptional regulator compare
SM_b20882 -1.1 -1.9 hypothetical protein compare
SMa5011 -1.1 -2.6 oxidoreductase compare
SMc04432 -1.1 -3.5 hypothetical protein compare
SMc01858 -1.1 -1.0 S-adenosyl-methyltransferase MraW compare
SMc01800 -1.1 -0.6 cytochrome C oxidase assembly transmembrane protein compare
SMc02714 -1.1 -1.4 hypothetical protein compare
SMc02058 -1.1 -2.7 YAJC protein compare
SMc02055 -1.1 -0.9 phytoene synthase compare
SMc02755 -1.0 -3.8 S-adenosyl-L-homocysteine hydrolase compare
SM_b20948 -1.0 -1.6 glucosyltransferase compare
SMc04346 -1.0 -3.2 ketol-acid reductoisomerase compare
SMc02425 -1.0 -2.2 transcriptional regulator compare
SMc02799 -1.0 -2.9 16S rRNA methyltransferase GidB compare
SMc02897 -1.0 -1.9 cytochrome C transmembrane protein compare
SM_b21177 -1.0 -4.9 phosphate uptake ABC transporter ATP-binding protein compare
SMc00450 -1.0 -0.7 protoheme IX farnesyltransferase compare
SMc02115 -1.0 -0.8 hypothetical protein compare
SM_b20752 -1.0 -3.5 3-hydroxyisobutyryl-CoA hydrolase compare
SMc01007 -1.0 -1.8 hypothetical protein compare
SMc03184 -1.0 -1.5 PH adaptation potassium efflux system G transmembrane protein compare
SMc00711 -1.0 -3.2 cyclohexadienyl dehydrogenase compare
SMc03066 -1.0 -1.9 hypothetical protein compare
SMc04296 -1.0 -0.7 cell division protein FtsZ compare
SMa1400 -0.9 -3.4 acyl-CoA dehydrogenase compare
SMc01974 -0.9 -2.0 transcriptional regulator compare
SMc00815 -0.9 -1.1 inosine 5'-monophosphate dehydrogenase compare
SMc00856 -0.9 -1.0 hypothetical protein compare
SMc02980 -0.9 -1.3 hypothetical protein compare
SM_b20701 -0.9 -1.1 hypothetical protein compare
SMc03158 -0.9 -1.9 ABC transporter permease compare
SM_b20809 -0.9 -3.0 arabinose-5-phosphate isomerase compare
SMc01206 -0.9 -0.5 queuine tRNA-ribosyltransferase compare
SMa0312 -0.9 -3.4 hypothetical protein compare
SM_b21026 -0.9 -3.1 exopeptide compare
SMc03967 -0.8 -0.7 Holliday junction resolvase compare
SMa0861 -0.8 -2.2 transposase, fragment compare
SMa0964 -0.8 -2.5 hypothetical protein compare
SMc02543 -0.8 -4.0 hypothetical protein compare
SMc02287 -0.8 -1.6 DNA-invertase compare
SMc02307 -0.8 -3.7 histidinol dehydrogenase compare
SMc03140 -0.8 -2.8 transcriptional regulator compare
SMc02102 -0.8 -1.9 hypothetical protein compare
SMc00712 -0.8 -1.3 hypothetical protein compare
SMc00053 -0.8 -0.5 monovalent cation/H+ antiporter subunit C compare
SMc02866 -0.8 -2.5 transcriptional regulator compare
SMc03070 -0.8 -3.5 glucose-6-phosphate 1-dehydrogenase compare
SMc01364 -0.8 -1.1 DNA topoisomerase I compare
SMc01260 -0.8 -2.6 transcriptional regulator compare
SMc00565 -0.8 -0.9 50S ribosomal protein L9 compare
SMa1697 -0.8 -1.0 hypothetical protein compare
SMa0520 -0.8 -3.2 RpiR family transcriptional regulator compare
SMc01347 -0.8 -2.6 hypothetical protein compare
SMc04174 -0.7 -1.4 signal peptide protein compare
SMc02574 -0.7 -1.8 imidazoleglycerol-phosphate dehydratase compare
SMc01613 -0.7 -2.2 ribose-5-phosphate isomerase B compare
SMc00293 -0.7 -4.1 homoserine dehydrogenase compare
SMa1595 -0.7 -2.0 hypothetical protein compare
SMc02451 -0.7 -1.0 hypothetical protein compare
SMc03850 -0.7 -0.5 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02683 -0.7 -0.9 hypothetical protein compare
SMc03996 -0.7 -2.8 thiamine-phosphate pyrophosphorylase compare
SMc02858 -0.7 -0.4 chaperone protein DnaJ compare
SMc00361 -0.7 -2.2 hypothetical protein compare
SMc01337 -0.7 -1.2 hypothetical protein compare
SMc03281 -0.7 -4.0 transposase compare
SMc00085 -0.7 -2.0 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SM_b21181 -0.7 -3.6 glutaryl-CoA dehydrogenase compare
SMc03100 -0.7 -0.8 hypothetical protein compare
SMa1639 -0.7 -1.3 hypothetical protein compare
SMc00641 -0.7 -3.2 D-3-phosphoglycerate dehydrogenase compare
SMc01595 -0.7 -2.2 sensor histidine kinase transmembrane protein compare
SMc02787 -0.7 -1.7 hypothetical protein compare
SMc01801 -0.7 -1.9 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02861 -0.7 -1.3 phosphate transporter compare
SMc01606 -0.7 -3.1 permease compare
