Experiment set18IT031 for Sinorhizobium meliloti 1021

Compare to:

R2A control for volatile experiments

200 most important genes:

  gene name fitness t score description  
SMc02052 -4.3 -1.3 hypothetical protein compare
SMa0144 -3.5 -1.0 hypothetical protein compare
SMc03967 -3.0 -1.5 Holliday junction resolvase compare
SMc01845 -2.7 -1.3 transglycosylase transmembrane protein compare
SMa2253 -2.3 -1.9 hypothetical protein compare
SMa0734 -2.2 -2.2 hypothetical protein compare
SMc00802 -2.1 -1.2 hypothetical protein compare
SMc01364 -2.1 -1.5 DNA topoisomerase I compare
SMc00492 -1.9 -0.8 hypothetical protein compare
SM_b20021 -1.7 -1.0 transcriptional regulator compare
SMc00334 -1.7 -0.8 cytidylate kinase compare
SMc05009 -1.6 -2.0 nodulation protein NolR compare
SMc01505 -1.6 -1.4 hypothetical protein compare
SMc02373 -1.6 -1.3 hypothetical protein compare
SMa1770 -1.6 -1.2 hypothetical protein compare
SMc01880 -1.5 -2.0 pantoate--beta-alanine ligase compare
SMc04327 -1.4 -1.2 hypothetical protein compare
SMc00012 -1.4 -1.0 cytochrome C oxidase assembly protein compare
SMc01183 -1.4 -0.8 LexA repressor compare
SMc03100 -1.4 -1.1 hypothetical protein compare
SMc03763 -1.4 -1.6 cytosine-specific methyltransferase compare
SMc03878 -1.4 -2.0 acetoacetyl-CoA reductase compare
SMc00295 -1.4 -1.0 hypothetical protein compare
SMc01207 -1.4 -1.5 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SM_b20294 -1.4 -1.2 transcriptional regulator NanR compare
SM_b20810 -1.3 -10.6 membrane-located cell surface saccharide acetylase compare
SMc00419 -1.3 -2.3 glutathione synthetase compare
SMc02906 -1.3 -0.8 hypothetical protein compare
SMc02767 -1.3 -4.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc01427 -1.3 -1.3 hypothetical protein compare
SMc02833 -1.3 -1.3 penicillin-insensitive murein endopeptidase compare
SMc03826 -1.3 -1.2 argininosuccinate synthase compare
SMc02755 -1.3 -4.1 S-adenosyl-L-homocysteine hydrolase compare
SMc01242 -1.2 -1.3 signal peptide protein compare
SMc02867 -1.2 -1.9 multidrug-efflux system transmembrane protein compare
SMa2349 -1.2 -2.3 xanthine dehydrogenase iron-sulfur-binding subunit compare
SMc02799 -1.2 -2.4 16S rRNA methyltransferase GidB compare
SMc02765 -1.2 -6.2 tryptophan synthase subunit alpha compare
SM_b20880 -1.2 -4.5 ATP-dependent RNA helicase compare
SMc02495 -1.2 -1.0 translaldolase compare
SMc01337 -1.2 -1.2 hypothetical protein compare
SMc02866 -1.2 -2.5 transcriptional regulator compare
SMc00235 -1.2 -4.1 anthranilate phosphoribosyltransferase compare
SMc02435 -1.2 -1.4 methyltransferase compare
SMc03890 -1.2 -3.5 transcriptional regulator compare
SMa0126 -1.2 -1.3 CspA8 Cold shock family protein compare
SMc02766 -1.2 -6.6 tryptophan synthase subunit beta compare
SMc00013 -1.1 -1.2 cytochrome C oxidase subunit III transmembrane protein compare
SMc01765 -1.1 -1.1 hypothetical protein compare
SMc00166 -1.1 -1.2 oxidoreductase NAD protein compare
SMa1765 -1.1 -0.9 hypothetical protein compare
SMa1063 -1.1 -2.6 hypothetical protein compare
SMa0543 -1.1 -1.4 hypothetical protein compare
SMc00959 -1.1 -1.5 hypothetical protein compare
SMc04428 -1.1 -2.6 hypothetical protein compare
SM_b20075 -1.0 -1.4 hypothetical protein compare
SMa0333 -1.0 -2.0 hypothetical protein compare
SMc00760 -1.0 -2.1 recombinase A compare
SMc01222 -1.0 -4.0 lipopolysaccharide core biosynthesis glycosyl transferase compare
SM_b20413 -1.0 -0.8 hypothetical protein compare
SMc00010 -1.0 -0.9 cytochrome C oxidase polypeptide I transmembrane protein compare
SMa0740 -1.0 -1.4 hypothetical protein compare
SM_b22001 -0.9 -1.3 hypothetical protein compare
SMc03839 -0.9 -1.2 hypothetical protein compare
SM_b21479 -0.9 -1.5 hypothetical protein compare
