Experiment set18IT026 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 8) - Cage4;Mouse4

200 most important genes:

  gene name fitness t score description  
BT1607 -5.6 -3.8 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT3933 -5.1 -6.0 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT0892 -5.0 -3.2 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT1757 -4.9 -4.8 fructokinase (NCBI ptt file) compare
BT1843 -4.9 -3.4 adenylosuccinate synthetase (NCBI ptt file) compare
p5482_02 -4.6 -4.4 hypothetical protein (NCBI) compare
BT1374 -4.4 -3.0 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT3821 -4.4 -11.3 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) compare
BT2396 -4.3 -4.2 putative membrane transporter involved in nicotinamide mononucleotide transport (NCBI ptt file) compare
BT1758 -4.2 -2.9 fructose transporter (from data) compare
BT3320 -4.2 -5.0 dihydrodipicolinate reductase (NCBI ptt file) compare
BT3733 -4.1 -11.2 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT3253 -4.0 -2.8 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT0555 -3.9 -4.7 amidophosphoribosyltransferase (NCBI ptt file) compare
BT4644 -3.9 -2.7 putative anti-sigma factor (NCBI ptt file) compare
BT0155 -3.9 -2.7 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) compare
BT_2008 -3.9 -2.5 hypothetical protein (RefSeq) compare
BT3688 -3.8 -9.4 putative acetyltransferase (NCBI ptt file) compare
BT4265 -3.8 -2.6 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT0700 -3.7 -2.6 GTP pyrophosphokinase (NCBI ptt file) compare
BT0180 -3.6 -8.4 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) compare
BT1375 -3.6 -2.5 aspartokinase (NCBI ptt file) compare
BT3260 -3.5 -2.4 DNA polymerase I (NCBI ptt file) compare
BT4211 -3.5 -2.4 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT0557 -3.5 -7.8 carbamyl phosphate synthetase (NCBI ptt file) compare
BT0156 -3.5 -2.4 transcriptional regulator (NCBI ptt file) compare
BT1733 -3.5 -2.4 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT1746 -3.5 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT4599 -3.5 -6.2 putative transcriptional regulator (NCBI ptt file) compare
BT0891 -3.4 -2.3 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT1270 -3.4 -5.7 putative Na+/H+ antiporter (NCBI ptt file) compare
BT0876 -3.4 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT3935 -3.4 -4.0 aminotransferase (NCBI ptt file) compare
BT0146 -3.4 -8.1 unsaturated glucuronyl hydrolase (NCBI ptt file) compare
BT1747 -3.3 -2.3 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT2403 -3.2 -13.4 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT0527 -3.2 -4.9 tryptophan synthase alpha chain (NCBI ptt file) compare
BT3936 -3.2 -2.2 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT0249 -3.2 -2.2 5-methyltetrahydrofolate--homocysteine methyltransferase or methionine synthase (NCBI ptt file) compare
BT2167 -3.2 -12.4 elongation factor G (NCBI ptt file) compare
BT0547 -3.1 -5.5 aspartate aminotransferase (NCBI ptt file) compare
BT3712 -3.1 -4.6 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT0771 -3.1 -2.1 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT1857 -3.0 -8.8 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT1355 -3.0 -6.1 hypothetical protein (NCBI ptt file) compare
BT4610 -3.0 -2.8 RecA (NCBI ptt file) compare
BT0351 -2.9 -4.8 L-arabinose isomerase (NCBI ptt file) compare
BT2742 -2.9 -1.5 integrase, site-specific recombinase (NCBI ptt file) compare
BT1346 -2.9 -4.0 capsule biosynthesis protein capA (NCBI ptt file) compare