SMc00982 -0.7 -2.3 dioxygenase compare
SMc04045 -0.7 -3.6 dihydroxy-acid dehydratase compare
SMc02978 -0.7 -1.7 hypothetical protein compare
SMc00295 -0.7 -0.8 hypothetical protein compare
SM_b21035 -0.7 -2.6 hypothetical protein compare
SMc03774 -0.7 -1.9 hypothetical protein compare
SMc02582 -0.7 -1.6 hypothetical protein compare
SMc02838 -0.6 -2.5 phosphoglyceromutase compare
SM_b20880 -0.6 -3.1 ATP-dependent RNA helicase compare
SMc02909 -0.6 -1.0 transglycosylase transmembrane protein compare
SMc02862 -0.6 -3.1 Pit accessory protein compare
SMc00821 -0.6 -1.1 hypothetical protein compare
SMc00496 -0.6 -1.0 hypothetical protein compare
SMc01757 -0.6 -1.9 hypothetical protein compare
SMc02786 -0.6 -3.9 translocase transmembrane protein compare
SMc01107 -0.6 -4.0 hypothetical protein compare
SM_b20411 -0.6 -1.9 hypothetical protein compare
SM_b20184 -0.6 -0.9 ABC transporter ATP-binding protein compare
SM_b21174 -0.6 -2.4 phosphate uptake ABC transporter permease compare
SM_b21115 -0.6 -1.4 response regulator protein compare
SMc02941 -0.6 -2.8 hypothetical protein compare
SMa1442 -0.6 -2.8 GntR family transcriptional regulator compare
SMc01607 -0.6 -3.7 permease compare
SM_b20904 -0.6 -2.3 sugar uptake ABC transporter ATP-binding protein compare
SMc00800 -0.6 -0.7 hypothetical protein compare
SMc02707 -0.6 -2.4 hypothetical protein compare
SMa1929 -0.6 -3.1 hypothetical protein compare
SMa1174 -0.6 -0.9 hypothetical protein compare
SM_b20139 -0.6 -2.4 hypothetical protein compare
SMc01516 -0.6 -1.8 hypothetical protein compare
SMc03899 -0.6 -0.8 hypothetical protein compare
SMc01438 -0.6 -1.8 protease precursor signal peptide protein compare
SMc04085 -0.6 -2.1 hypothetical protein compare
SMa1586 -0.6 -2.1 SyrB2 regulator compare
SMc00554 -0.6 -3.0 amidophosphoribosyltransferase compare
SM_b20105 -0.6 -1.2 transcriptional regulator compare
SMc01852 -0.6 -3.6 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMa2167 -0.6 -3.1 hypothetical protein compare
SMa0750 -0.6 -2.6 LysR family transcriptional regulator compare
SMa0771 -0.6 -1.3 hypothetical protein compare
SMc02448 -0.6 -2.1 mutator protein 7,8-dihydro-8-oxoguanine-triphosphatase compare
SMc02362 -0.6 -0.5 cytochrome c-type biogenesis protein CcmE compare
SMc01242 -0.6 -0.8 signal peptide protein compare
SMa1053 -0.6 -1.0 hypothetical protein compare
SMc01440 -0.6 -2.0 hydrolase serine protease transmembrane protein compare
SMa0775 -0.6 -3.6 hypothetical protein compare
SM_b20323 -0.6 -0.8 transcriptional regulator compare
SM_b21501 -0.6 -1.4 hypothetical protein compare
SMa0659 -0.6 -1.4 cytochrome c binding protein, carboxyl terminus compare
SMc03124 -0.6 -1.4 periplasmic binding ABC transporter protein compare
SMc04453 -0.6 -0.9 hypothetical protein compare
SMa0267 -0.6 -2.6 GntR family transcriptional regulator compare
SMc01724 -0.6 -1.1 hypothetical protein compare
SM_b20750 -0.6 -1.3 dehydrogenase compare
SMc01434 -0.6 -2.7 hypothetical protein compare
SMc01124 -0.6 -3.2 PII uridylyl-transferase compare
SMc02246 -0.6 -0.3 hypothetical protein compare
SMa0846 -0.6 -0.8 transposase, fragment compare
SMc00280 -0.6 -2.3 hypothetical protein compare
SMa0431 -0.5 -1.0 hypothetical protein compare
SMc00416 -0.5 -2.3 hypothetical protein compare
SM_b21176 -0.5 -1.6 phosphate uptake ABC transporter substrate-binding protein precursor compare
SM_b21591 -0.5 -1.4 GntR family transcriptional regulator compare
SMc02659 -0.5 -1.4 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SM_b20909 -0.5 -1.1 hypothetical protein compare
SMa0857 -0.5 -1.8 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase compare
SMa1002 -0.5 -0.9 hypothetical protein compare
SMa0249 -0.5 -1.2 TRAP-type small permease component compare
SMa0189 -0.5 -2.0 hypothetical protein compare
SMc02434 -0.5 -1.8 hypothetical protein compare
SMc01494 -0.5 -3.7 phosphoserine phosphatase compare
SMc02407 -0.5 -2.8 hypothetical protein compare
SM_b20387 -0.5 -1.0 transcriptional regulator compare
SMc02636 -0.5 -1.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a-hepes control experiments