Experiment set18IT033 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 12) - Cage1;Mouse3

200 most detrimental genes:

  gene name fitness t score description  
BT1876 +4.7 7.4 putative anti-sigma factor (NCBI ptt file) compare
BT0414 +4.7 3.3 sulfate adenylyltransferase subunit 2 (NCBI ptt file) compare
BT2853 +4.6 2.2 hypothetical protein (NCBI ptt file) compare
BT1874 +4.4 8.1 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1872 +4.1 5.2 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT2744 +3.8 15.4 acetyltransferase (NCBI ptt file) compare
BT2856 +3.2 5.4 hypothetical protein (NCBI ptt file) compare
BT3974 +2.8 8.1 conserved hypothetical protein (NCBI ptt file) compare
BT1873 +2.8 3.2 endo-arabinase (NCBI ptt file) compare
BT3133 +2.7 7.4 alpha-galactosidase (NCBI ptt file) compare
BT2760 +2.3 5.7 conserved hypothetical protein (NCBI ptt file) compare
BT1071 +2.2 4.1 hypothetical protein (NCBI ptt file) compare
BT2743 +2.2 9.6 putative aminopeptidase (NCBI ptt file) compare
BT3701 SusD +2.2 14.5 SusD, outer membrane protein (NCBI ptt file) compare
BT1877 +2.2 3.5 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1535 +2.2 6.3 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0316 +2.1 12.9 putative hemin receptor (NCBI ptt file) compare
BT1875 +2.0 6.0 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT3705 SusR +2.0 13.3 regulatory protein SusR (NCBI ptt file) compare
BT0902 +2.0 5.0 hypothetical protein (NCBI ptt file) compare
BT3703 SusB +1.9 11.3 alpha-glucosidase SusB (NCBI ptt file) compare
BT3702 SusC +1.9 13.2 SusC, outer membrane protein involved in starch binding (NCBI ptt file) compare
BT2857 +1.7 4.5 hypothetical protein (NCBI ptt file) compare
BT3832 +1.7 5.0 conserved hypothetical protein (NCBI ptt file) compare
BT4672 +1.7 4.5 hypothetical protein (NCBI ptt file) compare
BT2854 +1.7 4.7 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT4123 +1.7 11.7 exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) compare
BT3700 SusE +1.6 10.0 SusE: Outer membrane amylopectin-binding protein (from data) compare
BT0671 +1.6 2.5 outer membrane protein TolC, putative (NCBI ptt file) compare
BT4618 +1.4 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT3132 +1.4 3.9 sialic acid-specific 9-O-acetylesterase (NCBI ptt file) compare
BT2417 +1.4 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1203 +1.3 2.1 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT4693 +1.3 1.5 cation efflux system protein (NCBI ptt file) compare
BT1229 +1.2 1.9 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT2858 +1.2 4.7 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT4671 +1.1 8.5 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1804 +1.1 2.9 electron transfer flavoprotein beta-subunit (NCBI ptt file) compare
BT1021 +1.1 3.8 arabinosidase (NCBI ptt file) compare
BT1058 +1.1 7.0 two-component system sensor histidine kinase (NCBI ptt file) compare
BT2946 +1.1 1.5 putative glycosyltransferase (NCBI ptt file) compare
BT4673 +1.1 7.9 two-component system sensor histidine kinase (NCBI ptt file) compare
BT4544 +1.1 2.1 transposase (NCBI ptt file) compare
BT1505 +1.1 2.9 hypothetical protein (NCBI ptt file) compare
BT3197 +1.1 1.7 hypothetical protein (NCBI ptt file) compare
BT4746 +1.1 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT4363 +1.1 1.5 putative alkaline phosphatase (NCBI ptt file) compare
BT3481 +1.1 1.7 putative glutaminase A (NCBI ptt file) compare
BT3690 +1.1 2.9 putative membrane protein (NCBI ptt file) compare
BT1059 +1.1 4.5 putative UDP-glucose 4-epimerase (NCBI ptt file) compare
BT2315 +1.0 2.5 hypothetical protein (NCBI ptt file) compare
BT3355 +1.0 0.5 putative auxin-regulated protein (NCBI ptt file) compare
BT1313 +1.0 3.4 muconate cycloisomerase (NCBI ptt file) compare
BT0337 +1.0 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0758 +1.0 1.9 acetyltransferase (NCBI ptt file) compare
BT0188 +1.0 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0749 +1.0 5.1 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT0635 +1.0 2.2 putative transcriptional regulator (NCBI ptt file) compare
BT2852 +1.0 3.3 putative beta-xylosidase (NCBI ptt file) compare
BT1200 +1.0 2.4 hypothetical protein (NCBI ptt file) compare
BT1719 +1.0 1.9 sulfopyruvate decarboxylase subunit beta (NCBI ptt file) compare
BT0443 +1.0 1.7 thermostable beta-glucosidase B (NCBI ptt file) compare
BT3270 +1.0 4.8 putative anti-sigma factor (NCBI ptt file) compare
BT0220 +1.0 1.2 hypothetical protein (NCBI ptt file) compare
