Experiment set18IT036 for Sinorhizobium meliloti 1021

Compare to:

R2A control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMc01207 -3.1 -2.1 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SM_b20294 -3.0 -1.3 transcriptional regulator NanR compare
SMc02234 -2.8 -2.5 hypothetical protein compare
SMa1002 -2.7 -2.3 hypothetical protein compare
SMc00712 -2.5 -2.1 hypothetical protein compare
SMc00010 -2.2 -1.9 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02435 -2.1 -1.4 methyltransferase compare
SMa1174 -2.1 -2.3 hypothetical protein compare
SMc01183 -2.0 -0.8 LexA repressor compare
SMc02858 -2.0 -0.6 chaperone protein DnaJ compare
SMc02115 -1.8 -0.8 hypothetical protein compare
SMc02753 -1.8 -0.8 PTS system transporter subunit IIA compare
SMc03763 -1.7 -1.2 cytosine-specific methyltransferase compare
SMc00579 -1.7 -3.2 dimethyladenosine transferase compare
SM_b20948 -1.7 -1.4 glucosyltransferase compare
SMc02266 -1.6 -1.6 hypothetical protein compare
SMc02767 -1.6 -8.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc03863 -1.6 -2.5 50S ribosomal protein L19 compare
SMc00492 -1.6 -0.7 hypothetical protein compare
SMa2034 -1.5 -1.7 hypothetical protein compare
SMc01208 -1.5 -2.4 peptidyl-prolyl cis-trans isomerase B protein compare
SMa1697 -1.5 -2.1 hypothetical protein compare
SMc03899 -1.5 -1.1 hypothetical protein compare
SMa1666 -1.5 -3.5 hypothetical protein compare
SMc02495 -1.5 -1.1 translaldolase compare
SMc01568 -1.5 -1.1 hypothetical protein compare
SMc02866 -1.5 -1.7 transcriptional regulator compare
SMc01153 -1.4 -1.2 enoyl-CoA hydratase compare
SMc03826 -1.4 -1.0 argininosuccinate synthase compare
SMc02766 -1.4 -9.9 tryptophan synthase subunit beta compare
SMc01364 -1.4 -1.1 DNA topoisomerase I compare
SM_b20117 -1.4 -2.7 sugar transferase compare
SMc02084 -1.4 -0.7 biopolymer transport transmembrane protein compare
SMc00665 -1.3 -1.9 hypothetical protein compare
SMc00859 -1.3 -1.9 hypothetical protein compare
SMc04121 -1.3 -1.5 uracil phosphoribosyltransferase compare
SMa0964 -1.3 -2.7 hypothetical protein compare
SMa0754 -1.3 -1.2 hypothetical protein compare
SM_b20909 -1.3 -2.1 hypothetical protein compare
SMc03008 -1.3 -1.0 chemotaxis protein compare
SMa0753 -1.3 -0.8 hypothetical protein compare
SMa0643 -1.3 -1.4 transposase compare
SMc01880 -1.3 -1.7 pantoate--beta-alanine ligase compare
SMc00959 -1.3 -1.2 hypothetical protein compare
SMc00236 -1.2 -3.9 Indole-3-glycerol phosphate synthase compare
SMc02765 -1.2 -7.2 tryptophan synthase subunit alpha compare
SM_b20810 -1.2 -9.9 membrane-located cell surface saccharide acetylase compare
SMc01222 -1.2 -4.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01522 -1.2 -1.1 hypothetical protein compare
SMc00353 -1.2 -1.5 transmembrane protein compare
SMc02137 -1.2 -2.8 ornithine carbamoyltransferase compare
SMc03967 -1.2 -0.7 Holliday junction resolvase compare
SMc04239 -1.2 -2.1 hypothetical protein compare
SMa0050 -1.1 -2.1 hypothetical protein compare
SMc02144 -1.1 -1.3 phosphate ABC transporter permease compare
SMc00229 -1.1 -3.7 hypothetical protein compare
SMc00588 -1.1 -1.8 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc02520 -1.1 -4.8 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc02647 -1.1 -1.6 transcriptional regulator compare
SMa0734 -1.1 -1.2 hypothetical protein compare
SM_b20750 -1.1 -1.4 dehydrogenase compare
SMc02143 -1.1 -2.4 phosphate ABC transporter permease compare
SMa1099 -1.1 -2.2 CycB1 cytochrome c-552 precursor compare
SMc03941 -1.1 -1.4 hypothetical protein compare
SMc00187 -1.1 -1.8 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SM_b21633 -1.1 -0.9 enoyl-CoA hydratase compare
SMc00823 -1.1 -1.5 hypothetical protein compare
SMc01933 -1.1 -0.8 hypothetical protein compare
SMc01351 -1.1 -2.0 hypothetical protein compare
SM_b21406 -1.0 -3.4 hypothetical protein compare
SMc00099 -1.0 -1.6 alkylphosphonate uptake protein compare
SMc04330 -1.0 -1.2 trimethylamine methyltransferase compare
SMa1136 -1.0 -2.3 hypothetical protein compare
SMc00982 -1.0 -2.8 dioxygenase compare
SMc02055 -1.0 -1.1 phytoene synthase compare
SMc02799 -1.0 -2.1 16S rRNA methyltransferase GidB compare
SMa0748 -1.0 -0.9 MucR family transcriptional regulator compare
SM_b21173 -1.0 -1.1 hypothetical protein compare
SMc00329 -1.0 -2.4 iron response regulator protein compare
SMc01438 -1.0 -2.8 protease precursor signal peptide protein compare
SMc00235 -1.0 -3.5 anthranilate phosphoribosyltransferase compare
SMc02052 -1.0 -0.7 hypothetical protein compare
SMc02102 -1.0 -1.9 hypothetical protein compare
SMc02036 -1.0 -1.7 transcriptional regulator compare
SMc01939 -1.0 -0.9 urease subunit beta compare
SMa1700 -1.0 -0.8 hypothetical protein compare
SM_b20375 -1.0 -1.5 transcriptional regulator compare
SMc02707 -1.0 -2.3 hypothetical protein compare
SMa1201 -1.0 -1.6 hypothetical protein compare
SMc03006 -1.0 -0.8 chemotaxis regulator protein compare
SM_b21669 -1.0 -1.4 hypothetical protein compare
SMa0645 -1.0 -1.5 hypothetical protein compare
SMc00928 -1.0 -0.7 signal peptide protein compare
SMc02724 -1.0 -1.4 hypothetical protein compare
SMc01800 -0.9 -0.4 cytochrome C oxidase assembly transmembrane protein compare
SMc00821 -0.9 -1.1 hypothetical protein compare
SMa1635 -0.9 -1.2 hypothetical protein compare
SM_b21156 -0.9 -2.9 hypothetical protein compare
SMa1894 -0.9 -1.3 methionine sulfoxide reductase B compare
SMc00349 -0.9 -3.3 GTP-binding protein LepA compare
SMa0886 -0.9 -0.7 hypothetical protein compare
SMa0805 -0.9 -3.1 GabD4 succinate-semialdehyde dehdyrogenase compare
SMc03184 -0.9 -0.7 PH adaptation potassium efflux system G transmembrane protein compare
SMc00815 -0.9 -0.8 inosine 5'-monophosphate dehydrogenase compare
SMc01242 -0.9 -1.0 signal peptide protein compare
SM_b20837 -0.9 -1.9 hypothetical protein compare
SMc03883 -0.9 -2.6 monofunctional biosynthetic peptidoglycan transglycosylase compare
SM_b22001 -0.9 -1.1 hypothetical protein compare
SMc00451 -0.9 -3.1 processing protease compare
SMc01119 -0.9 -1.1 hypothetical protein compare
SMc04242 -0.9 -1.0 zinc uptake regulation protein compare
SMc00555 -0.9 -0.7 colicin V production transmembrane protein compare
SMc03949 -0.9 -3.2 nitrogen regulatory protein compare
SMc02333 -0.8 -1.4 hypothetical protein compare
SM_b20752 -0.8 -2.8 3-hydroxyisobutyryl-CoA hydrolase compare
SMc03293 -0.8 -1.2 hypothetical protein compare
SMc00404 -0.8 -0.6 hypothetical protein compare
SMc02755 -0.8 -2.8 S-adenosyl-L-homocysteine hydrolase compare
SMc00427 -0.8 -0.9 peptide chain release factor RF-3 protein compare
SMa0326 -0.8 -1.4 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc04881 -0.8 -1.7 virulence associated protein compare
SMc01916 -0.8 -1.2 signal peptide protein compare
SM_b20809 -0.8 -3.6 arabinose-5-phosphate isomerase compare
SMc03249 -0.8 -1.3 hypothetical protein compare
SMc02309 -0.8 -2.3 arsenate reductase compare
SMa1361 -0.8 -1.3 hypothetical protein compare
SMc02077 -0.8 -1.2 exodeoxyribonuclease III protein compare
SMc02141 -0.8 -1.1 phosphate transporter PhoU compare
SMc02095 -0.8 -4.0 hypothetical protein compare
SMc04174 -0.8 -1.0 signal peptide protein compare
SMc02173 -0.8 -0.8 hypothetical protein compare
SMc02615 -0.8 -1.5 signal peptide protein compare
SM_b21310 -0.8 -1.6 hypothetical protein compare
SMa2167 -0.8 -2.5 hypothetical protein compare
SMc02287 -0.8 -2.6 DNA-invertase compare
SMa0166 -0.8 -2.9 hypothetical protein compare
SMc00981 -0.8 -2.3 ferredoxin protein compare
SMa0281 -0.8 -2.6 MerR family transcriptional regulator compare
SMa0769 -0.8 -2.7 FixP2 Diheme c-type cytochrome compare
SMa1654 -0.8 -2.1 GntR family transcriptional regulator compare
SMc00088 -0.8 -0.8 hypothetical protein compare
SMc02231 -0.8 -2.0 hypothetical protein compare
SMc02582 -0.8 -1.3 hypothetical protein compare
SMa2151 -0.8 -2.2 DNA-binding protein compare
SMc04391 -0.7 -1.1 3-ketoacyl-ACP reductase compare
SMc01765 -0.7 -0.8 hypothetical protein compare
SMc01547 -0.7 -2.3 hypothetical protein compare
SMc03981 -0.7 -2.5 phosphoglycerate kinase compare
SMc01223 -0.7 -1.7 transcriptional regulator compare
SMc01434 -0.7 -2.7 hypothetical protein compare
SMa1046 -0.7 -2.4 adenylate cyclase compare
SMc01929 -0.7 -1.0 hypothetical protein compare
SMc02323 -0.7 -1.3 transcriptional regulator compare
SMc00804 -0.7 -1.1 hypothetical protein compare
SM_b20026 -0.7 -1.0 hypothetical protein compare
SMc01433 -0.7 -1.7 hypothetical protein compare
SM_b20547 -0.7 -1.3 hypothetical protein compare
SMa1485 -0.7 -1.9 Permease, MFS compare
SMc04318 -0.7 -2.9 cold shock transcription regulator protein compare
SMc00560 -0.7 -1.5 hypothetical protein compare
SM_b22023 -0.7 -0.9 molecular chaperone GroES compare
SMa0739 -0.7 -2.8 hypothetical protein compare
SM_b20994 -0.7 -1.5 hypothetical protein compare
SMa1960 -0.7 -1.8 hypothetical protein compare
SMa0520 -0.7 -2.2 RpiR family transcriptional regulator compare
SMc03066 -0.7 -1.1 hypothetical protein compare
SM_b20880 -0.7 -3.1 ATP-dependent RNA helicase compare
SMc04460 -0.7 -4.7 glycogen phosphorylase compare
SM_b20323 -0.7 -0.6 transcriptional regulator compare
SMc01089 -0.7 -0.7 hypothetical protein compare
SMa1686 -0.7 -1.9 Two-component response regulator compare
SM_b21667 -0.7 -1.2 hypothetical protein compare
SMc00351 -0.7 -0.8 hypothetical protein compare
SMc04190 -0.7 -1.6 signal peptide protein compare
SMa0206 -0.7 -2.2 Response regulator compare
SMa2169 -0.7 -2.7 hypothetical protein compare
SMc02051 -0.7 -1.2 hypothetical protein compare
SMc04296 -0.7 -0.4 cell division protein FtsZ compare
SMc04405 -0.7 -2.2 3-isopropylmalate dehydrogenase compare
SM_b20290 -0.7 -1.4 transcriptional regulator compare
SMc00108 -0.7 -1.9 acetyltransferase compare
SMa2251 -0.7 -1.5 hypothetical protein compare
SMc02719 -0.7 -0.6 transposase compare
SMa0486 -0.7 -2.5 ornithine cyclodeaminase compare
SMc04428 -0.7 -1.2 hypothetical protein compare
SMc03780 -0.7 -1.4 hypothetical protein compare
SM_b20687 -0.7 -1.8 hypothetical protein compare
SMa1586 -0.7 -2.9 SyrB2 regulator compare
SMc00177 -0.7 -3.3 hypothetical protein compare
SMc00760 -0.7 -1.0 recombinase A compare
SMa1602 -0.7 -3.0 LysR family transcriptional regulator compare
SMc02632 -0.7 -1.7 hypothetical protein compare
SMc00067 -0.7 -2.7 outer-membranne lipoprotein compare
SMc01093 -0.7 -1.8 esterase compare
SMc03878 -0.7 -1.2 acetoacetyl-CoA reductase compare
SMc04345 -0.7 -1.5 hypothetical protein compare
SM_b20983 -0.7 -1.3 hypothetical protein compare
SMc01147 -0.7 -1.0 coproporphyrinogen III oxidase compare
SM_b20814 -0.7 -2.9 hypothetical protein compare
SMc00174 -0.7 -2.9 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment