Experiment set17IT053 for Pseudomonas stutzeri RCH2

Compare to:

LB with Furfuryl Alcohol 0.2 vol%

200 most important genes:

  gene name fitness t score description  
Psest_2872 -3.4 -3.0 protein RecA compare
Psest_0398 -3.4 -7.8 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain compare
Psest_3960 -3.3 -2.0 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_0063 -2.9 -12.7 tryptophan synthase, beta subunit compare
Psest_0277 -2.9 -2.1 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Psest_0310 -2.8 -3.8 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Psest_0062 -2.8 -10.7 tryptophan synthase, alpha subunit compare
Psest_4406 -2.6 -1.5 hypothetical protein compare
Psest_0520 -2.6 -1.0 hypothetical protein compare
Psest_2530 -2.5 -4.8 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_1496 -2.4 -1.4 Holliday junction DNA helicase, RuvA subunit compare
Psest_1920 -2.4 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_0028 -2.4 -5.2 Coproporphyrinogen III oxidase compare
Psest_3546 -2.3 -1.4 Phosphatidylglycerophosphatase A and related proteins compare
Psest_1510 -2.3 -3.1 Putative Zn-dependent protease, contains TPR repeats compare
Psest_0498 -2.3 -2.1 ribosome small subunit-dependent GTPase A compare
Psest_2945 -2.2 -1.7 septum site-determining protein MinC compare
Psest_0191 -2.1 -1.1 PAS domain S-box compare
Psest_2855 -2.1 -1.4 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_1167 -2.0 -1.2 hypothetical protein compare
Psest_0558 -2.0 -1.0 urease, beta subunit compare
Psest_2946 -2.0 -3.2 septum site-determining protein MinD compare
Psest_2304 -2.0 -1.2 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_4219 -1.9 -3.2 DNA polymerase I compare
Psest_1013 -1.9 -3.3 phosphoribosylamine--glycine ligase compare
Psest_4098 -1.8 -3.2 Superfamily I DNA and RNA helicases compare
Psest_0902 -1.8 -4.2 Predicted transcriptional regulators compare
Psest_4191 -1.8 -2.8 Transcriptional regulator compare
Psest_3317 -1.7 -3.2 Phosphotransferase System HPr (HPr) Family compare
Psest_3767 -1.7 -4.1 tyrosine recombinase XerC compare
Psest_0514 -1.7 -5.5 lytic murein transglycosylase B compare
Psest_3377 -1.7 -1.2 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_0537 -1.7 -2.5 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
Psest_2579 -1.6 -5.4 amidophosphoribosyltransferase compare
Psest_1366 -1.6 -1.5 hypothetical protein compare
Psest_3129 -1.6 -1.3 tyrosine recombinase XerD compare
Psest_2545 -1.6 -2.7 recombination protein RecR compare
Psest_2001 -1.6 -1.1 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_3159 -1.6 -5.1 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_3100 -1.6 -1.1 RNA polymerase sigma factor RpoE compare
Psest_0013 -1.5 -4.7 Lauroyl/myristoyl acyltransferase compare
Psest_3178 -1.5 -2.8 formyltetrahydrofolate deformylase compare
Psest_3979 -1.5 -2.0 Fructose-2,6-bisphosphatase compare
Psest_0737 -1.5 -0.9 Cu(I)-responsive transcriptional regulator compare
Psest_3270 -1.5 -2.3 probable S-adenosylmethionine-dependent methyltransferase, YraL family compare
Psest_3367 -1.5 -1.5 translation initation factor SUI1, putative, prokaryotic compare
Psest_2527 -1.5 -5.9 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_3647 -1.5 -5.0 Indole-3-glycerol phosphate synthase compare
Psest_3998 -1.5 -5.2 glutamate--cysteine ligase compare
Psest_1532 -1.4 -4.1 DNA recombination-dependent growth factor C compare
Psest_2887 -1.4 -3.3 Uncharacterized protein conserved in bacteria compare
Psest_1661 -1.4 -1.6 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_2584 -1.4 -4.1 Phosphoribosylanthranilate isomerase compare
Psest_1860 -1.4 -1.9 Uncharacterized conserved protein compare
Psest_0442 -1.4 -3.1 ATPases of the AAA+ class compare
Psest_0842 -1.4 -1.7 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_3926 -1.4 -8.3 GTP-binding protein TypA/BipA compare
Psest_1574 -1.4 -3.1 phenazine biosynthesis protein PhzF family compare
Psest_3862 -1.4 -8.1 phosphoenolpyruvate-protein phosphotransferase compare
Psest_3047 -1.4 -0.9 methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain compare
Psest_1292 -1.3 -5.9 monothiol glutaredoxin, Grx4 family compare
Psest_4078 -1.3 -2.3 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_3301 -1.3 -3.0 Predicted transcriptional regulator, BolA superfamily compare
Psest_4280 -1.3 -3.7 ABC-type spermidine/putrescine transport system, permease component II compare
Psest_2581 -1.3 -1.7 Uncharacterized protein conserved in bacteria compare
Psest_2123 -1.3 -1.3 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) compare
Psest_0725 -1.3 -1.4 Negative regulator of beta-lactamase expression compare
Psest_3064 -1.2 -2.2 hypothetical protein compare
Psest_2531 -1.2 -7.1 cytochrome c oxidase accessory protein FixG compare
Psest_0515 -1.2 -2.7 rare lipoprotein A compare
Psest_3550 -1.2 -1.8 3,4-dihydroxy-2-butanone 4-phosphate synthase compare
Psest_1990 -1.2 -1.7 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs compare
Psest_1951 -1.2 -1.7 Uncharacterized protein conserved in bacteria compare
Psest_3247 -1.2 -1.3 Uncharacterized membrane protein compare
Psest_3128 -1.2 -2.1 Protein-disulfide isomerase compare
Psest_1804 -1.2 -1.7 Superfamily II DNA and RNA helicases compare
Psest_3351 -1.2 -4.6 peptide chain release factor 3 compare
Psest_0867 -1.2 -1.3 hypothetical protein compare
Psest_3648 -1.1 -3.7 anthranilate phosphoribosyltransferase compare
Psest_2637 -1.1 -1.1 putative methyltransferase, YaeB/AF_0241 family compare
Psest_2814 -1.1 -6.1 NADH:flavin oxidoreductases, Old Yellow Enzyme family conserved
Psest_0457 -1.1 -1.7 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_0296 -1.1 -5.0 glutathione synthetase, prokaryotic compare
Psest_0186 -1.1 -2.8 Protein-disulfide isomerase compare
Psest_4338 -1.1 -2.9 Fe2+-dicitrate sensor, membrane component compare
Psest_2067 -1.1 -0.9 ABC-type oligopeptide transport system, periplasmic component compare
Psest_3838 -1.1 -2.2 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol compare
Psest_0175 -1.1 -4.8 Xaa-Pro aminopeptidase compare
Psest_2712 -1.1 -3.7 Surface lipoprotein compare
Psest_1498 -1.1 -2.1 tol-pal system-associated acyl-CoA thioesterase compare
Psest_4335 -1.1 -1.4 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Psest_0311 -1.1 -3.5 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_0998 -1.0 -1.9 poly(A) polymerase compare
Psest_0243 -1.0 -1.0 hypothetical protein compare
Psest_2719 -1.0 -1.2 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family compare
Psest_0021 -1.0 -3.8 ribosomal RNA small subunit methyltransferase RsmB compare
Psest_1354 -1.0 -1.1 Uncharacterized protein conserved in bacteria compare
Psest_4274 -1.0 -1.7 hypothetical protein compare
Psest_4044 -1.0 -2.8 type I site-specific deoxyribonuclease, HsdR family compare
Psest_3123 -1.0 -1.8 dihydroorotase, homodimeric type compare
Psest_1295 -1.0 -3.8 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_3828 -1.0 -1.1 zinc-binding alcohol dehydrogenase family protein compare
Psest_2424 -1.0 -1.4 K+ transport systems, NAD-binding component compare
Psest_1681 -1.0 -2.0 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E compare
Psest_2622 -1.0 -2.1 TadE-like protein. compare
Psest_0511 -1.0 -1.3 rRNA large subunit m3Psi methyltransferase RlmH compare
Psest_2775 -1.0 -2.4 Glycerol-3-phosphate dehydrogenase compare
Psest_4363 -1.0 -4.0 ATPases involved in chromosome partitioning compare
Psest_0872 -1.0 -1.0 Helix-turn-helix. compare
Psest_1655 -1.0 -2.9 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_2651 -1.0 -2.0 DNA topoisomerase I, bacterial compare
Psest_3042 -1.0 -0.8 Nitrate reductase cytochrome c-type subunit compare
Psest_2146 -1.0 -2.9 Transcriptional regulator compare
Psest_2768 -1.0 -1.6 Kef-type K+ transport systems, predicted NAD-binding component compare
Psest_3458 -1.0 -2.3 hypothetical protein compare
Psest_0505 -1.0 -3.9 Putative effector of murein hydrolase compare
Psest_0113 -1.0 -2.2 Uncharacterized protein conserved in bacteria compare
Psest_3045 -1.0 -1.5 Cold shock proteins compare
Psest_3449 -0.9 -1.5 DJ-1 family protein compare
Psest_1947 -0.9 -0.6 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_1173 -0.9 -2.9 hypothetical protein compare
Psest_1783 -0.9 -1.9 Predicted transporter component compare
Psest_1986 -0.9 -1.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
Psest_4393 -0.9 -3.3 Capsule polysaccharide export protein compare
Psest_0259 -0.9 -1.0 cell division ATP-binding protein FtsE compare
Psest_0316 -0.9 -1.2 Cytochrome c556 compare
Psest_3230 -0.9 -3.4 Uncharacterized conserved protein compare
Psest_0449 -0.9 -5.3 Glutamine synthetase adenylyltransferase compare
Psest_2018 -0.9 -1.6 Uncharacterized conserved protein compare
Psest_3819 -0.9 -1.7 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_0822 -0.9 -2.2 Transcriptional regulators compare
Psest_1774 -0.9 -1.4 Glutathione peroxidase compare
Psest_0716 -0.9 -1.5 Protein of unknown function (DUF3094). compare
Psest_0349 -0.9 -4.1 DNA polymerase III, alpha subunit (gram-positive type) compare
Psest_1471 -0.9 -2.6 Predicted membrane protein compare
Psest_1610 -0.9 -2.4 hypothetical protein compare
Psest_3913 -0.9 -1.9 hypothetical protein compare
Psest_1516 -0.9 -1.4 Uncharacterized lipoprotein compare
Psest_1001 -0.9 -1.3 hypothetical protein compare
Psest_0718 -0.9 -2.0 nicotinate-nucleotide pyrophosphorylase compare
Psest_4128 -0.9 -1.2 Universal stress protein UspA and related nucleotide-binding proteins compare
Psest_3659 -0.9 -2.5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_2253 -0.8 -1.5 small redox-active disulfide protein 2 compare
Psest_2271 -0.8 -2.2 coenzyme PQQ biosynthesis protein PqqD compare
Psest_2953 -0.8 -1.0 Histone acetyltransferase compare
Psest_1814 -0.8 -6.0 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_1910 -0.8 -2.0 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Psest_4177 -0.8 -1.5 flagellar biosynthetic protein FliP compare
Psest_3649 -0.8 -3.8 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_3151 -0.8 -1.4 hypothetical protein compare
Psest_0083 -0.8 -1.1 Uncharacterized conserved protein compare
Psest_1656 -0.8 -1.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_3426 -0.8 -2.3 Uncharacterized protein conserved in bacteria compare
Psest_1888 -0.8 -0.7 Sua5/YciO/YrdC/YwlC family protein compare
Psest_1660 -0.8 -1.1 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_2981 -0.8 -1.1 sodium pump decarboxylases, gamma subunit compare
Psest_0521 -0.8 -3.7 lytic murein transglycosylase compare
Psest_2088 -0.8 -0.8 Uncharacterized protein conserved in bacteria compare
Psest_3790 -0.8 -4.5 Cytochrome c5 compare
Psest_0466 -0.8 -2.2 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_0765 -0.8 -2.7 hypothetical protein compare
Psest_2543 -0.8 -2.2 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Psest_3902 -0.8 -2.5 hypothetical protein compare
Psest_3650 -0.8 -5.1 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_3810 -0.8 -0.7 orotate phosphoribosyltransferase compare
Psest_2229 -0.8 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_2589 -0.8 -4.2 3-isopropylmalate dehydrogenase compare
Psest_1491 -0.8 -1.6 Cold shock proteins compare
Psest_1103 -0.8 -1.9 GTP-binding protein YchF compare
Psest_4051 -0.8 -1.7 molybdenum-pterin binding domain compare
Psest_3944 -0.8 -1.9 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Psest_3973 -0.8 -0.8 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_1218 -0.8 -2.4 Predicted endonuclease containing a URI domain compare
Psest_2870 -0.8 -3.9 TIGR00730 family protein compare
Psest_0691 -0.8 -4.0 ribonuclease R compare
Psest_3813 -0.8 -4.0 ribonuclease PH compare
Psest_2022 -0.8 -1.6 ADP-ribose pyrophosphatase compare
Psest_3531 -0.8 -0.6 Peptidase propeptide and YPEB domain. compare
Psest_2643 -0.8 -0.9 Beta-glucosidase-related glycosidases compare
Psest_4267 -0.7 -1.8 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_3766 -0.7 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_2285 -0.7 -2.0 ATP-dependent protease La compare
Psest_2525 -0.7 -2.4 cytochrome c oxidase, cbb3-type, subunit II compare
Psest_3322 -0.7 -5.1 TIGR02099 family protein compare
Psest_3177 -0.7 -0.7 hypothetical protein compare
Psest_2988 -0.7 -3.2 aspartate kinase, monofunctional class compare
Psest_0082 -0.7 -1.4 Domain of unknown function (DUF892). compare
Psest_0999 -0.7 -1.3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_3419 -0.7 -2.9 Predicted transcriptional regulators compare
Psest_1717 -0.7 -1.8 benzoate transporter compare
Psest_2138 -0.7 -1.8 RND family efflux transporter, MFP subunit compare
Psest_1313 -0.7 -1.0 Uncharacterized conserved small protein compare
Psest_4006 -0.7 -2.7 hypothetical protein compare
Psest_0164 -0.7 -0.5 Glutaredoxin, GrxC family compare
Psest_1704 -0.7 -0.8 Dehydrogenases (flavoproteins) compare
Psest_1111 -0.7 -1.3 Flp pilus assembly protein TadD, contains TPR repeats compare
Psest_0717 -0.7 -5.5 Protein of unknown function (DUF1631). compare
Psest_2277 -0.7 -1.7 coenzyme PQQ biosynthesis protein A compare
Psest_1679 -0.7 -0.8 ribonuclease, Rne/Rng family compare
Psest_0357 -0.7 -1.5 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare


Specific Phenotypes

For 1 genes in this experiment

For stress Furfuryl Alcohol in Pseudomonas stutzeri RCH2

For stress Furfuryl Alcohol across organisms