BT4250 +1.0 5.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0288 +1.0 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1329 +0.9 2.4 putative thiol peroxidase (NCBI ptt file) compare
BT1806 +0.9 4.5 acyl-CoA dehydrogenase (NCBI ptt file) compare
BT4490 +0.9 2.4 hypothetical protein (NCBI ptt file) compare
BT1256 +0.9 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT0560 +0.9 2.8 outer membrane efflux protein (NCBI ptt file) compare
BT3691 +0.9 1.8 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0080 +0.9 2.5 hypothetical protein (NCBI ptt file) compare
BT2651 +0.9 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT3906 +0.9 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT2281 +0.9 2.5 hypothetical protein (NCBI ptt file) compare
BT2389 +0.9 1.8 putative transport protein (NCBI ptt file) compare
BT0074 +0.9 2.1 hypothetical protein (NCBI ptt file) compare
BT0912 +0.9 1.9 DNA-binding protein HU (NCBI ptt file) compare
BT1422 +0.9 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT4360 +0.9 4.0 hypothetical protein (NCBI ptt file) compare
BT0848 +0.9 2.0 hypothetical protein (NCBI ptt file) compare
BT4762 +0.9 1.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2010 +0.9 1.9 hypothetical protein (NCBI ptt file) compare
BT2684 +0.9 1.4 hypothetical protein (NCBI ptt file) compare
BT0803 +0.9 2.9 integral membrane efflux pump, putative multidrug-efflux transporter (NCBI ptt file) compare
BT4504 +0.9 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT2295 +0.9 3.0 hypothetical protein (NCBI ptt file) compare
BT4361 +0.9 3.8 hypothetical protein (NCBI ptt file) compare
BT1258 +0.9 2.4 putative acetyltransferase (NCBI ptt file) compare
BT0084 +0.9 2.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1905 +0.9 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT0215 +0.9 1.0 iron uptake regulatory protein (NCBI ptt file) compare
BT4670 +0.8 4.9 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1532 +0.8 3.8 ABC transporter permease (NCBI ptt file) compare
BT1111 +0.8 3.3 hypothetical protein (NCBI ptt file) compare
BT0796 +0.8 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT3899 +0.8 4.4 transcriptional regulator (NCBI ptt file) compare
BT3045 +0.8 6.6 hypothetical protein (NCBI ptt file) compare
BT4046 +0.8 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT2855 +0.8 4.5 beta-mannosidase precursor (NCBI ptt file) compare
BT0654 +0.8 3.9 two-component sensor histidine kinase (NCBI ptt file) compare
BT2116 +0.8 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT0517 +0.8 2.3 flavodoxin (NCBI ptt file) compare
BT1183 +0.8 5.4 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) compare
BT0462 +0.8 2.0 putative transcriptional regulator (NCBI ptt file) compare
BT1588 +0.8 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT0055 +0.8 2.5 putative glycosyltransferase (NCBI ptt file) compare
BT1072 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT3080 +0.8 3.4 cysteine synthase A (NCBI ptt file) compare
BT4753 +0.8 1.2 hypothetical protein (NCBI ptt file) compare
BT1933 +0.8 1.7 transposase (NCBI ptt file) compare
BT1207 +0.8 2.7 glycerate dehydrogenase (NADH-dependent) (NCBI ptt file) compare
BT0924 +0.8 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0294 +0.8 3.6 hypothetical protein (NCBI ptt file) compare
BT0195 +0.8 1.5 glycerophosphoryl diester phosphodiesterase (NCBI ptt file) compare
BT0607 +0.8 2.2 serine O-acetyltransferase (NCBI ptt file) compare
BT3618 +0.8 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT2423 +0.8 3.7 K+-transporting ATPase C chain (NCBI ptt file) compare
BT4332 +0.8 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1464 +0.8 2.2 putative acetyltransferase, (GNAT) family (NCBI ptt file) compare
BT3457 +0.8 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0584 +0.8 2.1 putative outer membrane protein (NCBI ptt file) compare
BT1542 +0.8 4.1 putative pyridine nucleotide-disulfide oxidoreductase (NCBI ptt file) compare
BT1546 +0.8 2.8 acyltransferase (NCBI ptt file) compare
BT1534 +0.7 1.9 hypothetical protein (NCBI ptt file) compare
BT0925 +0.7 1.9 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT3286 +0.7 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1185 +0.7 6.2 OmpA-related protein (NCBI ptt file) compare
BT1149 +0.7 2.5 Type II restriction enzyme HpaII (NCBI ptt file) compare
BT3772 +0.7 2.0 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT1576 +0.7 1.2 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT1533 +0.7 4.1 conserved hypothetical protein (NCBI ptt file) compare
BT0646 +0.7 2.8 hypothetical protein (NCBI ptt file) compare
BT2625 +0.7 5.5 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1371 +0.7 3.3 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) compare
BT3736 +0.7 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3047 +0.7 5.1 hypothetical protein (NCBI ptt file) compare
BT3370 +0.7 2.1 putative glycosyltransferase yibD (NCBI ptt file) compare
BT0911 +0.7 3.6 putative integration host factor IHF alpha subunit (NCBI ptt file) compare
BT1188 +0.7 1.7 putative transcription regulator (NCBI ptt file) compare
BT1519 +0.7 1.9 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1106 +0.7 2.5 fructose-bisphosphate aldolase class I (NCBI ptt file) compare
BT3915 +0.7 1.2 hypothetical protein (NCBI ptt file) compare
BT0312 +0.7 3.8 2-oxoisovalerate dehydrogenase beta subunit (NCBI ptt file) compare
BT0034 +0.7 3.3 hypothetical protein (NCBI ptt file) compare
BT4668 +0.7 1.4 arabinogalactan endo-1,4-beta-galactosidase (NCBI ptt file) compare
BT1238 +0.7 2.5 putative RNA binding protein with S1 RNA-binding domain (NCBI ptt file) compare
BT2110 +0.7 3.7 hypothetical protein (NCBI ptt file) compare
BT0135 +0.7 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3251 +0.7 4.6 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT0417 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT3918 +0.7 2.1 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT3806 +0.7 0.4 conserved hypothetical protein (NCBI ptt file) compare
BT3387 +0.7 0.9 putative polysaccharide deacetylase (NCBI ptt file) compare
BT4165 +0.7 1.6 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT3046 +0.7 5.4 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT4038 +0.7 3.7 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0383 +0.7 2.4 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT0344 +0.7 2.1 hypothetical protein (NCBI ptt file) compare
BT2361 +0.7 2.9 hypothetical protein (NCBI ptt file) compare
BT2171 +0.7 3.7 putative anti-sigma factor (NCBI ptt file) compare
BT0757 +0.7 2.9 beta-galactosidase (NCBI ptt file) compare
BT1895 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT1299 +0.7 2.1 V-type ATP synthase subunit A (NCBI ptt file) compare
BT1544 +0.7 2.6 NADH pyrophosphatase, MutT family hydrolase (NCBI ptt file) compare
BT1015 +0.7 2.3 putative oxidoreductase (NCBI ptt file) compare
BT0315 +0.7 2.2 hypothetical protein (NCBI ptt file) compare
BT0291 +0.7 2.4 integrase (NCBI ptt file) compare
BT2546 +0.6 3.0 transcriptional regulator (NCBI ptt file) compare
BT4422 +0.6 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0086 +0.6 1.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0766 +0.6 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3738 +0.6 5.3 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) compare
BT3049 +0.6 5.4 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) compare
BT3901 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT0939 +0.6 2.2 hypothetical protein (NCBI ptt file) compare
BT3859 +0.6 2.3 hypothetical protein (NCBI ptt file) compare
BT1455 +0.6 1.7 protein rtcB (NCBI ptt file) compare
BT1398 +0.6 3.3 putative aminotransferase B (NCBI ptt file) compare
BT2095 +0.6 3.2 putative surface layer protein (NCBI ptt file) compare
BT0926 +0.6 2.6 ABC-type transport, permease protein (NCBI ptt file) compare
BT1097 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT2593 +0.6 2.6 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0037 +0.6 3.4 putative transcriptional regulatory protein (NCBI ptt file) compare
BT0609 +0.6 2.2 glycosyltransferase (NCBI ptt file) compare
BT2122 +0.6 0.8 lysyl-tRNA synthetase (NCBI ptt file) compare
BT4447 +0.6 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1282 +0.6 2.2 hypothetical protein (NCBI ptt file) compare
BT2318 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT3911 +0.6 1.8 malate dehydrogenase (NCBI ptt file) compare
BT0591 +0.6 2.4 hypothetical protein (NCBI ptt file) compare
BT2555 +0.6 2.5 hypothetical protein (NCBI ptt file) compare
BT1262 +0.6 0.9 putative transcriptional regulator (NCBI ptt file) compare
BT4326 +0.6 1.6 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0729 +0.6 1.6 transcriptional regulator (NCBI ptt file) compare
BT4773 +0.6 1.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1392 +0.6 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0651 +0.6 1.1 thiamine biosynthesis protein ThiG (NCBI ptt file) compare
BT4249 +0.6 1.0 hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

For 3 genes in this experiment