Experiment set17IT054 for Pseudomonas stutzeri RCH2

Compare to:

LB with Furfuryl Alcohol 0.3 vol%

200 most important genes:

  gene name fitness t score description  
Psest_0398 -4.7 -9.5 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain compare
Psest_0309 -4.4 -1.8 RND family efflux transporter, MFP subunit compare
Psest_1496 -4.4 -1.8 Holliday junction DNA helicase, RuvA subunit compare
Psest_3960 -4.0 -1.9 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_0310 -3.3 -3.9 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Psest_3092 -3.0 -2.7 ribonuclease III, bacterial compare
Psest_0725 -3.0 -2.5 Negative regulator of beta-lactamase expression compare
Psest_3862 -2.8 -14.6 phosphoenolpyruvate-protein phosphotransferase compare
Psest_1463 -2.7 -1.3 SufE protein probably involved in Fe-S center assembly compare
Psest_3531 -2.5 -1.9 Peptidase propeptide and YPEB domain. compare
Psest_0013 -2.5 -5.5 Lauroyl/myristoyl acyltransferase compare
Psest_3546 -2.5 -1.4 Phosphatidylglycerophosphatase A and related proteins compare
Psest_0062 -2.4 -9.2 tryptophan synthase, alpha subunit compare
Psest_0498 -2.4 -2.1 ribosome small subunit-dependent GTPase A compare
Psest_0311 -2.4 -7.6 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_2530 -2.3 -5.3 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_2527 -2.3 -7.8 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_3031 -2.3 -0.9 hypothetical protein compare
Psest_3351 -2.2 -6.5 peptide chain release factor 3 compare
Psest_3998 -2.2 -9.4 glutamate--cysteine ligase compare
Psest_4219 -2.2 -3.4 DNA polymerase I compare
Psest_2946 -2.2 -3.3 septum site-determining protein MinD compare
Psest_3247 -2.2 -1.1 Uncharacterized membrane protein compare
Psest_3317 -2.2 -3.8 Phosphotransferase System HPr (HPr) Family compare
Psest_0296 -2.1 -9.9 glutathione synthetase, prokaryotic compare
Psest_2651 -2.1 -4.5 DNA topoisomerase I, bacterial compare
Psest_1804 -2.1 -2.0 Superfamily II DNA and RNA helicases compare
Psest_1659 -2.1 -3.1 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_3565 -1.9 -1.8 hypothetical protein compare
Psest_2018 -1.9 -3.7 Uncharacterized conserved protein compare
Psest_2025 -1.9 -1.0 cold shock domain protein CspD compare
Psest_0063 -1.8 -8.6 tryptophan synthase, beta subunit compare
Psest_2333 -1.8 -1.0 Protein of unknown function (DUF3359). compare
Psest_4191 -1.8 -3.5 Transcriptional regulator compare
Psest_3767 -1.8 -4.3 tyrosine recombinase XerC compare
Psest_0442 -1.8 -2.9 ATPases of the AAA+ class compare
Psest_3146 -1.8 -1.8 hypothetical protein compare
Psest_2532 -1.7 -3.5 Uncharacterized protein conserved in bacteria compare
Psest_0212 -1.7 -2.7 exodeoxyribonuclease V, gamma subunit compare
Psest_3301 -1.7 -3.6 Predicted transcriptional regulator, BolA superfamily compare
Psest_2872 -1.7 -2.1 protein RecA compare
Psest_0031 -1.7 -1.9 Uncharacterized conserved protein compare
Psest_3938 -1.7 -3.2 Uncharacterized protein conserved in bacteria compare
Psest_3496 -1.7 -1.6 Predicted metal-binding protein compare
Psest_1752 -1.6 -1.6 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB compare
Psest_2531 -1.6 -8.3 cytochrome c oxidase accessory protein FixG compare
Psest_0466 -1.6 -3.6 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_3100 -1.6 -1.1 RNA polymerase sigma factor RpoE compare
Psest_4049 -1.6 -1.8 hypothetical protein compare
Psest_2579 -1.6 -5.5 amidophosphoribosyltransferase compare
Psest_0401 -1.6 -2.7 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_4274 -1.6 -2.1 hypothetical protein compare
Psest_3129 -1.6 -1.2 tyrosine recombinase XerD compare
Psest_0097 -1.6 -1.9 phosphonates metabolism transcriptional regulator PhnF compare
Psest_1179 -1.5 -1.8 2-hydroxy-3-oxopropionate reductase compare
Psest_2520 -1.5 -1.7 Predicted SAM-dependent methyltransferase compare
Psest_3047 -1.5 -0.9 methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain compare
Psest_2584 -1.5 -4.4 Phosphoribosylanthranilate isomerase compare
Psest_0696 -1.5 -5.0 hypothetical protein compare
Psest_0718 -1.5 -3.4 nicotinate-nucleotide pyrophosphorylase compare
Psest_1601 -1.5 -2.1 Signal transduction histidine kinase compare
Psest_1013 -1.4 -3.4 phosphoribosylamine--glycine ligase compare
Psest_2775 -1.4 -3.0 Glycerol-3-phosphate dehydrogenase compare
Psest_4335 -1.4 -1.6 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Psest_2850 -1.4 -1.3 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_3185 -1.4 -1.3 MoxR-like ATPases compare
Psest_0028 -1.4 -2.8 Coproporphyrinogen III oxidase compare
Psest_3790 -1.4 -7.3 Cytochrome c5 compare
Psest_2566 -1.4 -0.9 Uncharacterized protein conserved in bacteria compare
Psest_0449 -1.3 -7.8 Glutamine synthetase adenylyltransferase compare
Psest_3159 -1.3 -5.1 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_1656 -1.3 -1.7 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_2988 -1.3 -5.0 aspartate kinase, monofunctional class compare
Psest_3926 -1.3 -7.4 GTP-binding protein TypA/BipA compare
Psest_3226 -1.3 -1.0 Predicted membrane protein compare
Psest_1888 -1.3 -0.9 Sua5/YciO/YrdC/YwlC family protein compare
Psest_3910 -1.3 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_4044 -1.3 -2.7 type I site-specific deoxyribonuclease, HsdR family compare
Psest_1306 -1.3 -1.4 hypothetical protein compare
Psest_4307 -1.3 -2.9 ABC-type Zn2+ transport system, periplasmic component/surface adhesin compare
Psest_2814 -1.3 -6.5 NADH:flavin oxidoreductases, Old Yellow Enzyme family conserved
Psest_3762 -1.3 -2.6 iron donor protein CyaY compare
Psest_3178 -1.3 -2.7 formyltetrahydrofolate deformylase compare
Psest_0691 -1.2 -7.2 ribonuclease R compare
Psest_0558 -1.2 -0.7 urease, beta subunit compare
Psest_3338 -1.2 -1.1 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_0601 -1.2 -2.0 hypothetical protein compare
Psest_2110 -1.2 -2.2 hypothetical protein compare
Psest_2815 -1.2 -5.8 S-formylglutathione hydrolase conserved
Psest_3045 -1.2 -1.7 Cold shock proteins compare
Psest_4393 -1.2 -4.0 Capsule polysaccharide export protein compare
Psest_3377 -1.2 -0.9 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_1226 -1.2 -2.9 hypothetical protein compare
Psest_1295 -1.2 -4.6 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_1012 -1.2 -3.1 Signal transduction histidine kinase compare
Psest_2591 -1.2 -2.1 3-isopropylmalate dehydratase, large subunit compare
Psest_0857 -1.2 -1.3 Membrane transporters of cations and cationic drugs compare
Psest_3306 -1.2 -3.9 conserved hypothetical integral membrane protein compare
Psest_3648 -1.2 -4.3 anthranilate phosphoribosyltransferase compare
Psest_3536 -1.2 -1.1 hypothetical protein compare
Psest_0417 -1.2 -2.1 Acyl-CoA dehydrogenases compare
Psest_3080 -1.1 -1.8 AraC-type DNA-binding domain-containing proteins compare
Psest_2848 -1.1 -2.5 Multisubunit Na+/H+ antiporter, MnhE subunit compare
Psest_2646 -1.1 -1.7 SOS regulatory protein LexA compare
Psest_3884 -1.1 -0.9 Signal transduction histidine kinase compare
Psest_3123 -1.1 -1.9 dihydroorotase, homodimeric type compare
Psest_0191 -1.1 -0.5 PAS domain S-box compare
Psest_2001 -1.1 -1.1 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_3458 -1.1 -2.4 hypothetical protein compare
Psest_2146 -1.1 -3.4 Transcriptional regulator compare
Psest_2748 -1.1 -1.3 Transcriptional regulator compare
Psest_0514 -1.1 -3.5 lytic murein transglycosylase B compare
Psest_0547 -1.1 -2.6 Urease accessory protein UreF compare
Psest_4003 -1.1 -3.2 TIGR00153 family protein compare
Psest_2726 -1.1 -1.0 Rhodanese-related sulfurtransferase compare
Psest_3816 -1.1 -0.9 DNA-directed RNA polymerase, omega subunit compare
Psest_1837 -1.1 -3.9 Endoglucanase compare
Psest_1305 -1.1 -2.6 Heat shock protein compare
Psest_0060 -1.0 -1.7 Predicted Fe-S protein compare
Psest_3697 -1.0 -1.1 Outer membrane lipoprotein carrier protein LolA. compare
Psest_0164 -1.0 -0.7 Glutaredoxin, GrxC family compare
Psest_4114 -1.0 -3.2 hypothetical protein compare
Psest_1870 -1.0 -1.0 Transcriptional regulators compare
Psest_2424 -1.0 -1.1 K+ transport systems, NAD-binding component compare
Psest_1486 -1.0 -2.2 hypothetical protein compare
Psest_2809 -1.0 -2.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psest_1103 -1.0 -2.8 GTP-binding protein YchF compare
Psest_1762 -1.0 -1.6 cytochrome c-type biogenesis protein CcmI compare
Psest_2778 -1.0 -2.4 Parvulin-like peptidyl-prolyl isomerase compare
Psest_0998 -1.0 -1.6 poly(A) polymerase compare
Psest_0970 -1.0 -1.6 hypothetical protein compare
Psest_3212 -1.0 -2.3 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_3307 -1.0 -3.8 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Psest_3735 -1.0 -1.4 uncharacterized domain 1 compare
Psest_1065 -1.0 -1.4 hypothetical protein compare
Psest_2855 -1.0 -0.9 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_2585 -1.0 -0.7 pseudouridylate synthase I compare
Psest_1631 -1.0 -1.6 Uncharacterized conserved small protein compare
Psest_0842 -1.0 -1.5 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_0515 -1.0 -1.9 rare lipoprotein A compare
Psest_1366 -1.0 -1.2 hypothetical protein compare
Psest_1774 -1.0 -1.4 Glutathione peroxidase compare
Psest_4363 -0.9 -3.8 ATPases involved in chromosome partitioning compare
Psest_2304 -0.9 -0.8 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_1510 -0.9 -2.3 Putative Zn-dependent protease, contains TPR repeats compare
Psest_0115 -0.9 -1.0 Predicted integral membrane protein compare
Psest_2104 -0.9 -0.9 IscR-regulated protein YhgI compare
Psest_2288 -0.9 -2.2 trigger factor compare
Psest_3088 -0.9 -2.0 Protein of unknown function (DUF2905). compare
Psest_0595 -0.9 -2.9 Uncharacterized conserved protein compare
Psest_3973 -0.9 -0.9 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_0174 -0.9 -2.7 Uncharacterized protein conserved in bacteria compare
Psest_0511 -0.9 -1.1 rRNA large subunit m3Psi methyltransferase RlmH compare
Psest_3304 -0.9 -2.6 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Psest_3305 -0.9 -4.3 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Psest_3384 -0.9 -3.8 glutamate 5-kinase compare
Psest_3435 -0.9 -2.9 hypothetical protein compare
Psest_0259 -0.9 -0.9 cell division ATP-binding protein FtsE compare
Psest_2122 -0.9 -0.8 Parvulin-like peptidyl-prolyl isomerase compare
Psest_2229 -0.9 -1.1 Uncharacterized protein conserved in bacteria compare
Psest_0969 -0.9 -1.0 transcription elongation factor GreA compare
Psest_3128 -0.9 -2.3 Protein-disulfide isomerase compare
Psest_0389 -0.9 -3.3 hypothetical protein compare
Psest_0592 -0.9 -2.0 hypothetical protein compare
Psest_3780 -0.9 -2.2 Transcriptional regulator compare
Psest_4088 -0.9 -2.0 Transcriptional regulators compare
Psest_1532 -0.9 -1.9 DNA recombination-dependent growth factor C compare
Psest_2885 -0.9 -1.4 Acyl carrier protein compare
Psest_0844 -0.8 -2.5 High-affinity Fe2+/Pb2+ permease compare
Psest_1741 -0.8 -1.2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_3056 -0.8 -1.9 hypothetical protein compare
Psest_1518 -0.8 -1.7 tRNA_Ser_CGA compare
Psest_0717 -0.8 -6.1 Protein of unknown function (DUF1631). compare
Psest_0278 -0.8 -3.6 hypothetical protein compare
Psest_1920 -0.8 -0.7 Uncharacterized protein conserved in bacteria compare
Psest_1736 -0.8 -1.8 Cu/Zn superoxide dismutase compare
Psest_2276 -0.8 -2.6 Aldehyde dehydrogenase (EC 1.2.1.3) (from data) compare
Psest_2983 -0.8 -1.5 hypothetical protein compare
Psest_4010 -0.8 -0.8 peroxiredoxin, OsmC subfamily compare
Psest_1472 -0.8 -4.1 Protein of unknown function (DUF3108). compare
Psest_2590 -0.8 -0.6 3-isopropylmalate dehydratase, small subunit compare
Psest_1354 -0.8 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_2511 -0.8 -3.0 molybdenum cofactor biosynthesis protein A, bacterial compare
Psest_3921 -0.8 -1.3 Uncharacterized protein conserved in bacteria compare
Psest_3180 -0.8 -4.2 Exonuclease I compare
Psest_2852 -0.8 -2.4 Outer membrane lipoprotein compare
Psest_2253 -0.8 -1.5 small redox-active disulfide protein 2 compare
Psest_0209 -0.8 -1.2 membrane protein AbrB duplication compare
Psest_1230 -0.8 -1.5 Uncharacterized protein conserved in bacteria compare
Psest_3803 -0.8 -0.8 DNA repair protein radc compare
Psest_4090 -0.8 -2.2 diaminobutyrate acetyltransferase compare
Psest_0533 -0.8 -1.7 Sel1 repeat. compare
Psest_2719 -0.8 -1.3 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family compare
Psest_2216 -0.8 -2.4 Acyl carrier protein compare
Psest_3356 -0.8 -2.3 D-fructose-responsive transcription factor compare
Psest_0240 -0.8 -2.8 hypothetical protein compare
Psest_1951 -0.8 -1.2 Uncharacterized protein conserved in bacteria compare
Psest_0508 -0.8 -3.3 gamma-glutamyl phosphate reductase compare
Psest_2772 -0.8 -2.3 MIP family channel proteins compare
Psest_1157 -0.8 -2.3 Predicted periplasmic lipoprotein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Furfuryl Alcohol in Pseudomonas stutzeri RCH2

For stress Furfuryl Alcohol across organisms