Experiment set18IT035 for Sinorhizobium meliloti 1021

Compare to:

R2A control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMc04327 -4.9 -1.4 hypothetical protein compare
SMa1700 -4.9 -2.3 hypothetical protein compare
SMa1924 -3.6 -1.0 hypothetical protein compare
SMa5010 -3.6 -1.5 hypothetical protein compare
SMc00013 -3.6 -1.7 cytochrome C oxidase subunit III transmembrane protein compare
SMc02909 -3.4 -2.0 transglycosylase transmembrane protein compare
SMc01939 -3.3 -1.3 urease subunit beta compare
SMc01207 -3.1 -2.0 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00823 -2.9 -2.1 hypothetical protein compare
SMc04330 -2.8 -1.8 trimethylamine methyltransferase compare
SMa0734 -2.8 -2.4 hypothetical protein compare
SMc04453 -2.8 -1.4 hypothetical protein compare
SMc04224 -2.7 -1.5 hypothetical protein compare
SMc02077 -2.7 -2.4 exodeoxyribonuclease III protein compare
SMc00012 -2.6 -1.3 cytochrome C oxidase assembly protein compare
SMc03839 -2.5 -2.0 hypothetical protein compare
SMa1413 -2.5 -2.5 hypothetical protein compare
SMc01091 -2.5 -2.7 hypothetical protein compare
SMc00619 -2.2 -1.2 hypothetical protein compare
SMc00876 -2.1 -4.0 ATP-binding MRP protein compare
SMc00010 -2.1 -1.7 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc04003 -2.0 -1.4 50S ribosomal protein L36 compare
SMc02280 -2.0 -1.6 hypothetical protein compare
SMc00353 -1.9 -1.8 transmembrane protein compare
SMc01880 -1.9 -1.3 pantoate--beta-alanine ligase compare
SMc02858 -1.9 -0.5 chaperone protein DnaJ compare
SMc01568 -1.9 -1.0 hypothetical protein compare
SMc02052 -1.9 -0.9 hypothetical protein compare
SMc02850 -1.9 -1.7 DNA polymerase I compare
SMc02115 -1.8 -0.7 hypothetical protein compare
SMc03878 -1.7 -1.6 acetoacetyl-CoA reductase compare
SM_b20665 -1.7 -3.0 partial transposase of insertion sequence ISRm17 protein compare
SMc00712 -1.7 -1.2 hypothetical protein compare
SMc02614 -1.7 -2.2 hypothetical protein compare
SMc03124 -1.7 -2.5 periplasmic binding ABC transporter protein compare
SMc03763 -1.7 -1.1 cytosine-specific methyltransferase compare
SMc02767 -1.6 -5.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc01315 -1.6 -1.2 hypothetical protein compare
SM_b20323 -1.6 -1.0 transcriptional regulator compare
SMc03051 -1.6 -2.8 flagellar biosynthesis repressor FlbT compare
SMc01206 -1.6 -0.6 queuine tRNA-ribosyltransferase compare
SM_b21580 -1.5 -1.2 hypothetical protein compare
SMc01089 -1.5 -1.1 hypothetical protein compare
SMc00334 -1.5 -0.7 cytidylate kinase compare
SMa2168 -1.5 -1.5 tRNA-Met compare
SMc02140 -1.4 -0.6 phosphate regulon transcriptional regulatory protein compare
SMa1639 -1.4 -1.5 hypothetical protein compare
SMc00427 -1.4 -1.2 peptide chain release factor RF-3 protein compare
SMc00302 -1.4 -0.8 hypothetical protein compare
SMc03826 -1.4 -0.9 argininosuccinate synthase compare
SM_b20400 -1.4 -2.6 hypothetical protein compare
SM_b20948 -1.4 -1.2 glucosyltransferase compare
SMc03091 -1.3 -3.2 arginase compare
SM_b20143 -1.3 -1.0 oligopeptide ABC transporter permease compare
SMa1073 -1.3 -1.3 TRm23b IS ATP-binding protein compare
SM_b20218 -1.3 -2.1 sensor histidine kinase compare
SMc04141 -1.3 -2.8 glutathione S-transferase compare
SMa5023 -1.3 -2.3 hypothetical protein compare
SMa0753 -1.3 -0.7 hypothetical protein compare
SMc03070 -1.3 -3.9 glucose-6-phosphate 1-dehydrogenase compare
SMc03883 -1.3 -3.6 monofunctional biosynthetic peptidoglycan transglycosylase compare
SMc00914 -1.3 -2.3 oxidoreductase compare
SM_b20616 -1.3 -1.4 thiamine biosynthesis oxidoreductase compare
SMc00344 -1.2 -1.7 hypothetical protein compare
SMa0754 -1.2 -1.5 hypothetical protein compare
SMa1697 -1.2 -1.3 hypothetical protein compare
