Experiment set18IT014 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 4) - Cage1;Mouse2

200 most detrimental genes:

  gene name fitness t score description  
BT2744 +1.7 7.6 acetyltransferase (NCBI ptt file) compare
BT3691 +1.3 4.1 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0848 +1.3 3.0 hypothetical protein (NCBI ptt file) compare
BT3286 +1.3 3.8 conserved hypothetical protein (NCBI ptt file) compare
BT4571 +1.2 3.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1304 +1.1 1.9 putative transcriptional regulator (NCBI ptt file) compare
BT0692 +1.1 2.3 putative calcineurin superfamily phosphohydrolase (NCBI ptt file) compare
BT1529 +1.1 4.6 two-component system response regulator (NCBI ptt file) compare
BT2424 +1.1 7.2 K+-transporting ATPase B chain (NCBI ptt file) compare
BT2420 +1.1 7.9 two-component system histidine kinase, FrrD (NCBI ptt file) compare
BT1058 +1.1 6.5 two-component system sensor histidine kinase (NCBI ptt file) compare
BT2433 +1.0 7.1 two-component system response regulator (NCBI ptt file) compare
BT4490 +1.0 3.0 hypothetical protein (NCBI ptt file) compare
BT0417 +1.0 2.4 hypothetical protein (NCBI ptt file) compare
BT0024 +0.9 3.2 transposase (NCBI ptt file) compare
BT2685 +0.9 3.3 hypothetical protein (NCBI ptt file) compare
BT4322 +0.9 2.3 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT2781 +0.9 3.5 putative mannose-1-phosphate guanylyltransferase (NCBI ptt file) compare
BT1059 +0.9 4.1 putative UDP-glucose 4-epimerase (NCBI ptt file) compare
BT1201 +0.9 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT2344 +0.9 2.3 hypothetical protein (NCBI ptt file) compare
BT2425 +0.9 6.5 K+-transporting ATPase A chain (NCBI ptt file) compare
BT3387 +0.9 1.6 putative polysaccharide deacetylase (NCBI ptt file) compare
BT2417 +0.9 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1262 +0.8 1.7 putative transcriptional regulator (NCBI ptt file) compare
BT3690 +0.8 2.9 putative membrane protein (NCBI ptt file) compare
BT1227 +0.8 3.4 conserved hypothetical protein (NCBI ptt file) compare
BT1470 +0.8 2.5 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT3770 +0.8 1.7 transcriptional regulator (NCBI ptt file) compare
BT1230 +0.8 2.2 hypothetical protein (NCBI ptt file) compare
BT2093 +0.8 2.4 hypothetical protein (NCBI ptt file) compare
BT0774 +0.8 2.1 conserved protein with a conserved patatin-like phospholipase domain (NCBI ptt file) compare
BT0671 +0.8 2.3 outer membrane protein TolC, putative (NCBI ptt file) compare
BT3737 +0.8 1.8 hypothetical protein (NCBI ptt file) compare
BT2589 +0.8 3.7 type I restriction enzyme, M subunit (NCBI ptt file) compare
BT0514 +0.8 3.4 conserved hypothetical protein (NCBI ptt file) compare
BT0389 +0.8 2.1 putative galactoside acetyltransferase (NCBI ptt file) compare
BT1392 +0.8 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT4031 +0.8 3.3 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT2010 +0.8 1.7 hypothetical protein (NCBI ptt file) compare
BT2684 +0.8 1.3 hypothetical protein (NCBI ptt file) compare
BT1250 +0.8 3.1 conserved hypothetical protein, putative outer membrane efflux protein (NCBI ptt file) compare
BT1329 +0.8 2.3 putative thiol peroxidase (NCBI ptt file) compare
BT0844 +0.8 1.5 hypothetical protein (NCBI ptt file) compare
BT0937 +0.8 2.2 hypothetical protein (NCBI ptt file) compare
BT1872 +0.7 3.2 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT0828 +0.7 1.3 dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) compare
BT0491 +0.7 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1532 +0.7 3.9 ABC transporter permease (NCBI ptt file) compare
BT2423 +0.7 3.8 K+-transporting ATPase C chain (NCBI ptt file) compare
BT2593 +0.7 2.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3209 +0.7 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT4746 +0.7 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0474 +0.7 2.8 D-glycero-D-manno-heptose 1-phosphate kinase (NCBI ptt file) compare
BT0392 +0.7 2.6 lipopolysaccharide biosynthesis RfbU-related protein (NCBI ptt file) compare
BT2743 +0.7 4.5 putative aminopeptidase (NCBI ptt file) compare
BT2471 +0.7 2.4 hypothetical protein (NCBI ptt file) compare
BT0585 +0.7 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1111 +0.7 2.4 hypothetical protein (NCBI ptt file) compare
BT0418 +0.7 1.8 outer membrane porin F precursor (NCBI ptt file) compare
BT0833 +0.7 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT1962 +0.7 1.5 hypothetical protein (NCBI ptt file) compare
BT2034 +0.7 2.5 two-component system response regulator (NCBI ptt file) compare
BT0063 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT0125 +0.7 3.0 NADH:ubiquinone oxidoreductase subunit (NCBI ptt file) compare
BT1126 +0.7 1.3 mobilization protein BmgA (NCBI ptt file) compare
BT0443 +0.7 1.7 thermostable beta-glucosidase B (NCBI ptt file) compare
BT0397 +0.7 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT1071 +0.7 1.9 hypothetical protein (NCBI ptt file) compare
BT3705 SusR +0.7 4.9 regulatory protein SusR (NCBI ptt file) compare
BT1207 +0.7 1.9 glycerate dehydrogenase (NADH-dependent) (NCBI ptt file) compare
BT1183 +0.7 4.6 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) compare
BT0337 +0.7 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT2375 +0.6 1.7 hypothetical protein (NCBI ptt file) compare
BT0751 +0.6 2.2 putative efflux pump component protein (NCBI ptt file) compare
BT0796 +0.6 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT0846 +0.6 1.8 hypothetical protein (NCBI ptt file) compare
BT0199 +0.6 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT3342 +0.6 2.6 hypothetical protein (NCBI ptt file) compare
BT0560 +0.6 2.0 outer membrane efflux protein (NCBI ptt file) compare
BT3755 +0.6 4.4 acetyl-coenzyme A synthetase (NCBI ptt file) compare
BT1088 +0.6 1.4 hypothetical protein (NCBI ptt file) compare
BT0831 +0.6 4.4 ATP-dependent RNA helicase (NCBI ptt file) compare
BT2760 +0.6 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT3701 SusD +0.6 4.6 SusD, outer membrane protein (NCBI ptt file) compare
BT3941 +0.6 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT0740 +0.6 0.9 flavoredoxin (NCBI ptt file) compare
BT2358 +0.6 1.3 hypothetical protein (NCBI ptt file) compare
BT2487 +0.6 1.6 hypothetical protein (NCBI ptt file) compare
BT0967 +0.6 0.8 hypothetical protein (NCBI ptt file) compare
BT4424 +0.6 1.8 sorbitol dehydrogenase (NCBI ptt file) compare
BT3700 SusE +0.6 3.2 SusE: Outer membrane amylopectin-binding protein (from data) compare
BT0584 +0.6 1.5 putative outer membrane protein (NCBI ptt file) compare
BT3133 +0.6 4.1 alpha-galactosidase (NCBI ptt file) compare
BT0669 +0.6 2.3 putative cation efflux system protein (NCBI ptt file) compare
BT2410 +0.6 2.6 putative acetyltransferase (NCBI ptt file) compare
BT0731 +0.6 1.6 hypothetical protein (NCBI ptt file) compare
BT2741 +0.6 2.1 sigma-54 modulation protein (NCBI ptt file) compare
BT1528 +0.6 3.3 two-component system sensor histidine kinase (NCBI ptt file) compare
BT3510 +0.6 1.7 hypothetical protein (NCBI ptt file) compare
BT4025 +0.6 0.8 hypothetical protein (NCBI ptt file) compare
BT0313 +0.6 1.0 flavodoxin (NCBI ptt file) compare
BT1130 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT0383 +0.6 2.3 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1410 +0.6 2.3 putative metallo-beta-lactamase (NCBI ptt file) compare
BT0098 +0.6 1.1 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2037 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT3457 +0.6 2.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3703 SusB +0.6 4.1 alpha-glucosidase SusB (NCBI ptt file) compare
BT4562 +0.6 1.1 hypothetical protein (NCBI ptt file) compare
BT1234 +0.6 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT2295 +0.6 1.7 hypothetical protein (NCBI ptt file) compare
BT4735 +0.6 1.7 hypothetical protein (NCBI ptt file) compare
BT4494 +0.6 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1641 +0.6 1.1 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT0017 +0.6 2.1 hypothetical protein (NCBI ptt file) compare
BT0462 +0.5 1.4 putative transcriptional regulator (NCBI ptt file) compare
BT4618 +0.5 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT0912 +0.5 1.0 DNA-binding protein HU (NCBI ptt file) compare
BT1229 +0.5 0.9 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0211 +0.5 3.1 hypothetical protein (NCBI ptt file) compare
BT0409 +0.5 1.9 putative short-chain dehydrogenase (NCBI ptt file) compare
BT0761 +0.5 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT4036 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT0007 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT4529 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT2281 +0.5 1.5 hypothetical protein (NCBI ptt file) compare
BT0776 +0.5 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT2605 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT1070 +0.5 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT1009 +0.5 1.5 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT0991 +0.5 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1463 +0.5 1.9 putative acetyltransferase (NCBI ptt file) compare