SMc02510 -0.9 -0.4 ferric uptake regulation protein compare
SMc04259 -0.9 -2.9 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMc02520 -0.9 -3.5 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc02739 -0.9 -1.7 glycine betaine transport ATP-binding ABC transporter protein compare
SMa1635 -0.9 -1.3 hypothetical protein compare
SMc01471 -0.9 -1.4 cytochrome C oxidase assembly factor transmembrane protein compare
SMc02897 -0.9 -1.0 cytochrome C transmembrane protein compare
SMc05011 -0.9 -2.1 bacteriophage DNA-binding transcription regulator compare
SMc00821 -0.9 -1.1 hypothetical protein compare
SMc00175 -0.9 -2.9 ABC transporter ATP-binding protein compare
SM_b21591 -0.9 -1.2 GntR family transcriptional regulator compare
SMc00236 -0.9 -2.9 Indole-3-glycerol phosphate synthase compare
SMc00229 -0.9 -3.0 hypothetical protein compare
SMc04357 -0.9 -2.5 hypothetical protein compare
SMc00489 -0.9 -2.7 hypothetical protein compare
SMc01559 -0.9 -2.7 hypothetical protein compare
SMc03091 -0.9 -3.2 arginase compare
SMc01091 -0.9 -1.4 hypothetical protein compare
SMc02238 -0.9 -1.2 hypothetical protein compare
SMc02121 -0.9 -1.0 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc02144 -0.8 -1.3 phosphate ABC transporter permease compare
SMc00665 -0.8 -1.2 hypothetical protein compare
SMc01877 -0.8 -1.7 DNA repair protein compare
SMc02658 -0.8 -1.1 hypothetical protein compare
SMa1697 -0.8 -1.5 hypothetical protein compare
SMc04383 -0.8 -2.2 putative hydrolase, required for lysine catabolism (from data) compare
SMc02279 -0.8 -2.1 signal peptide protein compare
SMc02328 -0.8 -2.5 hypothetical protein compare
SMc03050 -0.8 -1.5 flagellar biosynthesis regulatory protein FlaF compare
SMa1666 -0.8 -2.0 hypothetical protein compare
SMc02312 -0.8 -2.5 zinc-binding protein compare
SMc00588 -0.8 -1.3 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc03834 -0.8 -0.9 pterin-4-alpha-carbinolamine dehydratase compare
SMa0869 -0.8 -2.7 acyltransferase compare
SMa0753 -0.8 -0.6 hypothetical protein compare
SMc02695 -0.8 -2.7 GTP-dependent nucleic acid-binding protein EngD compare
SMc01577 -0.8 -1.3 hypothetical protein compare
SMa0775 -0.8 -3.7 hypothetical protein compare
SMa0520 -0.8 -3.2 RpiR family transcriptional regulator compare
SMc00854 -0.8 -1.2 hypothetical protein compare
SMc01842 -0.8 -1.3 methyltransferase transcription regulator protein compare
SMc03062 -0.8 -1.4 ABC transporter for D-maltose/D-trehalose/sucrose, permease component 1 (AglF) (from data) compare
SMc00053 -0.8 -0.4 monovalent cation/H+ antiporter subunit C compare
SMc00085 -0.8 -1.9 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SM_b20098 -0.8 -1.9 hypothetical protein compare
SMa0085 -0.7 -2.1 dehydrogenase compare
SMc04385 -0.7 -2.7 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc01041 -0.7 -1.6 NIFR3-like protein compare
SMc00914 -0.7 -1.8 oxidoreductase compare
SMc04220 -0.7 -0.7 transcriptional regulator compare
SMc04024 -0.7 -2.5 membrane-bound lytic murein transglycosylase compare
SMc01093 -0.7 -1.9 esterase compare
SMc00177 -0.7 -3.4 hypothetical protein compare
SMc00804 -0.7 -1.2 hypothetical protein compare
SMc02138 -0.7 -3.0 acetylornithine transaminase compare
SMc01852 -0.7 -3.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SM_b20758 -0.7 -0.9 ArsR family transcriptional regulator compare
SMc00427 -0.7 -0.9 peptide chain release factor RF-3 protein compare
SM_b20946 -0.7 -2.3 galactosyltransferase compare
SMc01441 -0.7 -2.3 membrane bound protease compare
SMa1008 -0.7 -2.3 hypothetical protein compare
SMa0663 -0.7 -2.0 hypothetical protein compare
SMc03883 -0.7 -2.4 monofunctional biosynthetic peptidoglycan transglycosylase compare
SMc00800 -0.7 -0.9 hypothetical protein compare
SMc03837 -0.7 -1.3 ABC transporter ATP-binding protein compare
SM_b20708 -0.7 -3.5 methylated-DNA--protein-cysteine methyltransferase compare
SM_b21480 -0.7 -0.6 hypothetical protein compare
SMc01774 -0.7 -2.4 hypothetical protein compare
SMc00400 -0.7 -1.9 signal peptide protein compare
SM_b21046 -0.7 -3.4 transposase of insertion sequence ISRm10-1, orfB C-terminus protein compare
SMa0421 -0.7 -2.0 hypothetical protein compare
SMc04052 -0.7 -0.7 transcriptional regulator compare
SMc04315 -0.7 -3.6 transcriptional regulator compare
SMa0160 -0.7 -3.4 GntR family transcriptional regulator compare
SM_b20026 -0.7 -0.7 hypothetical protein compare
SM_b20809 -0.7 -3.1 arabinose-5-phosphate isomerase compare
SM_b20752 -0.7 -2.9 3-hydroxyisobutyryl-CoA hydrolase compare
SMc02140 -0.7 -0.4 phosphate regulon transcriptional regulatory protein compare
SMc02978 -0.7 -1.3 hypothetical protein compare
SMa1921 -0.7 -1.0 hypothetical protein compare
SMc00455 -0.7 -2.6 hypothetical protein compare
SMc04460 -0.7 -4.7 glycogen phosphorylase compare
SMc02858 -0.7 -0.3 chaperone protein DnaJ compare
SMc02901 -0.7 -0.5 hypothetical protein compare
SMc03013 -0.7 -1.8 hypothetical protein compare
SMa0771 -0.7 -1.1 hypothetical protein compare
SMc00280 -0.7 -1.2 hypothetical protein compare
SMc03999 -0.7 -0.7 hypothetical protein compare
SMc00880 -0.7 -1.9 oxidoreductase compare
SM_b20184 -0.7 -1.4 ABC transporter ATP-binding protein compare
SMc00703 -0.7 -1.7 hypothetical protein compare
SMa0861 -0.6 -2.3 transposase, fragment compare
SMc03800 -0.6 -1.6 hypothetical protein compare
SMa1318 -0.6 -2.4 VirB3 type IV secretion protein compare
SMc01330 -0.6 -1.7 transcriptional regulator compare
SMc02561 -0.6 -1.1 hypothetical protein compare
SMa1686 -0.6 -1.7 Two-component response regulator compare
SMc01347 -0.6 -1.5 hypothetical protein compare
SMc00948 -0.6 -3.5 glutamine synthetase compare
SMc03924 -0.6 -3.2 glycogen synthase compare
SMa1702 -0.6 -2.9 hypothetical protein compare
SMc02894 -0.6 -1.2 hypothetical protein compare
SMc01370 -0.6 -1.0 response regulator PleD compare
SMa0341 -0.6 -1.4 hypothetical protein compare
SMc02647 -0.6 -1.1 transcriptional regulator compare
SMc00089 -0.6 -2.2 hypothetical protein compare
SMa0431 -0.6 -0.8 hypothetical protein compare
SMa0083 -0.6 -2.4 ABC transporter ATP-binding protein compare
SMa0572 -0.6 -2.4 hypothetical protein compare
SMa1688 -0.6 -2.6 Two-component response regulator compare
SM_b20616 -0.6 -1.3 thiamine biosynthesis oxidoreductase compare
SM_b22005 -0.6 -0.8 hypothetical protein compare
SMa1595 -0.6 -2.0 hypothetical protein compare
SMc03253 -0.6 -2.8 L-proline 3-hydroxylase compare
SMc01521 -0.6 -2.9 nitrogen regulatory protein compare
SMa2034 -0.6 -0.9 hypothetical protein compare
SMc01942 -0.6 -2.2 urease accessory protein compare
SM_b20355 -0.6 -1.9 hypothetical protein compare
SMc00048 -0.6 -2.0 hypothetical protein compare
SMc00176 -0.6 -2.5 hypothetical protein compare
SMc01836 -0.6 -1.8 hypothetical protein compare
SMc02142 -0.6 -1.2 phosphate transporter ATP-binding protein compare
SMa0677 -0.6 -3.2 ABC transporter substrate-binding protein compare
SMa0846 -0.6 -0.6 transposase, fragment compare
SM_b20270 -0.6 -1.2 proline racemase compare
SMc03935 -0.6 -3.8 hypothetical protein compare
SMc03748 -0.6 -1.6 hypothetical protein compare
SMc00296 -0.6 -3.5 POLY3-hydroxybutyrate polymerase compare
SMa0267 -0.6 -2.9 GntR family transcriptional regulator compare
SMc00982 -0.6 -1.9 dioxygenase compare
SMc01089 -0.6 -0.7 hypothetical protein compare
SMa1625 -0.6 -0.6 LysR family transcriptional regulator compare
SMa0620 -0.6 -2.6 hypothetical protein compare
SM_b21159 -0.6 -1.1 short-chain dehydrogenase compare
SMa2263 -0.6 -1.3 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment