Experiment set18IT024 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 8) - Cage1;Mouse2

200 most detrimental genes:

  gene name fitness t score description  
BT2744 +4.1 19.0 acetyltransferase (NCBI ptt file) compare
BT2760 +3.8 6.2 conserved hypothetical protein (NCBI ptt file) compare
BT2743 +2.5 10.5 putative aminopeptidase (NCBI ptt file) compare
BT1876 +2.2 5.1 putative anti-sigma factor (NCBI ptt file) compare
BT1874 +1.9 6.6 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0414 +1.7 2.4 sulfate adenylyltransferase subunit 2 (NCBI ptt file) compare
BT1872 +1.7 4.1 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT1262 +1.6 3.4 putative transcriptional regulator (NCBI ptt file) compare
BT0671 +1.5 3.3 outer membrane protein TolC, putative (NCBI ptt file) compare
BT3701 SusD +1.5 9.9 SusD, outer membrane protein (NCBI ptt file) compare
BT3705 SusR +1.4 10.1 regulatory protein SusR (NCBI ptt file) compare
BT0437 +1.4 2.4 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT3691 +1.4 3.3 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT2856 +1.3 4.7 hypothetical protein (NCBI ptt file) compare
BT4672 +1.3 4.7 hypothetical protein (NCBI ptt file) compare
BT1059 +1.3 7.2 putative UDP-glucose 4-epimerase (NCBI ptt file) compare
BT3133 +1.2 6.0 alpha-galactosidase (NCBI ptt file) compare
BT1588 +1.2 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT3690 +1.2 3.9 putative membrane protein (NCBI ptt file) compare
BT2853 +1.2 1.2 hypothetical protein (NCBI ptt file) compare
BT3700 SusE +1.2 7.4 SusE: Outer membrane amylopectin-binding protein (from data) compare
BT4326 +1.2 2.0 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0475 +1.2 2.5 putative phosphoheptose isomerase (NCBI ptt file) compare
BT3702 SusC +1.2 8.2 SusC, outer membrane protein involved in starch binding (NCBI ptt file) compare
BT0383 +1.1 4.6 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1704 +1.1 1.4 hypothetical protein (NCBI ptt file) compare
BT3703 SusB +1.1 7.2 alpha-glucosidase SusB (NCBI ptt file) compare
BT0868 +1.1 2.9 hypothetical protein (NCBI ptt file) compare
BT0911 +1.1 6.1 putative integration host factor IHF alpha subunit (NCBI ptt file) compare
BT1071 +1.1 3.4 hypothetical protein (NCBI ptt file) compare
BT0902 +1.1 2.7 hypothetical protein (NCBI ptt file) compare
BT1877 +1.0 2.5 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1200 +1.0 2.2 hypothetical protein (NCBI ptt file) compare
BT1873 +1.0 1.7 endo-arabinase (NCBI ptt file) compare
BT0225 +1.0 2.4 hypothetical protein (NCBI ptt file) compare
BT0067 +1.0 1.5 hypothetical protein (NCBI ptt file) compare
BT1088 +0.9 2.6 hypothetical protein (NCBI ptt file) compare
BT1309 +0.9 2.5 hypothetical protein (NCBI ptt file) compare
BT0220 +0.9 1.7 hypothetical protein (NCBI ptt file) compare
BT1875 +0.9 5.0 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0967 +0.9 2.2 hypothetical protein (NCBI ptt file) compare
BT1535 +0.9 2.2 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT0639 +0.9 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0327 +0.9 2.4 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) (NCBI ptt file) compare
BT0972 +0.9 1.7 putative oxidoreductase (NCBI ptt file) compare
BT0901 +0.9 2.7 putative universal stress protein UspA (NCBI ptt file) compare
BT2857 +0.9 3.7 hypothetical protein (NCBI ptt file) compare
BT2034 +0.9 2.7 two-component system response regulator (NCBI ptt file) compare
BT0151 +0.9 1.6 hypothetical protein (NCBI ptt file) compare
BT0376 +0.9 1.2 putative transcriptional regulator (NCBI ptt file) compare
BT0833 +0.9 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT3974 +0.9 5.1 conserved hypothetical protein (NCBI ptt file) compare
BT2339 +0.9 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT3794 +0.9 4.3 hypothetical protein (NCBI ptt file) compare
BT0013 +0.8 1.6 hypothetical protein (NCBI ptt file) compare
BT2593 +0.8 4.7 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1111 +0.8 3.5 hypothetical protein (NCBI ptt file) compare
BT4490 +0.8 2.3 hypothetical protein (NCBI ptt file) compare
BT3832 +0.8 3.7 conserved hypothetical protein (NCBI ptt file) compare
BT4360 +0.8 4.1 hypothetical protein (NCBI ptt file) compare
BT4318 +0.8 2.3 ATP-binding protein (NCBI ptt file) compare
BT1412 +0.8 2.4 iron-sulfur flavoprotein (NCBI ptt file) compare
BT1946 +0.8 2.0 hypothetical protein (NCBI ptt file) compare
BT1021 +0.8 3.4 arabinosidase (NCBI ptt file) compare
BT1505 +0.8 2.9 hypothetical protein (NCBI ptt file) compare
