Experiment set17IT058 for Pseudomonas stutzeri RCH2

Compare to:

LB with Choline chloride 90 mM

Genes with specific phenotypes:

  gene name fitness t score description  
Psest_2095 -4.1 -9.8 Arabinose efflux permease compare
Psest_1535 -3.8 -5.1 FKBP-type peptidyl-prolyl cis-trans isomerases 1 conserved
Psest_2465 -3.5 -6.2 hypothetical protein compare
Psest_2634 -3.3 -5.3 glycine betaine aldehyde dehydrogenase conserved
Psest_1335 -2.5 -11.0 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) compare
Psest_2633 -2.0 -7.8 choline dehydrogenase conserved
Psest_3505 -2.0 -5.0 Superfamily II DNA and RNA helicases compare
Psest_0870 -1.9 -6.6 Alpha-glucosidase (EC 3.2.1.20) (from data) compare
Psest_4099 -1.9 -11.3 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Psest_1462 -1.9 -5.1 3-oxoacyl-[acyl-carrier-protein] synthase III compare
Psest_2085 -1.8 -6.9 Periplasmic serine proteases (ClpP class) compare
Psest_0455 -1.6 -5.6 ADP-heptose:LPS heptosyltransferase compare
Psest_2314 -1.6 -5.5 Mg2+ and Co2+ transporters conserved
Psest_1939 -1.4 -5.5 Tetratricopeptide repeat. compare
Psest_1943 -1.3 -5.6 MoxR-like ATPases compare
Psest_4320 -1.2 -5.3 Zn-dependent oligopeptidases compare
Psest_1995 +1.1 5.0 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific compare
Psest_2636 +1.2 5.6 tryptophan synthase, beta subunit compare
Psest_4283 +1.3 6.6 Spermidine/putrescine-binding periplasmic protein compare
Psest_0531 +1.4 7.7 Phosphate starvation-inducible protein PhoH, predicted ATPase compare
Psest_0335 +1.5 7.2 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_1627 +1.5 8.0 Superfamily II DNA and RNA helicases compare
Psest_3314 +1.5 6.2 ribosomal subunit interface protein compare
Psest_2070 +1.5 7.3 FOG: LysM repeat compare
Psest_1484 +1.6 9.2 Thiol-disulfide isomerase and thioredoxins compare
Psest_1016 +1.7 6.7 putative TIM-barrel protein, nifR3 family compare
Psest_2672 +2.4 7.7 Predicted membrane protein compare
Psest_3776 +2.5 12.5 choline/carnitine/betaine transport compare
Psest_2673 +3.5 19.2 Arabinose efflux permease compare


Specific phenotypes for stress Choline chloride across organisms