Experiment set18IT021 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 6) - Cage3;Mouse2

200 most important genes:

  gene name fitness t score description  
BT1607 -5.8 -4.0 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT0892 -5.2 -3.6 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT1843 -5.0 -3.5 adenylosuccinate synthetase (NCBI ptt file) compare
BT3933 -4.9 -6.7 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1374 -4.6 -3.2 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT2396 -4.4 -5.3 putative membrane transporter involved in nicotinamide mononucleotide transport (NCBI ptt file) compare
BT0155 -4.2 -2.9 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) compare
BT3320 -4.2 -4.9 dihydrodipicolinate reductase (NCBI ptt file) compare
BT2438 -4.1 -6.3 hypothetical protein (NCBI ptt file) compare
BT3253 -4.1 -2.8 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT3733 -4.1 -13.0 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT0700 -4.0 -2.7 GTP pyrophosphokinase (NCBI ptt file) compare
BT3688 -3.9 -9.1 putative acetyltransferase (NCBI ptt file) compare
BT1758 -3.9 -4.6 fructose transporter (from data) compare
BT0555 -3.9 -6.4 amidophosphoribosyltransferase (NCBI ptt file) compare
BT1375 -3.8 -2.6 aspartokinase (NCBI ptt file) compare
BT0156 -3.8 -2.6 transcriptional regulator (NCBI ptt file) compare
BT4644 -3.7 -3.6 putative anti-sigma factor (NCBI ptt file) compare
BT4211 -3.7 -2.6 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT3821 -3.7 -12.3 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) compare
BT4572 -3.7 -7.0 enolase (NCBI ptt file) compare
BT3260 -3.6 -2.5 DNA polymerase I (NCBI ptt file) compare
BT0876 -3.6 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT0557 -3.6 -8.9 carbamyl phosphate synthetase (NCBI ptt file) compare
BT1733 -3.5 -3.4 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT4265 -3.5 -3.3 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT0249 -3.5 -2.4 5-methyltetrahydrofolate--homocysteine methyltransferase or methionine synthase (NCBI ptt file) compare
BT1747 -3.4 -4.0 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT2437 -3.4 -8.6 hypothetical protein (NCBI ptt file) compare
BT3936 -3.3 -2.3 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT0527 -3.3 -5.8 tryptophan synthase alpha chain (NCBI ptt file) compare
p5482_02 -3.3 -6.5 hypothetical protein (NCBI) compare
BT4300 -3.2 -2.2 transcription regulator, CRP family (NCBI ptt file) compare
BT0180 -3.2 -9.9 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) compare
BT3717 -3.1 -5.1 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT0556 -3.1 -2.1 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT0258 -3.0 -10.7 glucosamine-6-phosphate isomerase (NCBI ptt file) compare
BT1346 -3.0 -4.6 capsule biosynthesis protein capA (NCBI ptt file) compare
BT0891 -3.0 -3.5 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT2843 -3.0 -2.9 integrase (NCBI ptt file) compare
BT2403 -3.0 -13.1 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT3980 -3.0 -2.8 hypothetical protein (NCBI ptt file) compare
BT_2008 -2.9 -2.1 hypothetical protein (RefSeq) compare
BT1222 -2.9 -2.0 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT0547 -2.9 -6.3 aspartate aminotransferase (NCBI ptt file) compare
BT3268 -2.9 -2.0 glucose-inhibited division protein A (NCBI ptt file) compare
BT4551 -2.9 -2.0 putative GTPase, ThdF family (NCBI ptt file) compare
BT3981 -2.8 -1.9 hypothetical protein (NCBI ptt file) compare