SMc03289 -1.2 -1.3 hypothetical protein compare
SMa1323 -1.2 -1.2 Transcription regulator compare
SM_b21479 -1.2 -1.5 hypothetical protein compare
SMa1240 -1.2 -0.9 NapF ferredoxin component of periplasmic nitrate reductase compare
SMa1635 -1.2 -1.3 hypothetical protein compare
SMc02520 -1.2 -4.0 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SM_b20810 -1.2 -8.1 membrane-located cell surface saccharide acetylase compare
SMc02279 -1.2 -3.6 signal peptide protein compare
SMc02766 -1.2 -6.5 tryptophan synthase subunit beta compare
SMc00419 -1.2 -2.0 glutathione synthetase compare
SMc02683 -1.2 -1.2 hypothetical protein compare
SM_b20307 -1.2 -0.6 dihydroxyacetone kinase compare
SMc04239 -1.1 -1.7 hypothetical protein compare
SMa0760 -1.1 -1.5 FixT2 anti-kinase compare
SMc00684 -1.1 -2.2 hypothetical protein compare
SMc03069 -1.1 -1.1 6-phosphogluconolactonase compare
SM_b20050 -1.1 -2.1 hypothetical protein compare
SMc02765 -1.1 -5.5 tryptophan synthase subunit alpha compare
SMa1929 -1.1 -3.5 hypothetical protein compare
SMc00987 -1.1 -1.3 hypothetical protein compare
SMa1319 -1.1 -2.7 VirB2 type IV secretion protein compare
SMc01119 -1.1 -1.0 hypothetical protein compare
SMc05020 -1.1 -0.9 entericidin A precursor compare
SMc00494 -1.1 -1.1 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03979 -1.1 -1.0 glyceraldehyde-3-phosphate dehydrogenase compare
SMc03127 -1.0 -0.7 ABC transporter permease compare
SMa0659 -1.0 -1.0 cytochrome c binding protein, carboxyl terminus compare
SMc01653 -1.0 -1.9 ABC transporter ATP-binding protein compare
SMa0169 -1.0 -2.4 methyltransferase compare
SMc01223 -1.0 -1.6 transcriptional regulator compare
SMc02753 -1.0 -0.5 PTS system transporter subunit IIA compare
SMc02247 -1.0 -0.7 signal peptide protein compare
SMc01364 -1.0 -0.8 DNA topoisomerase I compare
SMa1589 -1.0 -3.2 hypothetical protein compare
SMc02058 -1.0 -0.9 YAJC protein compare
SMa0771 -1.0 -1.3 hypothetical protein compare
SMc01981 -1.0 -2.3 cytochrome C transmembrane protein compare
SMc00560 -1.0 -1.5 hypothetical protein compare
SMc02799 -1.0 -1.7 16S rRNA methyltransferase GidB compare
SMc00073 -1.0 -1.0 hypothetical protein compare
SMc03835 -0.9 -1.4 2'-5' RNA ligase compare
SMc02647 -0.9 -1.2 transcriptional regulator compare
SM_b20290 -0.9 -2.0 transcriptional regulator compare
SMc02906 -0.9 -0.6 hypothetical protein compare
SMa1063 -0.9 -2.2 hypothetical protein compare
SMa2167 -0.9 -3.3 hypothetical protein compare
SMc00235 -0.9 -3.0 anthranilate phosphoribosyltransferase compare
SMa0087 -0.9 -1.6 hypothetical protein compare
SMa0450 -0.9 -0.7 hypothetical protein compare
SM_b21452 -0.9 -1.9 hypothetical protein compare
SMa0776 -0.9 -1.2 TRm23b IS ATP-binding protein compare
SMa1007 -0.9 -2.3 copper protein compare
SMc00176 -0.9 -2.4 hypothetical protein compare
SMc00352 -0.9 -0.9 acetyltransferase compare
SM_b20809 -0.9 -3.1 arabinose-5-phosphate isomerase compare
SMc01553 -0.9 -1.7 acyl carrier protein compare
SMa5014 -0.9 -2.0 hypothetical protein compare
SMc02095 -0.9 -3.6 hypothetical protein compare
SM_b20897 -0.9 -1.1 hypothetical protein compare
SM_b20184 -0.9 -1.0 ABC transporter ATP-binding protein compare
SMa0267 -0.9 -2.9 GntR family transcriptional regulator compare
SMa0421 -0.9 -2.1 hypothetical protein compare
SMc00718 -0.9 -1.7 hypothetical protein compare
SMc00067 -0.9 -3.7 outer-membranne lipoprotein compare
SM_b20946 -0.9 -3.0 galactosyltransferase compare
SMc00689 -0.9 -2.3 lipoprotein compare
SMc02739 -0.9 -1.5 glycine betaine transport ATP-binding ABC transporter protein compare
SMc02169 -0.9 -1.0 ABC transporter ATP-binding protein compare