BT0370 -2.9 -4.8 galactokinase (NCBI ptt file) compare
BT2437 -2.9 -8.9 hypothetical protein (NCBI ptt file) compare
BT2944 -2.9 -5.5 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT0556 -2.8 -1.9 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT1339 -2.8 -5.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file) compare
BT0350 -2.8 -5.0 ribulokinase (EC 2.7.1.16) (from data) compare
BT4191 -2.8 -6.2 hypothetical protein (NCBI ptt file) compare
BT4049 -2.8 -5.5 putative ArgK protein with ATPase and kinase domains (NCBI ptt file) compare
BT3268 -2.8 -1.9 glucose-inhibited division protein A (NCBI ptt file) compare
BT1222 -2.8 -1.9 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT0548 -2.8 -2.6 diaminopimelate epimerase (NCBI ptt file) compare
BT2386 -2.7 -6.7 AsnC family transcriptional regulator (NCBI ptt file) compare
BT0728 -2.7 -3.7 transcriptional regulator (NCBI ptt file) compare
BT1759 -2.7 -4.5 levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file) compare
BT1859 -2.7 -5.4 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT4551 -2.7 -1.8 putative GTPase, ThdF family (NCBI ptt file) compare
BT4720 -2.7 -3.2 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1347 -2.7 -3.6 conserved hypothetical protein (NCBI ptt file) compare
BT1343 -2.7 -1.8 putative capsule biosynthesis protein (NCBI ptt file) compare
BT3072 -2.7 -5.6 collagenase precursor (NCBI ptt file) compare
BT1340 -2.7 -4.0 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT1954 -2.6 -5.5 putative surface layer protein (NCBI ptt file) compare
BT4322 -2.6 -1.8 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT2418 -2.6 -3.9 hypothetical protein (NCBI ptt file) compare
BT2438 -2.6 -9.0 hypothetical protein (NCBI ptt file) compare
BT1356 -2.5 -3.4 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT3717 -2.5 -6.4 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT1082 -2.5 -13.1 Na+/solute symporter (NCBI ptt file) compare
BT0241 -2.5 -1.7 hypothetical protein (NCBI ptt file) compare
BT0352 -2.5 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1352 -2.5 -4.7 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT1530 -2.5 -4.1 putative outer membrane protein OprM precursor (NCBI ptt file) compare
BT0353 -2.5 -5.9 putative sugar epimerase/aldolase (NCBI ptt file) compare
BT1358 -2.5 -3.3 putative transcriptional regulator (NCBI ptt file) compare
BT2397 -2.4 -3.9 conserved hypothetical protein (NCBI ptt file) compare
BT4658 -2.4 -4.0 glucuronyl hydrolase (NCBI ptt file) compare
BT1957 -2.4 -10.3 hypothetical protein (NCBI ptt file) compare
BT2938 -2.4 -2.3 putative glycosyltransferase (NCBI ptt file) compare
BT1354 -2.4 -4.8 putative flippase (NCBI ptt file) compare
BT4667 -2.4 -9.0 beta-galactosidase (NCBI ptt file) compare
BT0544 -2.3 -4.1 ammonium transporter (NCBI ptt file) compare
BT2843 -2.3 -2.7 integrase (NCBI ptt file) compare
BT1955 -2.3 -9.8 putative cell wall biogenesis protein (NCBI ptt file) compare
BT1342 -2.3 -4.2 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT1536 -2.3 -5.3 ABC transporter permease (NCBI ptt file) compare
BT4572 -2.3 -7.1 enolase (NCBI ptt file) compare
BT2387 -2.3 -10.2 O-acetylhomoserine (thiol)-lyase (NCBI ptt file) compare
BT1341 -2.3 -4.8 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT3819 -2.3 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT2798 -2.3 -13.4 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT3220 -2.3 -9.2 TPR-repeat-containing protein (NCBI ptt file) compare
BT2413 -2.2 -9.4 homoserine O-succinyltransferase (NCBI ptt file) compare
BT2945 -2.2 -8.5 UDP-N-acetyl-D-mannosamine dehydrogenase (NCBI ptt file) compare
BT3894 -2.2 -5.1 putative methyltransferase (NCBI ptt file) compare
BT4174 -2.2 -6.8 conserved hypothetical protein (NCBI ptt file) compare
BT1953 -2.2 -7.4 putative TonB-linked outer membrane receptor (NCBI ptt file) compare
BT3758 -2.2 -3.5 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT1345 -2.2 -3.3 glycosyltransferase (NCBI ptt file) compare
BT0578 -2.2 -5.9 excinuclease ABC subunit A (NCBI ptt file) compare
BT1221 -2.2 -2.9 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT0973 -2.2 -3.6 hypothetical protein (NCBI ptt file) compare
BT3395 -2.2 -7.7 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT4300 -2.1 -2.9 transcription regulator, CRP family (NCBI ptt file) compare
BT1348 -2.1 -3.2 CDP-abequose synthase (NCBI ptt file) compare
BT2841 -2.1 -2.3 pyruvate kinase (NCBI ptt file) compare
BT0730 -2.1 -3.4 putative mRNA-binding protein (NCBI ptt file) compare
BT2146 -2.1 -11.1 4-alpha-glucanotransferase (NCBI ptt file) compare
BT1220 -2.1 -2.4 6-phosphogluconolactonase (NCBI ptt file) compare
BT3195 -2.1 -4.8 conserved hypothetical protein (NCBI ptt file) compare
BT0177 -2.1 -3.8 hypothetical protein (NCBI ptt file) compare
BT3981 -2.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT4255 -2.0 -3.8 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) compare
BT3337 -2.0 -9.2 RND efflux system for fusidic acid, chlorpromazine, and thioridazine, outer membrane component (from data) compare
BT2415 -2.0 -10.0 aspartate aminotransferase (NCBI ptt file) compare
BT3223 -2.0 -4.1 hypothetical protein (NCBI ptt file) compare
BT1439 -2.0 -8.6 Outer membrane binding protein for vancomycin (SusD-like) (from data) compare
BT1752 -2.0 -1.3 hypothetical protein (NCBI ptt file) compare
BT1444 -2.0 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1956 -2.0 -6.4 putative cell surface protein (NCBI ptt file) compare
BT3043 -1.9 -11.8 putative xylanase (NCBI ptt file) compare
BT0355 -1.9 -5.8 L-arabinose/L-arabinobiose symporter (from data) compare
BT2062 -1.9 -8.7 6-phosphofructokinase (NCBI ptt file) compare
BT1344 -1.9 -5.5 putative glycosyltransferase (NCBI ptt file) compare
BT2185 -1.9 -4.4 hypothetical protein (NCBI ptt file) compare
BT3759 -1.9 -7.7 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT1068 -1.9 -2.3 hypothetical protein (NCBI ptt file) compare
BT1153 -1.9 -6.8 phosphoserine aminotransferase (NCBI ptt file) compare
BT1476 -1.8 -4.4 aspartate aminotransferase (NCBI ptt file) compare
BT1351 -1.8 -2.1 glucose-1-phosphate cytidylyltransferase (NCBI ptt file) compare
BT1350 -1.8 -4.5 CDP-glucose 4,6-dehydratase (NCBI ptt file) compare
BT1363 -1.8 -1.7 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT0411 -1.8 -3.9 CysQ, sulfite synthesis pathway protein (NCBI ptt file) compare
BT0258 -1.8 -8.9 glucosamine-6-phosphate isomerase (NCBI ptt file) compare
BT1739 -1.8 -10.3 excinuclease ABC subunit A (NCBI ptt file) compare
BT1860 -1.8 -4.8 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT4041 -1.8 -4.5 conserved hypothetical protein (NCBI ptt file) compare
BT0529 -1.8 -3.6 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT0618 -1.8 -1.7 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfC (NCBI ptt file) compare
BT2977 -1.7 -9.4 peptidylprolyl isomerase (NCBI ptt file) compare
BT4339 -1.7 -4.0 glutamine synthetase (NCBI ptt file) compare
BT0875 -1.7 -4.3 beta-ureidopropionase (NCBI ptt file) compare
BT0519 -1.7 -4.7 hypothetical protein (NCBI ptt file) compare
BT1320 -1.7 -5.6 putative transcriptional regulator, phosphate uptake regulation (NCBI ptt file) compare
BT0416 -1.7 -5.7 conserved hypothetical protein (NCBI ptt file) compare
BT3729 -1.7 -3.6 putative protoporphyrinogen oxidase (NCBI ptt file) compare
BT1081 -1.7 -2.1 recombination protein recR (NCBI ptt file) compare
BT2049 -1.7 -2.7 transcriptional regulator (NCBI ptt file) compare
BT3655 -1.7 -6.9 arabinosidase (NCBI ptt file) compare
BT4764 -1.7 -1.8 hypothetical protein (NCBI ptt file) compare
BT2091 -1.6 -6.9 methylmalonyl-CoA mutase small subunit (NCBI ptt file) compare
BT3549 -1.6 -6.2 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT0811 -1.6 -4.6 putative tRNA/rRNA methyltransferase (NCBI ptt file) compare
BT1152 -1.6 -4.1 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT2090 -1.6 -7.4 methylmalonyl-CoA mutase large subunit (NCBI ptt file) compare
BT4778 -1.6 -2.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4239 -1.6 -6.6 hypothetical protein (NCBI ptt file) compare
BT3550 -1.5 -3.8 putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) compare
BT0356 -1.5 -2.8 aldose 1-epimerase precursor (NCBI ptt file) compare
BT1613 -1.5 -6.1 conserved hypothetical protein (NCBI ptt file) compare
BT1293 -1.5 -10.2 alpha-glucan phosphorylase (NCBI ptt file) compare
BT4305 -1.5 -8.7 putative alpha-amylase (NCBI ptt file) compare
BT0546 -1.5 -3.1 conserved hypothetical protein (NCBI ptt file) compare
BT3761 -1.5 -3.5 N-succinylglutamate synthase (from data) compare
BT1871 -1.5 -8.3 putative alpha-glucosidase (NCBI ptt file) compare
BT2390 -1.5 -9.7 conserved hypothetical protein (NCBI ptt file) compare
BT3801 -1.5 -2.8 rteB, two-component system response regulator (NCBI ptt file) compare
BT0621 -1.5 -2.3 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) compare
BT4103 -1.5 -3.3 putative Sec-independent protein translocase (NCBI ptt file) compare
BT1564 -1.5 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0545 -1.4 -1.9 nitrogen regulatory protein P-II (NCBI ptt file) compare
BT2899 -1.4 -9.9 hypothetical protein (NCBI ptt file) compare
BT2136 -1.4 -4.6 putative purple acid phosphatase (NCBI ptt file) compare
BT4043 -1.4 -6.2 dimethyladenosine transferase (NCBI ptt file) compare
BT4193 -1.4 -7.4 dipeptidyl peptidase IV (NCBI ptt file) compare
BT3348 -1.4 -6.0 unsaturated glucuronide lyase acting on chondroitin/heparin disaccharides (EC 3.2.1.180) (from data) compare
BT0551 -1.4 -6.2 asparagine synthetase B [glutamine-hydrolyzing] (NCBI ptt file) compare
BT3338 -1.4 -9.5 RND efflux system for fusidic acid, chlorpromazine, and thioridazine, inner membrane component (from data) compare
BT4048 -1.4 -4.8 hypothetical protein (NCBI ptt file) compare
BT0139 -1.4 -3.6 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1952 -1.4 -6.2 Fe3+ ABC transporter, periplasmic iron-binding protein (NCBI ptt file) compare
BT0678 -1.4 -2.6 cation efflux system protein czcC (NCBI ptt file) compare
BT1844 -1.4 -2.7 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT3342 -1.4 -2.9 hypothetical protein (NCBI ptt file) compare
BT1698 -1.4 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT3843 -1.4 -3.3 ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) compare
BT2155 -1.3 -4.4 hypothetical protein (NCBI ptt file) compare
BT4421 -1.3 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0173 -1.3 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT0860 -1.3 -2.1 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2260 -1.3 -9.4 outer membrane protein Omp121 (NCBI ptt file) compare
BT1353 -1.3 -1.3 glycosyltransferase (NCBI ptt file) compare


Specific Phenotypes

For 3 genes in this experiment