BT1363 -2.8 -1.9 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT4610 -2.8 -3.2 RecA (NCBI ptt file) compare
BT1221 -2.8 -2.7 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT3935 -2.8 -5.5 aminotransferase (NCBI ptt file) compare
BT0771 -2.8 -4.5 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT1153 -2.7 -7.0 phosphoserine aminotransferase (NCBI ptt file) compare
BT1757 -2.6 -4.4 fructokinase (NCBI ptt file) compare
BT4191 -2.6 -8.4 hypothetical protein (NCBI ptt file) compare
BT1270 -2.6 -7.0 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1352 -2.5 -4.5 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT3758 -2.5 -5.0 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT4041 -2.5 -5.2 conserved hypothetical protein (NCBI ptt file) compare
BT0146 -2.5 -9.7 unsaturated glucuronyl hydrolase (NCBI ptt file) compare
BT1343 -2.4 -3.9 putative capsule biosynthesis protein (NCBI ptt file) compare
BT1558 -2.3 -4.4 hypothetical protein (NCBI ptt file) compare
BT1355 -2.3 -5.7 hypothetical protein (NCBI ptt file) compare
BT0578 -2.3 -6.6 excinuclease ABC subunit A (NCBI ptt file) compare
BT2386 -2.3 -8.2 AsnC family transcriptional regulator (NCBI ptt file) compare
BT3712 -2.3 -5.5 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT1339 -2.3 -6.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file) compare
BT0370 -2.3 -6.2 galactokinase (NCBI ptt file) compare
BT4174 -2.3 -7.3 conserved hypothetical protein (NCBI ptt file) compare
BT3549 -2.2 -8.3 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT1220 -2.2 -2.5 6-phosphogluconolactonase (NCBI ptt file) compare
BT1859 -2.1 -5.5 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT1739 -2.1 -11.5 excinuclease ABC subunit A (NCBI ptt file) compare
BT1857 -2.1 -7.6 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT2798 -2.1 -13.3 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT1844 -2.1 -3.8 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT0548 -2.1 -3.5 diaminopimelate epimerase (NCBI ptt file) compare
BT2841 -2.0 -3.3 pyruvate kinase (NCBI ptt file) compare
BT2236 -2.0 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT0728 -2.0 -4.2 transcriptional regulator (NCBI ptt file) compare
BT0621 -2.0 -3.0 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) compare
BT2062 -2.0 -8.8 6-phosphofructokinase (NCBI ptt file) compare
BT2136 -2.0 -5.3 putative purple acid phosphatase (NCBI ptt file) compare
BT1348 -2.0 -4.1 CDP-abequose synthase (NCBI ptt file) compare
BT1912 -2.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT3760 -2.0 -6.6 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT2153 -2.0 -2.9 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT1351 -1.9 -2.6 glucose-1-phosphate cytidylyltransferase (NCBI ptt file) compare
BT1759 -1.9 -5.3 levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file) compare
BT1439 -1.9 -9.0 Outer membrane binding protein for vancomycin (SusD-like) (from data) compare
BT1347 -1.9 -5.1 conserved hypothetical protein (NCBI ptt file) compare
BT3072 -1.9 -5.7 collagenase precursor (NCBI ptt file) compare
BT1358 -1.9 -4.1 putative transcriptional regulator (NCBI ptt file) compare
BT3894 -1.8 -4.8 putative methyltransferase (NCBI ptt file) compare
BT0570 -1.8 -5.7 excinuclease ABC subunit B (NCBI ptt file) compare
BT3431 -1.8 -4.9 DNA repair protein (NCBI ptt file) compare
BT1530 -1.8 -5.6 putative outer membrane protein OprM precursor (NCBI ptt file) compare
BT1340 -1.8 -5.4 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT1868 -1.8 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT2145 -1.8 -9.5 ribonucleoside-diphosphate reductase alpha chain (NCBI ptt file) compare