BT0337 +0.8 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT0761 +0.8 3.4 conserved hypothetical protein (NCBI ptt file) compare
BT1529 +0.8 3.5 two-component system response regulator (NCBI ptt file) compare
BT0462 +0.8 2.1 putative transcriptional regulator (NCBI ptt file) compare
BT0007 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT1679 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT4668 +0.8 2.0 arabinogalactan endo-1,4-beta-galactosidase (NCBI ptt file) compare
BT0417 +0.8 1.6 hypothetical protein (NCBI ptt file) compare
BT3132 +0.8 3.4 sialic acid-specific 9-O-acetylesterase (NCBI ptt file) compare
BT0004 +0.8 1.3 hypothetical protein (NCBI ptt file) compare
BT1058 +0.7 4.1 two-component system sensor histidine kinase (NCBI ptt file) compare
BT3926 +0.7 2.3 putative peptidase (NCBI ptt file) compare
BT1183 +0.7 4.9 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) compare
BT4685 +0.7 1.8 hypothetical protein (NCBI ptt file) compare
BT4545 +0.7 2.4 hypothetical protein (NCBI ptt file) compare
BT0782 +0.7 1.1 hypothetical protein (NCBI ptt file) compare
BT4670 +0.7 3.8 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1370 +0.7 2.3 NAD dependent nucleotide-diphosphate-sugar epimerase (NCBI ptt file) compare
BT0697 +0.7 1.6 putative phosphatase/phosphohexomutase (NCBI ptt file) compare
BT1055 +0.7 1.5 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT2043 +0.7 1.3 hypothetical protein (NCBI ptt file) compare
BT1715 +0.7 2.9 putative polysaccharide biosynthesis protein (NCBI ptt file) compare
BT1232 +0.7 1.1 hypothetical protein (NCBI ptt file) compare
BT0185 +0.7 0.8 conserved hypothetical protein (NCBI ptt file) compare
BT4123 +0.7 5.1 exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) compare
BT2854 +0.7 3.0 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT3286 +0.7 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1421 +0.7 2.1 hypothetical protein (NCBI ptt file) compare
BT4361 +0.7 3.1 hypothetical protein (NCBI ptt file) compare
BT1256 +0.7 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT1974 +0.7 3.7 metallopeptidase family M24, putative Xaa-Pro dipeptidase (NCBI ptt file) compare
BT4748 +0.7 2.5 hypothetical protein (NCBI ptt file) compare
BT1543 +0.7 2.9 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT2010 +0.7 1.2 hypothetical protein (NCBI ptt file) compare
BT0838 +0.7 2.5 putative RNA methyltransferase (NCBI ptt file) compare
BT0161 +0.7 1.8 putative permease (NCBI ptt file) compare
BT4031 +0.7 1.5 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0776 +0.7 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0850 +0.7 2.6 putative transcriptional regulator (NCBI ptt file) compare
BT4455 +0.7 1.6 oxidoreductase, putative glycolate oxidase (NCBI ptt file) compare
BT1532 +0.7 3.3 ABC transporter permease (NCBI ptt file) compare
BT0055 +0.7 2.8 putative glycosyltransferase (NCBI ptt file) compare
BT2295 +0.7 1.6 hypothetical protein (NCBI ptt file) compare
BT2045 +0.7 0.9 hypothetical protein (NCBI ptt file) compare
BT0344 +0.7 2.7 hypothetical protein (NCBI ptt file) compare
BT4747 +0.7 1.5 hypothetical protein (NCBI ptt file) compare
BT2541 +0.7 3.5 putative calcium-transporting ATPase (NCBI ptt file) compare
BT4671 +0.6 4.7 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0079 +0.6 2.2 putative anti-restriction protein (NCBI ptt file) compare
BT4764 +0.6 1.0 hypothetical protein (NCBI ptt file) compare
BT3747 +0.6 2.5 hypothetical protein (NCBI ptt file) compare
BT3869 +0.6 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT0178 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT1564 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT3721 +0.6 2.7 hypothetical protein (NCBI ptt file) compare
BT2781 +0.6 2.1 putative mannose-1-phosphate guanylyltransferase (NCBI ptt file) compare
BT4063 +0.6 1.3 NADH dehydrogenase I, chain I (NCBI ptt file) compare
BT1533 +0.6 3.5 conserved hypothetical protein (NCBI ptt file) compare
BT2120 +0.6 2.7 transcriptional regulator (NCBI ptt file) compare
BT2641 +0.6 2.7 hypothetical protein (NCBI ptt file) compare
BT3047 +0.6 4.1 hypothetical protein (NCBI ptt file) compare
BT1110 +0.6 2.6 hypothetical protein (NCBI ptt file) compare
BT2422 +0.6 2.8 conserved hypothetical protein (NCBI ptt file) compare
BT0028 +0.6 2.1 alkaline phosphatase (NCBI ptt file) compare
BT0402 +0.6 1.6 hypothetical protein (NCBI ptt file) compare