BT1849 +0.5 0.9 hypothetical protein (NCBI ptt file) compare
BT1874 +0.5 2.7 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0686 +0.5 2.2 putative uracil permease (uracil transporter) (NCBI ptt file) compare
BT0773 +0.5 2.7 alpha-amylase 3 (NCBI ptt file) compare
BT0850 +0.5 2.2 putative transcriptional regulator (NCBI ptt file) compare
BT3730 +0.5 1.0 putative regulatory protein (NCBI ptt file) compare
BT0294 +0.5 2.7 hypothetical protein (NCBI ptt file) compare
BT1576 +0.5 0.9 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT2339 +0.5 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT3702 SusC +0.5 3.9 SusC, outer membrane protein involved in starch binding (NCBI ptt file) compare
BT3911 +0.5 1.4 malate dehydrogenase (NCBI ptt file) compare
BT2315 +0.5 1.1 hypothetical protein (NCBI ptt file) compare
BT1713 +0.5 1.8 putative acylneuraminate cytidylyltransferase (NCBI ptt file) compare
BT3075 +0.5 3.4 NAD-dependent epimerase/dehydratase family protein (NCBI ptt file) compare
BT0795 +0.5 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT0124 +0.5 2.2 NADH:ubiquinone oxidoreductase subunit (NCBI ptt file) compare
p5482_04 +0.5 3.3 hypothetical protein (NCBI) compare
BT0821 +0.5 2.3 putative permease (NCBI ptt file) compare
BT4479 +0.5 2.3 integrase protein (NCBI ptt file) compare
BT2381 +0.5 2.3 putative acetyltransferase (NCBI ptt file) compare
BT2686 +0.5 3.5 putative cation efflux transporter (NCBI ptt file) compare
BT1399 +0.5 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT3185 +0.5 2.0 hypothetical protein (NCBI ptt file) compare
BT1533 +0.5 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT0437 +0.5 1.0 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT2318 +0.5 2.2 hypothetical protein (NCBI ptt file) compare
BT4192 +0.5 2.7 lipoic acid synthetase (NCBI ptt file) compare
BT4504 +0.5 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0611 +0.5 1.0 glycosyltransferase (NCBI ptt file) compare
BT0213 +0.5 2.2 hypothetical protein (NCBI ptt file) compare
BT2298 +0.5 3.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4149 +0.5 1.9 exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) compare
BT1162 +0.5 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1107 +0.5 1.6 ferritin A (NCBI ptt file) compare
BT1990 +0.5 1.0 hypothetical protein (NCBI ptt file) compare
BT2689 +0.5 2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1803 +0.5 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1202 +0.5 1.0 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT0583 +0.5 1.8 hypothetical protein (NCBI ptt file) compare
BT1195 +0.5 1.4 monofunctional biosynthetic peptidoglycan transglycosylase (NCBI ptt file) compare
BT1005 +0.5 0.8 hypothetical protein (NCBI ptt file) compare
BT1876 +0.5 1.8 putative anti-sigma factor (NCBI ptt file) compare
BT1258 +0.5 1.5 putative acetyltransferase (NCBI ptt file) compare
BT1421 +0.5 2.2 hypothetical protein (NCBI ptt file) compare
BT1559 +0.5 1.5 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1474 +0.5 2.5 ribosomal protein S6 modification protein-related protein (NCBI ptt file) compare
BT1167 +0.5 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT0200 +0.5 2.1 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT3783 +0.5 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT0654 +0.5 2.3 two-component sensor histidine kinase (NCBI ptt file) compare
BT1867 +0.5 1.2 hypothetical protein (NCBI ptt file) compare
BT1370 +0.5 1.5 NAD dependent nucleotide-diphosphate-sugar epimerase (NCBI ptt file) compare
BT3630 +0.5 2.6 hypothetical protein (NCBI ptt file) compare
BT0471 +0.5 1.5 glycosyltransferase (NCBI ptt file) compare
BT0825 +0.5 1.2 altronate oxidoreductase (NCBI ptt file) compare
BT1388 +0.4 1.5 integral membrane protein (NCBI ptt file) compare
BT1875 +0.4 3.1 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0472 +0.4 1.3 putative acyltransferase in colanic acid biosynthesis (NCBI ptt file) compare
BT4668 +0.4 1.1 arabinogalactan endo-1,4-beta-galactosidase (NCBI ptt file) compare
BT1424 +0.4 1.5 hypothetical protein (NCBI ptt file) compare
BT1974 +0.4 2.2 metallopeptidase family M24, putative Xaa-Pro dipeptidase (NCBI ptt file) compare
BT0167 +0.4 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1609 +0.4 1.3 conserved hypothetical protein (NCBI ptt file) compare
p5482_36 +0.4 2.5 hypothetical protein (NCBI) compare
BT2067 +0.4 2.2 putative NADH:flavin oxidoreductase (NCBI ptt file) compare
BT3434 +0.4 3.3 hypothetical protein (NCBI ptt file) compare
BT0498 +0.4 1.5 hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

For 3 genes in this experiment