Experiment set17S955 for Phocaeicola vulgatus CL09T03C04

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Surya_sugar_mix mhCom Varel_Bryant_medium_lowCys Passage2

Group: mixed community
Media: Varel_Bryant_medium_lowCys + 1X Surya_sugar_mix + mhCom
Culturing: Bvulgatus_CL09T03C04_ML5, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Surya on 10/8/25
Media components: 15 uM Hemin, 134 uM L-Methionine, 15 uM Iron (II) sulfate heptahydrate, 3 mM L-Cysteine, 23.8 mM Sodium bicarbonate, Mineral 3B solution (6.6 mM Potassium phosphate monobasic, 15.4 mM Sodium Chloride, 98 uM Magnesium chloride hexahydrate, 176.5 uM Calcium chloride dihydrate, 4.2 uM Cobalt chloride hexahydrate, 50.5 uM Manganese (II) chloride tetrahydrate, 9.3 mM Ammonium chloride, 1.75 mM Sodium sulfate)

Surya_sugar_mix 1x includes: 1.43 mM D-Glucose, 1.43 mM D-Glucose-6-Phosphate sodium salt, 1.43 mM Fructose-6-phosphate, 0.72 g/L Starch soluble, 0.72 g/L Pectic galactan from potato, 0.72 g/L Mucin from porcine stomach type III, 0.72 g/L Red Arabinan from sugar-beet

Specific Phenotypes

For 1 genes in this experiment

For mixed community Surya_sugar_mix in Phocaeicola vulgatus CL09T03C04

For mixed community Surya_sugar_mix across organisms

SEED Subsystems

Subsystem #Specific
Queuosine-Archaeosine Biosynthesis 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes: