Experiment set18IT037 for Sinorhizobium meliloti 1021

Compare to:

R2A-HEPES control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMc02767 -5.6 -11.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00236 -5.5 -7.6 Indole-3-glycerol phosphate synthase compare
SMc00235 -5.4 -11.5 anthranilate phosphoribosyltransferase compare
SMc02766 -4.8 -20.6 tryptophan synthase subunit beta compare
SMc02765 -4.5 -13.3 tryptophan synthase subunit alpha compare
SMc02725 -4.2 -15.5 anthranilate synthase compare
SMc00017 -3.8 -2.0 homoserine kinase compare
SMa1635 -3.7 -2.9 hypothetical protein compare
SM_b20810 -3.5 -24.2 membrane-located cell surface saccharide acetylase compare
SMc00815 -3.0 -1.9 inosine 5'-monophosphate dehydrogenase compare
SMc01153 -2.8 -2.2 enoyl-CoA hydratase compare
SMc00619 -2.6 -1.8 hypothetical protein compare
SMc02569 -2.5 -3.6 imidazole glycerol phosphate synthase subunit HisF compare
SMc01881 -2.3 -3.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00963 -2.2 -2.1 hypothetical protein compare
SMc02570 -2.2 -7.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc01361 -2.2 -3.5 dihydroorotase compare
SMc01004 -2.1 -11.8 phosphoribosyl-AMP cyclohydrolase compare
SMc03763 -2.1 -1.4 cytosine-specific methyltransferase compare
SMc00067 -2.1 -9.8 outer-membranne lipoprotein compare
SMc01360 -2.1 -2.7 aspartate carbamoyltransferase catalytic subunit compare
SMc00918 -2.1 -9.3 ATP phosphoribosyltransferase regulatory subunit compare
SMc01222 -2.0 -10.1 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02572 -1.9 -4.9 imidazole glycerol phosphate synthase subunit HisH compare
SMc02909 -1.8 -2.0 transglycosylase transmembrane protein compare
SMc04224 -1.7 -2.1 hypothetical protein compare
SMc00012 -1.7 -1.4 cytochrome C oxidase assembly protein compare
SMc03967 -1.6 -1.3 Holliday junction resolvase compare
SMc00917 -1.5 -4.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc01242 -1.5 -1.9 signal peptide protein compare
SMc03850 -1.5 -0.7 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02714 -1.5 -1.7 hypothetical protein compare
SMc01845 -1.4 -1.7 transglycosylase transmembrane protein compare
SMc02245 -1.4 -5.4 dihydroorotate dehydrogenase 2 compare
SMc00013 -1.4 -1.7 cytochrome C oxidase subunit III transmembrane protein compare
SMa1002 -1.4 -2.5 hypothetical protein compare
SMc01880 -1.4 -1.7 pantoate--beta-alanine ligase compare
SMc03069 -1.4 -1.6 6-phosphogluconolactonase compare
SMc02165 -1.3 -5.3 orotate phosphoribosyltransferase compare
SMc04346 -1.3 -4.9 ketol-acid reductoisomerase compare
SM_b20814 -1.3 -7.9 hypothetical protein compare
SMc00412 -1.2 -3.1 orotidine 5'-phosphate decarboxylase compare
SMc01223 -1.2 -2.7 transcriptional regulator compare
SMc02234 -1.2 -2.0 hypothetical protein compare
SMc02115 -1.2 -0.9 hypothetical protein compare
SMc03100 -1.2 -1.3 hypothetical protein compare
SMc02166 -1.1 -5.9 dihydroorotase compare
SMc02137 -1.1 -3.4 ornithine carbamoyltransferase compare
SM_b21479 -1.1 -2.4 hypothetical protein compare
SMc03801 -1.1 -1.9 thioredoxin protein compare
SMa0431 -1.0 -1.6 hypothetical protein compare
SMc04432 -1.0 -3.7 hypothetical protein compare
SMc01471 -1.0 -2.1 cytochrome C oxidase assembly factor transmembrane protein compare
SMc02307 -1.0 -4.3 histidinol dehydrogenase compare
SM_b20809 -1.0 -2.9 arabinose-5-phosphate isomerase compare
SMc00876 -1.0 -2.4 ATP-binding MRP protein compare
SM_b21176 -0.9 -3.5 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc04454 -0.9 -3.5 ABC transporter ATP-binding protein compare
SMc01091 -0.9 -1.9 hypothetical protein compare
SMc00650 -0.9 -1.6 hypothetical protein compare
SMc03826 -0.9 -1.0 argininosuccinate synthase compare
SMc03006 -0.9 -1.1 chemotaxis regulator protein compare
SMc02425 -0.9 -2.9 transcriptional regulator compare
SMc02543 -0.9 -3.4 hypothetical protein compare
SMc00711 -0.9 -2.7 cyclohexadienyl dehydrogenase compare
SMc02495 -0.9 -1.2 translaldolase compare
SMc00361 -0.9 -2.1 hypothetical protein compare
SMc04330 -0.9 -1.4 trimethylamine methyltransferase compare
SMc00495 -0.9 -2.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01440 -0.9 -2.4 hydrolase serine protease transmembrane protein compare
SMc00580 -0.9 -1.7 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02050 -0.9 -2.4 trigger factor compare
SMc01613 -0.9 -3.0 ribose-5-phosphate isomerase B compare
SMa1639 -0.9 -1.5 hypothetical protein compare
SM_b21177 -0.9 -3.9 phosphate uptake ABC transporter ATP-binding protein compare
SMc00496 -0.9 -1.3 hypothetical protein compare
SMc02121 -0.9 -1.5 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc02435 -0.9 -1.1 methyltransferase compare
SMc00641 -0.9 -3.4 D-3-phosphoglycerate dehydrogenase compare
SMc00293 -0.9 -5.4 homoserine dehydrogenase compare
SMc03070 -0.9 -3.9 glucose-6-phosphate 1-dehydrogenase compare
SMc02719 -0.9 -1.0 transposase compare
SMc00427 -0.9 -1.2 peptide chain release factor RF-3 protein compare
SMa0964 -0.8 -1.6 hypothetical protein compare
SMa1597 -0.8 -1.9 Pilus assembly chaperone compare
SMc02574 -0.8 -2.5 imidazoleglycerol-phosphate dehydratase compare
SMc01147 -0.8 -1.4 coproporphyrinogen III oxidase compare
SM_b20323 -0.8 -1.0 transcriptional regulator compare
SMc02051 -0.8 -1.0 hypothetical protein compare
SMc01441 -0.8 -3.3 membrane bound protease compare
SMc01183 -0.8 -0.8 LexA repressor compare
SMc02753 -0.8 -0.7 PTS system transporter subunit IIA compare
SMc00088 -0.8 -1.1 hypothetical protein compare
SMc04453 -0.8 -1.2 hypothetical protein compare
SM_b20837 -0.8 -1.9 hypothetical protein compare
SMc00143 -0.8 -1.1 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
SMc00450 -0.8 -0.7 protoheme IX farnesyltransferase compare
SMc01041 -0.8 -1.7 NIFR3-like protein compare
SMa0189 -0.8 -2.7 hypothetical protein compare
SMa1174 -0.8 -1.8 hypothetical protein compare
SMc03930 -0.7 -1.3 sarcosine oxidase subunit gamma compare
SM_b21115 -0.7 -1.4 response regulator protein compare
SMc00073 -0.7 -1.4 hypothetical protein compare
SMa5007 -0.7 -2.4 transcriptional regulator compare
SMc02978 -0.7 -2.9 hypothetical protein compare
SMc02799 -0.7 -1.0 16S rRNA methyltransferase GidB compare
SMc02906 -0.7 -0.7 hypothetical protein compare
SMc00579 -0.7 -1.9 dimethyladenosine transferase compare
SMc04085 -0.7 -2.1 hypothetical protein compare
SMc02058 -0.7 -1.8 YAJC protein compare
SM_b20143 -0.7 -1.0 oligopeptide ABC transporter permease compare
SMc04045 -0.7 -3.9 dihydroxy-acid dehydratase compare
SMc01494 -0.7 -4.7 phosphoserine phosphatase compare
SM_b20994 -0.7 -2.5 hypothetical protein compare
SM_b20823 -0.7 -4.0 cell surface saccharide synthesis protein compare
SMa0520 -0.7 -3.7 RpiR family transcriptional regulator compare
SMa0740 -0.7 -1.6 hypothetical protein compare
SMc03140 -0.7 -2.5 transcriptional regulator compare
SMc03280 -0.7 -2.2 transposase number 3 for insertion sequence ISRM28 compare
SMc04121 -0.7 -1.3 uracil phosphoribosyltransferase compare
SMc00856 -0.6 -0.8 hypothetical protein compare
SMa0760 -0.6 -1.5 FixT2 anti-kinase compare
SMc01605 -0.6 -3.3 periplasmic binding ABC transporter protein compare
SM_b20294 -0.6 -1.0 transcriptional regulator NanR compare
SMc02362 -0.6 -0.6 cytochrome c-type biogenesis protein CcmE compare
SMc02434 -0.6 -2.3 hypothetical protein compare
SMc04239 -0.6 -3.0 hypothetical protein compare
SMc00295 -0.6 -0.7 hypothetical protein compare
SMc01607 -0.6 -3.9 permease compare
SMc01160 -0.6 -1.0 hypothetical protein compare