BT1915 -1.8 -5.0 pyruvate carboxylase subunit A (NCBI ptt file) compare
BT1979 -1.8 -3.5 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT0655 -1.8 -3.9 superoxide dismutase [Fe] (NCBI ptt file) compare
BT1345 -1.8 -4.0 glycosyltransferase (NCBI ptt file) compare
BT2387 -1.8 -6.9 O-acetylhomoserine (thiol)-lyase (NCBI ptt file) compare
BT0618 -1.8 -2.0 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfC (NCBI ptt file) compare
BT4649 -1.8 -2.2 hypothetical protein (NCBI ptt file) compare
BT1476 -1.8 -4.4 aspartate aminotransferase (NCBI ptt file) compare
BT2938 -1.8 -4.6 putative glycosyltransferase (NCBI ptt file) compare
BT0241 -1.7 -2.3 hypothetical protein (NCBI ptt file) compare
BT2413 -1.7 -7.8 homoserine O-succinyltransferase (NCBI ptt file) compare
BT2142 -1.7 -1.6 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT1341 -1.7 -4.7 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT2146 -1.7 -10.1 4-alpha-glucanotransferase (NCBI ptt file) compare
BT1641 -1.7 -1.8 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1390 -1.7 -3.3 conserved hypothetical protein (NCBI ptt file) compare
BT2059 -1.7 -1.9 TonB (NCBI ptt file) compare
BT2977 -1.7 -8.3 peptidylprolyl isomerase (NCBI ptt file) compare
BT2397 -1.6 -4.0 conserved hypothetical protein (NCBI ptt file) compare
BT3759 -1.6 -7.5 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT2161 -1.6 -4.0 50S ribosomal protein L9 (NCBI ptt file) compare
BT0967 -1.6 -2.3 hypothetical protein (NCBI ptt file) compare
BT1350 -1.6 -4.9 CDP-glucose 4,6-dehydratase (NCBI ptt file) compare
BT1746 -1.6 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT4049 -1.6 -5.1 putative ArgK protein with ATPase and kinase domains (NCBI ptt file) compare
BT3348 -1.6 -6.7 unsaturated glucuronide lyase acting on chondroitin/heparin disaccharides (EC 3.2.1.180) (from data) compare
BT3762 -1.6 -5.2 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT0177 -1.6 -3.6 hypothetical protein (NCBI ptt file) compare
BT0885 -1.6 -2.5 putative cation efflux pump (NCBI ptt file) compare
BT1354 -1.6 -5.8 putative flippase (NCBI ptt file) compare
BT0134 -1.5 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3395 -1.5 -6.6 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT2390 -1.5 -10.1 conserved hypothetical protein (NCBI ptt file) compare
BT1356 -1.5 -3.7 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT2003 -1.5 -1.3 putative membrane peptidase (NCBI ptt file) compare
BT3374 -1.5 -6.5 putative carbamoyl-phosphate-synthetase (NCBI ptt file) compare
BT1342 -1.5 -5.1 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT3022 -1.5 -1.7 hypothetical protein (NCBI ptt file) compare
BT0811 -1.5 -4.6 putative tRNA/rRNA methyltransferase (NCBI ptt file) compare
BT1344 -1.5 -5.2 putative glycosyltransferase (NCBI ptt file) compare
BT4322 -1.5 -2.2 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT4098 -1.5 -1.4 Trk system K+ uptake protein trkA (NCBI ptt file) compare
BT1082 -1.5 -7.6 Na+/solute symporter (NCBI ptt file) compare
BT4339 -1.5 -3.2 glutamine synthetase (NCBI ptt file) compare
BT4305 -1.5 -9.2 putative alpha-amylase (NCBI ptt file) compare
BT0739 -1.5 -1.9 hypothetical protein (NCBI ptt file) compare
BT3727 -1.5 -4.6 hypothetical protein (NCBI ptt file) compare
BT1917 -1.5 -5.3 propionyl-CoA carboxylase beta chain (NCBI ptt file) compare
BT3550 -1.4 -3.8 putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) compare
