Experiment set18IT017 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 4) - Cage4;Mouse1

200 most detrimental genes:

  gene name fitness t score description  
BT1667 +1.3 3.3 hypothetical protein (NCBI ptt file) compare
BT0844 +1.1 2.4 hypothetical protein (NCBI ptt file) compare
BT0397 +1.1 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1529 +1.1 4.9 two-component system response regulator (NCBI ptt file) compare
BT2744 +1.0 5.1 acetyltransferase (NCBI ptt file) compare
BT0417 +1.0 2.5 hypothetical protein (NCBI ptt file) compare
BT2134 +1.0 3.5 putative HD superfamily hydrolase (NCBI ptt file) compare
BT0846 +0.9 2.7 hypothetical protein (NCBI ptt file) compare
BT1392 +0.9 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT1535 +0.9 2.5 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT3286 +0.9 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1456 +0.9 2.2 thioredoxin (TRX) (NCBI ptt file) compare
BT0611 +0.8 2.1 glycosyltransferase (NCBI ptt file) compare
BT0878 +0.8 1.6 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT2760 +0.8 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0475 +0.8 2.4 putative phosphoheptose isomerase (NCBI ptt file) compare
BT2093 +0.8 2.9 hypothetical protein (NCBI ptt file) compare
BT0776 +0.8 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0936 +0.8 2.0 hypothetical protein (NCBI ptt file) compare
BT1524 +0.8 1.5 hypothetical protein (NCBI ptt file) compare
BT1058 +0.8 5.3 two-component system sensor histidine kinase (NCBI ptt file) compare
BT0376 +0.8 1.8 putative transcriptional regulator (NCBI ptt file) compare
BT1059 +0.8 3.7 putative UDP-glucose 4-epimerase (NCBI ptt file) compare
BT1162 +0.7 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0671 +0.7 2.2 outer membrane protein TolC, putative (NCBI ptt file) compare
BT1411 +0.7 1.4 methylated-DNA--protein-cysteine methyltransferase (NCBI ptt file) compare
BT1009 +0.7 2.3 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT0477 +0.7 1.7 putative phosphatase (NCBI ptt file) compare
BT2142 +0.7 1.3 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT2034 +0.7 2.6 two-component system response regulator (NCBI ptt file) compare
BT4687 +0.7 2.1 hypothetical protein (NCBI ptt file) compare
BT0797 +0.7 2.0 transcriptional regulator, ArsR family (NCBI ptt file) compare
BT1126 +0.7 2.1 mobilization protein BmgA (NCBI ptt file) compare
BT4494 +0.7 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0972 +0.7 1.5 putative oxidoreductase (NCBI ptt file) compare
BT4747 +0.7 1.7 hypothetical protein (NCBI ptt file) compare
BT1876 +0.7 2.7 putative anti-sigma factor (NCBI ptt file) compare
BT2449 +0.7 1.2 hypothetical protein (NCBI ptt file) compare
BT2781 +0.7 2.5 putative mannose-1-phosphate guanylyltransferase (NCBI ptt file) compare
BT0374 +0.7 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1511 +0.7 2.6 outer membrane protein OmpA (NCBI ptt file) compare
BT1262 +0.7 1.2 putative transcriptional regulator (NCBI ptt file) compare
BT0255 +0.7 1.7 hypothetical protein (NCBI ptt file) compare
BT0383 +0.7 2.5 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT3747 +0.6 2.4 hypothetical protein (NCBI ptt file) compare
BT0774 +0.6 2.2 conserved protein with a conserved patatin-like phospholipase domain (NCBI ptt file) compare
BT0046 +0.6 3.0 putative glycosyltransferase (NCBI ptt file) compare
BT1425 +0.6 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT4548 +0.6 2.5 putative protein involved in transposition (NCBI ptt file) compare
BT0564 +0.6 2.8 putative ABC transporter permease protein (NCBI ptt file) compare
BT0490 +0.6 1.2 hypothetical protein (NCBI ptt file) compare
BT1421 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT0607 +0.6 2.0 serine O-acetyltransferase (NCBI ptt file) compare
BT2375 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
BT0603 +0.6 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT4476 +0.6 3.1 amino acid carrier protein (NCBI ptt file) compare
BT2684 +0.6 1.2 hypothetical protein (NCBI ptt file) compare
BT0803 +0.6 2.2 integral membrane efflux pump, putative multidrug-efflux transporter (NCBI ptt file) compare
BT2361 +0.6 2.2 hypothetical protein (NCBI ptt file) compare
BT4249 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT2750 +0.6 2.7 putative protein-tyrosine-phosphatase (NCBI ptt file) compare
BT0842 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT4751 +0.6 1.4 hypothetical protein (NCBI ptt file) compare
BT0481 +0.6 1.4 polysaccharide export outer membrane protein (NCBI ptt file) compare
BT4545 +0.6 2.3 hypothetical protein (NCBI ptt file) compare
BT2853 +0.6 1.4 hypothetical protein (NCBI ptt file) compare