BT0085 +0.6 1.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3022 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT0777 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT2852 +0.6 2.7 putative beta-xylosidase (NCBI ptt file) compare
BT2381 +0.6 2.3 putative acetyltransferase (NCBI ptt file) compare
BT2589 +0.6 3.1 type I restriction enzyme, M subunit (NCBI ptt file) compare
BT1185 +0.6 5.0 OmpA-related protein (NCBI ptt file) compare
BT1519 +0.6 2.4 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0432 +0.6 2.5 putative endonuclease BB0411 (NCBI ptt file) compare
BT0294 +0.6 2.8 hypothetical protein (NCBI ptt file) compare
BT1124 +0.6 2.1 putative integrase (NCBI ptt file) compare
BT4544 +0.6 2.7 transposase (NCBI ptt file) compare
p5482_06 +0.6 3.7 mobilization protein A (NCBI) compare
BT1528 +0.6 2.6 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1466 +0.6 1.5 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT4525 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT1556 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT3352 +0.6 2.8 haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT0312 +0.6 3.9 2-oxoisovalerate dehydrogenase beta subunit (NCBI ptt file) compare
BT4526 +0.6 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1583 +0.6 1.2 putative protein disulfide isomerase (NCBI ptt file) compare
BT4693 +0.6 1.3 cation efflux system protein (NCBI ptt file) compare
BT0063 +0.6 0.6 hypothetical protein (NCBI ptt file) compare
BT1424 +0.6 1.8 hypothetical protein (NCBI ptt file) compare
BT2858 +0.6 3.4 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT4033 +0.6 2.6 hypothetical protein (NCBI ptt file) compare
BT0514 +0.6 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2287 +0.6 2.1 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3628 +0.6 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT2208 +0.6 2.3 hypothetical protein (NCBI ptt file) compare
BT0211 +0.6 2.6 hypothetical protein (NCBI ptt file) compare
BT0793 +0.6 1.8 xylose isomerase (NCBI ptt file) compare
BT2210 +0.6 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0600 +0.6 2.2 nucleotide sugar epimerase (NCBI ptt file) compare
BT1197 +0.6 1.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0964 +0.6 3.3 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT4036 +0.6 1.0 hypothetical protein (NCBI ptt file) compare
BT3387 +0.5 0.8 putative polysaccharide deacetylase (NCBI ptt file) compare
BT2605 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT1266 +0.5 2.4 putative two-component system sensor protein, no kinase domain (NCBI ptt file) compare
BT4687 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT1392 +0.5 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT2282 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT4752 +0.5 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2646 +0.5 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0086 +0.5 1.8 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3682 +0.5 2.3 hypothetical protein (NCBI ptt file) compare
BT0017 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT0388 +0.5 2.2 galactoside O-acetyltransferase (NCBI ptt file) compare
BT2116 +0.5 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3755 +0.5 3.7 acetyl-coenzyme A synthetase (NCBI ptt file) compare
BT3046 +0.5 4.4 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT2314 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT2366 +0.5 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT1258 +0.5 1.5 putative acetyltransferase (NCBI ptt file) compare
BT0286 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT1195 +0.5 1.2 monofunctional biosynthetic peptidoglycan transglycosylase (NCBI ptt file) compare
BT2520 +0.5 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT4677 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT2281 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT0820 +0.5 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0666 +0.5 2.4 hypothetical protein (NCBI ptt file) compare
BT1399 +0.5 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT2096 +0.5 2.9 putative transcriptional regulator (NCBI ptt file) compare
BT1048 +0.5 2.3 putative secreted endoglycosidase (NCBI ptt file) compare
BT4213 +0.5 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT2134 +0.5 1.5 putative HD superfamily hydrolase (NCBI ptt file) compare
BT1657 +0.5 1.5 integrase (NCBI ptt file) compare
BT0268 +0.5 2.6 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1107 +0.5 1.3 ferritin A (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in mouse_post_colonization experiments