SMc00494 -0.6 -1.2 phosphoribosylformylglycinamidine synthase subunit PurS compare
SM_b20773 -0.6 -1.8 GntR family transcriptional regulator compare
SMc02755 -0.6 -2.9 S-adenosyl-L-homocysteine hydrolase compare
SMa2251 -0.6 -2.7 hypothetical protein compare
SMc03258 -0.6 -3.5 transcriptional regulator compare
SMc01606 -0.6 -2.9 permease compare
SMc00416 -0.6 -3.6 hypothetical protein compare
SMc00640 -0.6 -3.4 phosphoserine aminotransferase compare
SMc03128 -0.6 -1.5 ABC transporter permease compare
SMc05009 -0.6 -1.2 nodulation protein NolR compare
SMa2347 -0.6 -3.1 hypothetical protein compare
SMa0265 -0.6 -1.6 dehydrogenase compare
SM_b20948 -0.6 -1.0 glucosyltransferase compare
SMa0861 -0.6 -1.5 transposase, fragment compare
SMa1365 -0.6 -1.1 ATP-binding protein compare
SMc04401 -0.6 -1.8 transcriptional regulator compare
SMa1008 -0.6 -2.5 hypothetical protein compare
SMa1323 -0.6 -1.1 Transcription regulator compare
SMc00281 -0.6 -1.9 signal peptide protein compare
SMc02287 -0.6 -1.1 DNA-invertase compare
SMc02582 -0.6 -1.7 hypothetical protein compare
SMc00010 -0.6 -0.7 cytochrome C oxidase polypeptide I transmembrane protein compare
SM_b20148 -0.6 -1.9 transcriptional regulator compare
SMc01144 -0.6 -2.2 ribonuclease PH compare
SMc02647 -0.6 -1.3 transcriptional regulator compare
SMc03974 -0.6 -1.8 hypothetical protein compare
SMc03748 -0.6 -2.9 hypothetical protein compare
SMc02639 -0.6 -1.1 transcriptional regulator compare
SM_b20663 -0.6 -1.3 hypothetical protein compare
SMc02941 -0.6 -2.6 hypothetical protein compare
SMc01569 -0.5 -0.2 carbamoyl phosphate synthase small subunit compare
SMc01215 -0.5 -0.4 carbamoyl phosphate synthase large subunit compare
SMc02238 -0.5 -1.1 hypothetical protein compare
SMc01853 -0.5 -2.8 hypothetical protein compare
SM_b20448 -0.5 -1.6 hypothetical protein compare
SMc05020 -0.5 -1.2 entericidin A precursor compare
SM_b20290 -0.5 -2.0 transcriptional regulator compare
SMc00823 -0.5 -1.2 hypothetical protein compare
SMc03824 -0.5 -1.7 transcriptional regulator compare
SMc02862 -0.5 -2.4 Pit accessory protein compare
SMc01981 -0.5 -1.9 cytochrome C transmembrane protein compare
SMa1808 -0.5 -2.2 hypothetical protein compare
SM_b21678 -0.5 -1.9 hypothetical protein compare
SM_b20069 -0.5 -3.5 amino acid carrier protein compare
SMc02520 -0.5 -3.0 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc01930 -0.5 -0.9 hypothetical protein compare
SM_b20114 -0.5 -0.9 hypothetical protein compare
SMc00489 -0.5 -1.9 hypothetical protein compare
SM_b20752 -0.5 -2.7 3-hydroxyisobutyryl-CoA hydrolase compare
SMa0357 -0.5 -2.2 hypothetical protein compare
SMc01427 -0.5 -0.9 hypothetical protein compare
SMc01368 -0.5 -2.0 transport transmembrane protein compare
SMc01187 -0.5 -0.9 rare lipoprotein A compare
SMc00166 -0.5 -0.5 oxidoreductase NAD protein compare
SMc02636 -0.5 -2.0 hypothetical protein compare
SM_b21175 -0.5 -1.6 phosphate uptake ABC transporter permease compare
SMa1166 -0.5 -1.5 hydrolase compare
SMc01668 -0.5 -1.7 transcriptional regulator compare
SMa0190 -0.5 -1.9 transcriptional regulator compare
SM_b21181 -0.5 -2.3 glutaryl-CoA dehydrogenase compare
SMc01207 -0.5 -0.9 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc03028 -0.5 -1.1 flagellar basal body rod protein FlgC compare
SMc00331 -0.5 -2.5 hypothetical protein compare
SMc04327 -0.5 -0.7 hypothetical protein compare
SMa0953 -0.5 -2.8 ABC transporter ATP-binding protein compare
SMc01438 -0.5 -1.7 protease precursor signal peptide protein compare
SMa2143 -0.5 -2.5 5,10-methylenetetrahydrofolate reductase compare
SMa0545 -0.5 -1.9 hypothetical protein compare
SMc02576 -0.5 -0.9 acetyltransferase compare
SMc02328 -0.5 -2.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a-hepes control experiments