BT0869 +0.6 1.0 hypothetical protein (NCBI ptt file) compare
BT4733 +0.6 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT0437 +0.6 1.1 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT0048 +0.6 1.9 hypothetical protein (NCBI ptt file) compare
BT0858 +0.6 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3457 +0.6 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0511 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT0815 +0.6 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT0696 +0.6 2.2 putative membrane protein (NCBI ptt file) compare
BT3700 SusE +0.6 3.1 SusE: Outer membrane amylopectin-binding protein (from data) compare
BT3075 +0.6 4.3 NAD-dependent epimerase/dehydratase family protein (NCBI ptt file) compare
BT1470 +0.6 1.0 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT0261 +0.6 1.6 hypothetical protein (NCBI ptt file) compare
BT0024 +0.5 2.0 transposase (NCBI ptt file) compare
BT1410 +0.5 1.9 putative metallo-beta-lactamase (NCBI ptt file) compare
BT1309 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT0078 +0.5 2.7 putative DNA repair protein (NCBI ptt file) compare
BT3705 SusR +0.5 4.2 regulatory protein SusR (NCBI ptt file) compare
BT2045 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT3022 +0.5 0.7 hypothetical protein (NCBI ptt file) compare
BT2520 +0.5 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT1872 +0.5 2.7 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT1438 +0.5 2.5 putative membrane efflux protein (NCBI ptt file) compare
BT1055 +0.5 1.0 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT2743 +0.5 3.7 putative aminopeptidase (NCBI ptt file) compare
BT4646 +0.5 1.2 conserved hypothetical protein (NCBI ptt file) compare
BT1481 +0.5 2.7 hypothetical protein (NCBI ptt file) compare
BT0067 +0.5 0.6 hypothetical protein (NCBI ptt file) compare
BT1200 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT4384 +0.5 2.5 hypothetical protein (NCBI ptt file) compare
BT3703 SusB +0.5 3.6 alpha-glucosidase SusB (NCBI ptt file) compare
BT1693 +0.5 1.8 periplasmic linker protein, putative multidrug resistance protein (NCBI ptt file) compare
BT0474 +0.5 2.0 D-glycero-D-manno-heptose 1-phosphate kinase (NCBI ptt file) compare
BT0231 +0.5 1.2 excisionase (NCBI ptt file) compare
BT0473 +0.5 1.7 putative glycosyltransferase (NCBI ptt file) compare
BT1240 +0.5 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT2420 +0.5 3.4 two-component system histidine kinase, FrrD (NCBI ptt file) compare
BT1457 +0.5 1.7 two-component system response regulator (NCBI ptt file) compare
BT4449 +0.5 1.7 putative dehydrogenase (NCBI ptt file) compare
BT3738 +0.5 4.3 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) compare
BT0791 +0.5 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0242 +0.5 1.4 putative polysaccharide deacetylase (NCBI ptt file) compare
BT1559 +0.5 1.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3702 SusC +0.5 3.9 SusC, outer membrane protein involved in starch binding (NCBI ptt file) compare
BT4479 +0.5 1.6 integrase protein (NCBI ptt file) compare
BT2464 +0.5 3.0 hypothetical protein (NCBI ptt file) compare
BT1371 +0.5 2.4 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) compare
BT3133 +0.5 3.6 alpha-galactosidase (NCBI ptt file) compare
BT0670 +0.5 3.0 putative cation efflux system (NCBI ptt file) compare
BT0063 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT3772 +0.5 1.8 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT3510 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT0685 +0.5 2.6 putative Na+/H+ exchanger (NCBI ptt file) compare
BT0995 +0.5 2.2 transcription regulator, AraC-type (NCBI ptt file) compare
BT2272 +0.5 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT2633 +0.5 1.6 hypothetical protein (NCBI ptt file) compare
BT1528 +0.5 2.3 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1795 +0.5 2.3 putative two-component system sensor protein, no kinase domain (NCBI ptt file) compare
BT0585 +0.5 0.8 conserved hypothetical protein (NCBI ptt file) compare
BT4730 +0.5 1.6 hypothetical protein (NCBI ptt file) compare
BT4676 +0.5 1.5 putative periplasmic protein (NCBI ptt file) compare
BT3701 SusD +0.5 3.5 SusD, outer membrane protein (NCBI ptt file) compare
BT4086 +0.5 1.4 hypothetical protein (NCBI ptt file) compare
BT0648 +0.5 1.9 molybdopterin biosynthesis protein (NCBI ptt file) compare
BT1255 +0.5 1.9 hypothetical protein (NCBI ptt file) compare
BT0389 +0.5 1.1 putative galactoside acetyltransferase (NCBI ptt file) compare
BT2020 +0.5 2.4 putative phosphate/sulphate permeases (NCBI ptt file) compare