BT0954 -1.4 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1881 -1.4 -3.3 purine nucleoside phosphorylase I (NCBI ptt file) compare
BT0927 -1.4 -1.3 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1353 -1.4 -1.6 glycosyltransferase (NCBI ptt file) compare
BT1976 -1.4 -2.2 hypothetical protein (NCBI ptt file) compare
BT4381 -1.4 -3.3 hypothetical protein (NCBI ptt file) compare
BT3801 -1.4 -2.7 rteB, two-component system response regulator (NCBI ptt file) compare
BT1955 -1.4 -7.7 putative cell wall biogenesis protein (NCBI ptt file) compare
BT2546 -1.4 -4.4 transcriptional regulator (NCBI ptt file) compare
BT4723 -1.4 -2.8 putative anti-sigma factor (NCBI ptt file) compare
BT0412 -1.4 -4.2 putative Na+/sulfate symporter (NCBI ptt file) compare
BT2742 -1.4 -1.5 integrase, site-specific recombinase (NCBI ptt file) compare
BT2259 -1.4 -7.4 hypothetical protein (NCBI ptt file) compare
BT0702 -1.4 -3.0 chloramphenicol acetyltransferase (CAT-III) (NCBI ptt file) compare
BT2260 -1.3 -9.6 outer membrane protein Omp121 (NCBI ptt file) compare
BT0831 -1.3 -5.1 ATP-dependent RNA helicase (NCBI ptt file) compare
BT2148 -1.3 -3.0 glycosyltransferase (NCBI ptt file) compare
BT0957 -1.3 -4.7 conserved hypothetical protein (NCBI ptt file) compare
BT4330 -1.3 -6.1 xanthosine permease (NCBI ptt file) compare
BT0352 -1.3 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3376 -1.3 -5.2 nucleotide sugar transaminase (NCBI ptt file) compare
BT1326 -1.3 -1.4 TPR-domain containing protein (NCBI ptt file) compare
BT3372 -1.3 -5.3 glycosyltransferase (NCBI ptt file) compare
BT1091 -1.3 -6.0 cation-transporting ATPase pacS (NCBI ptt file) compare
BT1145 -1.3 -1.7 glucose-inhibited division protein (NCBI ptt file) compare
BT1953 -1.3 -6.0 putative TonB-linked outer membrane receptor (NCBI ptt file) compare
BT3810 -1.3 -4.7 putative endothelin-converting enzyme (NCBI ptt file) compare
BT1081 -1.3 -1.3 recombination protein recR (NCBI ptt file) compare
BT2570 -1.3 -7.9 glutamate decarboxylase (NCBI ptt file) compare
BT0896 -1.3 -1.8 putative patatin-like phospholipase (NCBI ptt file) compare
BT4658 -1.3 -3.6 glucuronyl hydrolase (NCBI ptt file) compare
BT1667 -1.2 -1.8 hypothetical protein (NCBI ptt file) compare
BT3973 -1.2 -2.2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) compare
BT3811 -1.2 -4.9 putative endothelin-converting enzyme (NCBI ptt file) compare
BT1578 -1.2 -4.0 putative metal dependent hydrolase (NCBI ptt file) compare
BT3761 -1.2 -3.1 N-succinylglutamate synthase (from data) compare
BT4304 -1.2 -7.4 putative glycosyltransferase (NCBI ptt file) compare
BT1916 -1.2 -4.6 conserved hypothetical protein (NCBI ptt file) compare
BT2167 -1.2 -6.8 elongation factor G (NCBI ptt file) compare
BT0956 -1.2 -4.5 conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) compare
BT1440 -1.2 -5.6 TonB-dependent receptor for vancomycin (SusC-like) (from data) compare
BT3195 -1.2 -3.5 conserved hypothetical protein (NCBI ptt file) compare
BT3462 -1.2 -3.6 TPR domain protein (NCBI ptt file) compare
BT1845 -1.2 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2280 -1.2 -2.2 hypothetical protein (NCBI ptt file) compare
BT1854 -1.2 -1.3 putative membrane-associated phospholipid phosphatase (NCBI ptt file) compare
BT2573 -1.2 -8.0 glutamate/gamma-aminobutyrate anti-porter (NCBI ptt file) compare
BT1263 -1.2 -1.8 putative protease I (NCBI ptt file) compare
BT3655 -1.2 -6.5 arabinosidase (NCBI ptt file) compare
BT3370 -1.2 -2.5 putative glycosyltransferase yibD (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in mouse_post_colonization experiments