SMc04024 -0.9 -1.9 membrane-bound lytic murein transglycosylase compare
SMa0281 -0.9 -1.9 MerR family transcriptional regulator compare
SMc02838 -0.9 -2.4 phosphoglyceromutase compare
SMc02861 -0.8 -1.0 phosphate transporter compare
SMc01176 -0.8 -1.6 hypothetical protein compare
SM_b20880 -0.8 -3.1 ATP-dependent RNA helicase compare
SMa1339 -0.8 -4.1 ABC transporter permease compare
SM_b21689 -0.8 -2.0 hypothetical protein compare
SM_b20022 -0.8 -2.0 hypothetical protein compare
SMc02866 -0.8 -1.6 transcriptional regulator compare
SMc03773 -0.8 -2.2 hypothetical protein compare
SMa2323 -0.8 -2.2 hypothetical protein compare
SMc00804 -0.8 -0.9 hypothetical protein compare
SMc00691 -0.8 -1.0 site-specific tyrosine recombinase XerD compare
SMc02041 -0.8 -1.0 short chain dehydrogenase compare
SMc00580 -0.8 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMa1666 -0.8 -2.0 hypothetical protein compare
SMc00667 -0.8 -1.0 hypothetical protein compare
SMa0964 -0.8 -1.7 hypothetical protein compare
SMa1779 -0.8 -1.2 hypothetical protein compare
SMc01709 -0.8 -1.9 signal peptide protein compare
SM_b20313 -0.8 -1.8 glycerone kinase compare
SMc00470 -0.8 -1.8 hypothetical protein compare
SMc01651 -0.8 -1.2 transcriptional regulator compare
SMc02234 -0.8 -0.8 hypothetical protein compare
SMa0190 -0.8 -2.9 transcriptional regulator compare
SMa1160 -0.8 -2.3 hypothetical protein compare
SMc01097 -0.8 -1.2 hypothetical protein compare
SMa0874 -0.8 -1.6 NodN dehydratase compare
SMc02102 -0.8 -1.4 hypothetical protein compare
SMc00236 -0.8 -2.2 Indole-3-glycerol phosphate synthase compare
SM_b21471 -0.8 -2.1 hypothetical protein compare
SMc01022 -0.8 -2.8 cytochrome B transmembrane protein compare
SMc01515 -0.8 -1.9 hypothetical protein compare
SM_b21191 -0.8 -1.4 surface saccharide ABC transporter ATP-binding/membrane spanning protein compare
SMa0723 -0.8 -2.6 hypothetical protein compare
SMa1428 -0.8 -2.9 TetR/AcrR family transcriptional regulator compare
SMa1625 -0.8 -1.1 LysR family transcriptional regulator compare
SM_b20830 -0.8 -3.5 arabinose-5-phosphate isomerase compare
SM_b21511 -0.8 -0.7 plasmid stability protein compare
SMa0699 -0.8 -2.2 hypothetical protein compare
SMc03159 -0.8 -1.2 ABC transporter ATP-binding protein compare
SMa1058 -0.8 -1.0 hypothetical protein compare
SMc00241 -0.8 -0.9 transcriptional regulator compare
SMc01147 -0.8 -1.1 coproporphyrinogen III oxidase compare
SMc03899 -0.8 -0.6 hypothetical protein compare
SMa0249 -0.8 -1.0 TRAP-type small permease component compare
SM_b21072 -0.8 -2.7 hypothetical protein compare
SMc00882 -0.8 -1.9 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SMa5033 -0.8 -0.6 hypothetical protein compare
SMc00147 -0.8 -1.1 hypothetical protein compare
SMc00177 -0.7 -2.4 hypothetical protein compare
SMc02143 -0.7 -1.7 phosphate ABC transporter permease compare
SMa1427 -0.7 -2.5 ABC transporter substrate-binding protein compare
SMc01143 -0.7 -2.6 heat-inducible transcription repressor compare
SM_b21046 -0.7 -2.7 transposase of insertion sequence ISRm10-1, orfB C-terminus protein compare
SMc01120 -0.7 -1.3 hypothetical protein compare
SMc02108 -0.7 -2.3 hypothetical protein compare
SM_b21492 -0.7 -2.1 hypothetical protein compare
SMc02941 -0.7 -2.3 hypothetical protein compare
SMc03842 -0.7 -1.2 hypothetical protein compare
SMc02275 -0.7 -2.0 pyrazinamidase/nicotinamidase (Includes: pyrazinamidase, nicotinamidase) protein compare
SMc02978 -0.7 -1.5 hypothetical protein compare
SMc00450 -0.7 -0.4 protoheme IX farnesyltransferase compare
SMa2105 -0.7 -2.6 hypothetical protein compare
SMa0677 -0.7 -2.5 ABC transporter substrate-binding protein compare


Specific Phenotypes

For 2 genes in this experiment