BT0757 +0.5 2.1 beta-galactosidase (NCBI ptt file) compare
BT0825 +0.5 1.2 altronate oxidoreductase (NCBI ptt file) compare
BT3694 +0.5 0.9 glycosyltransferase (NCBI ptt file) compare
BT1041 +0.5 1.4 integrase (NCBI ptt file) compare
BT1106 +0.5 1.6 fructose-bisphosphate aldolase class I (NCBI ptt file) compare
BT2083 +0.5 2.1 hypothetical protein (NCBI ptt file) compare
BT0779 +0.4 1.6 hypothetical protein (NCBI ptt file) compare
BT2929 +0.4 1.1 putative non-specific DNA-binding protein (NCBI ptt file) compare
BT1185 +0.4 4.0 OmpA-related protein (NCBI ptt file) compare
BT0060 +0.4 1.1 putative polysaccharide export protein (NCBI ptt file) compare
BT3466 +0.4 2.1 hypothetical protein (NCBI ptt file) compare
BT1203 +0.4 1.2 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1198 +0.4 1.9 LemA protein (NCBI ptt file) compare
BT0476 +0.4 0.9 D-mannose-1-phosphate guanyltransferase (NCBI ptt file) compare
BT1532 +0.4 2.5 ABC transporter permease (NCBI ptt file) compare
BT0208 +0.4 1.5 hypothetical protein (NCBI ptt file) compare
BT1258 +0.4 1.0 putative acetyltransferase (NCBI ptt file) compare
BT2287 +0.4 1.7 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1315 +0.4 1.8 ribonuclease BN (NCBI ptt file) compare
p5482_36 +0.4 2.7 hypothetical protein (NCBI) compare
BT0098 +0.4 0.7 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0690 +0.4 1.7 two-component system response regulator (NCBI ptt file) compare
BT1116 +0.4 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT2021 +0.4 0.9 conserved hypothetical protein, putative non-specific DNA-binding protein (NCBI ptt file) compare
BT3140 +0.4 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1416 +0.4 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1195 +0.4 1.2 monofunctional biosynthetic peptidoglycan transglycosylase (NCBI ptt file) compare
BT0259 +0.4 2.1 putative amidohydrolase (NCBI ptt file) compare
BT2996 +0.4 1.6 hypothetical protein (NCBI ptt file) compare
BT3629 +0.4 1.8 hypothetical protein (NCBI ptt file) compare
BT0013 +0.4 0.9 hypothetical protein (NCBI ptt file) compare
BT0880 +0.4 1.0 hypothetical protein (NCBI ptt file) compare
BT1464 +0.4 0.9 putative acetyltransferase, (GNAT) family (NCBI ptt file) compare
BT0392 +0.4 1.6 lipopolysaccharide biosynthesis RfbU-related protein (NCBI ptt file) compare
BT3941 +0.4 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1466 +0.4 1.1 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT4469 +0.4 1.0 conserved hypothetical protein (NCBI ptt file) compare
BT2218 +0.4 2.0 hypothetical protein (NCBI ptt file) compare
BT2433 +0.4 2.8 two-component system response regulator (NCBI ptt file) compare
BT0963 +0.4 2.0 putative ferredoxin-type protein (NCBI ptt file) compare
BT0387 +0.4 2.0 NADH dehydrogenase subunit 2 (NCBI ptt file) compare
BT4118 +0.4 2.1 putative two-component system response regulator, no kinase domain (NCBI ptt file) compare
BT0225 +0.4 0.9 hypothetical protein (NCBI ptt file) compare
BT2379 +0.4 2.4 hypothetical protein (NCBI ptt file) compare
BT2424 +0.4 2.6 K+-transporting ATPase B chain (NCBI ptt file) compare
BT2478 +0.4 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0414 +0.4 0.7 sulfate adenylyltransferase subunit 2 (NCBI ptt file) compare
BT0884 +0.4 1.6 outer membrane efflux protein oprM precursor (NCBI ptt file) compare
BT1902 +0.4 2.1 pyrroline-5-carboxylate reductase (NCBI ptt file) compare
BT3737 +0.4 1.0 hypothetical protein (NCBI ptt file) compare
BT2471 +0.4 1.3 hypothetical protein (NCBI ptt file) compare
BT0850 +0.4 1.7 putative transcriptional regulator (NCBI ptt file) compare
BT0636 +0.4 2.0 putative transcriptional regulator (NCBI ptt file) compare
BT2187 +0.4 2.3 putative cAMP-binding domain-containing regulatory protein (NCBI ptt file) compare
BT1088 +0.4 0.9 hypothetical protein (NCBI ptt file) compare
BT1132 +0.4 1.3 hypothetical protein (NCBI ptt file) compare
BT2310 +0.4 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0240 +0.4 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT3627 +0.4 1.9 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT1388 +0.4 1.2 integral membrane protein (NCBI ptt file) compare
BT1606 +0.4 2.3 cytochrome C peroxidase (NCBI ptt file) compare
BT2490 +0.4 1.0 hypothetical protein (NCBI ptt file) compare
BT4763 +0.4 1.0 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1855 +0.4 1.1 putative methyl transferase (NCBI ptt file) compare
BT0830 +0.4 2.1 hypothetical protein (NCBI ptt file) compare
BT2303 +0.4 1.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0630 +0.4 1.9 exodeoxyribonuclease (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in mouse_post_colonization experiments