Experiment set17IT046 for Pseudomonas stutzeri RCH2

Compare to:

LB with Aluminum chloride hydrate 0.3 mM

200 most important genes:

  gene name fitness t score description  
Psest_2304 -5.4 -1.5 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_0845 -4.7 -1.3 hypothetical protein compare
Psest_2855 -4.5 -2.1 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_0708 -4.3 -2.3 outer membrane assembly lipoprotein YfiO compare
Psest_3462 -3.9 -7.4 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_2945 -3.4 -2.0 septum site-determining protein MinC compare
Psest_3463 -3.3 -9.1 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_3465 -3.3 -10.2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain conserved
Psest_3960 -3.2 -2.0 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_3128 -3.1 -5.9 Protein-disulfide isomerase compare
Psest_3351 -3.0 -4.9 peptide chain release factor 3 compare
Psest_0459 -2.9 -13.3 Predicted carbamoyl transferase, NodU family compare
Psest_3031 -2.7 -1.0 hypothetical protein compare
Psest_3322 -2.7 -15.9 TIGR02099 family protein compare
Psest_1516 -2.6 -2.5 Uncharacterized lipoprotein compare
Psest_1814 -2.5 -15.6 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_3301 -2.5 -2.2 Predicted transcriptional regulator, BolA superfamily compare
Psest_3270 -2.4 -2.5 probable S-adenosylmethionine-dependent methyltransferase, YraL family compare
Psest_1884 -2.3 -3.0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_3185 -2.3 -2.6 MoxR-like ATPases compare
Psest_1510 -2.3 -2.7 Putative Zn-dependent protease, contains TPR repeats compare
Psest_4191 -2.3 -4.0 Transcriptional regulator compare
Psest_0028 -2.3 -5.6 Coproporphyrinogen III oxidase compare
Psest_4219 -2.2 -3.2 DNA polymerase I compare
Psest_2946 -2.1 -2.9 septum site-determining protein MinD compare
Psest_1471 -2.1 -5.6 Predicted membrane protein compare
Psest_1656 -2.1 -2.3 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_2872 -2.1 -2.4 protein RecA compare
Psest_1661 -2.0 -1.9 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_0310 -2.0 -3.5 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Psest_2232 -2.0 -11.1 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_3550 -2.0 -3.0 3,4-dihydroxy-2-butanone 4-phosphate synthase compare
Psest_0078 -1.9 -1.4 hypothetical protein compare
Psest_3212 -1.9 -4.1 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_1837 -1.8 -7.3 Endoglucanase compare
Psest_0533 -1.8 -4.8 Sel1 repeat. compare
Psest_0487 -1.8 -3.7 Uncharacterized protein conserved in bacteria compare
Psest_1659 -1.7 -2.8 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_0843 -1.7 -9.2 hypothetical protein compare
Psest_1496 -1.7 -1.3 Holliday junction DNA helicase, RuvA subunit compare
Psest_4307 -1.7 -4.1 ABC-type Zn2+ transport system, periplasmic component/surface adhesin compare
Psest_0013 -1.7 -4.7 Lauroyl/myristoyl acyltransferase compare
Psest_3908 -1.7 -1.5 Cytochrome c553 compare
Psest_0844 -1.6 -3.6 High-affinity Fe2+/Pb2+ permease compare
Psest_4338 -1.6 -3.6 Fe2+-dicitrate sensor, membrane component compare
Psest_2067 -1.5 -1.1 ABC-type oligopeptide transport system, periplasmic component compare
Psest_2243 -1.5 -1.2 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_0442 -1.5 -2.5 ATPases of the AAA+ class compare
Psest_2775 -1.5 -3.4 Glycerol-3-phosphate dehydrogenase compare
Psest_3878 -1.5 -2.5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_2585 -1.5 -0.8 pseudouridylate synthase I compare
Psest_3938 -1.5 -3.0 Uncharacterized protein conserved in bacteria compare
Psest_3464 -1.5 -4.6 Signal transduction histidine kinase compare
Psest_0181 -1.5 -5.7 glycine cleavage system T protein compare
Psest_3188 -1.4 -3.0 hypothetical protein compare
Psest_4044 -1.4 -1.4 type I site-specific deoxyribonuclease, HsdR family compare
Psest_0993 -1.4 -6.5 Glucose-6-phosphate isomerase compare
Psest_0164 -1.4 -0.8 Glutaredoxin, GrxC family compare
Psest_0846 -1.4 -2.7 Uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Psest_1686 -1.4 -3.9 fatty acid/phospholipid synthesis protein PlsX compare
Psest_2646 -1.4 -1.6 SOS regulatory protein LexA compare
Psest_2285 -1.4 -3.4 ATP-dependent protease La compare
Psest_4177 -1.4 -1.6 flagellar biosynthetic protein FliP compare
Psest_1940 -1.4 -2.2 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain compare
Psest_3042 -1.4 -1.1 Nitrate reductase cytochrome c-type subunit compare
Psest_2756 -1.4 -1.3 hypothetical protein compare
Psest_2590 -1.3 -0.9 3-isopropylmalate dehydratase, small subunit compare
Psest_0998 -1.3 -2.1 poly(A) polymerase compare
Psest_3323 -1.3 -3.2 ribonuclease, Rne/Rng family compare
Psest_1679 -1.3 -1.2 ribonuclease, Rne/Rng family compare
Psest_1563 -1.3 -2.5 Protein of unknown function (DUF548). compare
Psest_1087 -1.3 -1.0 uncharacterized peroxidase-related enzyme compare
Psest_2566 -1.3 -0.9 Uncharacterized protein conserved in bacteria compare
Psest_2940 -1.3 -3.6 Predicted membrane protein compare
Psest_1535 -1.3 -2.5 FKBP-type peptidyl-prolyl cis-trans isomerases 1 compare
Psest_1179 -1.2 -1.6 2-hydroxy-3-oxopropionate reductase compare
Psest_1704 -1.2 -1.1 Dehydrogenases (flavoproteins) compare
Psest_3047 -1.2 -0.8 methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain compare
Psest_0725 -1.2 -1.5 Negative regulator of beta-lactamase expression compare
Psest_3177 -1.2 -1.4 hypothetical protein compare
Psest_1631 -1.2 -1.5 Uncharacterized conserved small protein compare
Psest_4124 -1.2 -3.1 hypothetical protein compare
Psest_2018 -1.2 -2.0 Uncharacterized conserved protein compare
Psest_3236 -1.2 -2.4 hypothetical protein compare
Psest_0691 -1.2 -6.7 ribonuclease R compare
Psest_3014 -1.2 -1.9 cob(I)alamin adenosyltransferase compare
Psest_3842 -1.2 -3.8 Transcriptional regulators compare
Psest_3367 -1.2 -1.2 translation initation factor SUI1, putative, prokaryotic compare
Psest_2579 -1.2 -4.3 amidophosphoribosyltransferase compare
Psest_0601 -1.2 -1.6 hypothetical protein compare
Psest_1813 -1.2 -6.6 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_0175 -1.2 -5.2 Xaa-Pro aminopeptidase compare
Psest_0516 -1.1 -5.2 D-alanyl-D-alanine carboxypeptidase compare
Psest_1999 -1.1 -0.9 pseudouridine synthase compare
Psest_3123 -1.1 -1.7 dihydroorotase, homodimeric type compare
Psest_3546 -1.1 -1.0 Phosphatidylglycerophosphatase A and related proteins compare
Psest_3531 -1.1 -1.2 Peptidase propeptide and YPEB domain. compare
Psest_4350 -1.1 -2.4 Transcriptional regulators of sugar metabolism compare
Psest_0510 -1.1 -3.3 iojap-like ribosome-associated protein compare
Psest_1082 -1.1 -1.6 Enoyl-CoA hydratase/carnithine racemase compare
Psest_0501 -1.1 -2.4 Predicted nucleoside-diphosphate-sugar epimerases compare
Psest_1822 -1.1 -3.7 Glycosyltransferases involved in cell wall biogenesis compare
Psest_1261 -1.1 -4.7 Uncharacterized protein conserved in bacteria compare
Psest_1259 -1.1 -3.8 23S rRNA m2A2503 methyltransferase compare
Psest_0309 -1.1 -0.9 RND family efflux transporter, MFP subunit compare
Psest_4298 -1.1 -0.8 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_0959 -1.0 -1.5 Uncharacterized protein conserved in bacteria compare
Psest_1421 -1.0 -2.1 Glutathione S-transferase compare
Psest_2001 -1.0 -1.1 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_2764 -1.0 -1.0 hypothetical protein compare
Psest_3181 -1.0 -2.6 Predicted membrane protein/domain compare
Psest_0260 -1.0 -0.8 Cell division protein compare
Psest_0355 -1.0 -1.3 Glycine cleavage system regulatory protein compare
Psest_1173 -1.0 -2.3 hypothetical protein compare
Psest_3159 -1.0 -3.7 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_2613 -1.0 -1.1 hypothetical protein compare
Psest_3231 -1.0 -1.4 hypothetical protein compare
Psest_1115 -1.0 -1.8 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_1313 -1.0 -1.3 Uncharacterized conserved small protein compare
Psest_0119 -1.0 -1.7 hypothetical protein compare
Psest_1655 -1.0 -2.7 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_3784 -1.0 -1.8 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_2724 -1.0 -2.0 hypothetical protein compare
Psest_1947 -1.0 -0.6 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_1428 -0.9 -2.1 Threonine dehydrogenase and related Zn-dependent dehydrogenases compare
Psest_0592 -0.9 -2.3 hypothetical protein compare
Psest_3697 -0.9 -1.8 Outer membrane lipoprotein carrier protein LolA. compare
Psest_0842 -0.9 -1.4 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_1809 -0.9 -5.0 Membrane protein involved in the export of O-antigen and teichoic acid compare
Psest_0461 -0.9 -3.8 Glycosyltransferase involved in LPS biosynthesis compare
Psest_1295 -0.9 -3.4 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_3239 -0.9 -1.9 hypothetical protein compare
Psest_3180 -0.9 -4.0 Exonuclease I compare
Psest_3100 -0.9 -1.4 RNA polymerase sigma factor RpoE compare
Psest_1098 -0.9 -5.2 Restriction endonuclease S subunits compare
Psest_1293 -0.9 -1.0 VanZ like family. compare
Psest_0334 -0.9 -1.7 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_2674 -0.9 -2.3 Protein chain release factor B compare
Psest_1657 -0.9 -1.0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_0133 -0.9 -1.0 type VI secretion protein, VC_A0107 family compare
Psest_1162 -0.9 -1.7 Spermidine synthase compare
Psest_4393 -0.9 -2.7 Capsule polysaccharide export protein compare
Psest_2017 -0.9 -1.8 Predicted acyltransferase compare
Psest_2748 -0.9 -1.1 Transcriptional regulator compare
Psest_1601 -0.9 -1.3 Signal transduction histidine kinase compare
Psest_1825 -0.9 -4.5 Predicted nucleoside-diphosphate sugar epimerases compare
Psest_1818 -0.9 -5.1 GDP-mannose 4,6-dehydratase compare
Psest_0212 -0.9 -1.4 exodeoxyribonuclease V, gamma subunit compare
Psest_1824 -0.9 -1.5 Sugar transferases involved in lipopolysaccharide synthesis compare
Psest_3172 -0.9 -3.0 cation diffusion facilitator family transporter compare
Psest_3752 -0.8 -3.2 hypothetical protein compare
Psest_0191 -0.8 -0.6 PAS domain S-box compare
Psest_2141 -0.8 -2.5 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_1366 -0.8 -0.8 hypothetical protein compare
Psest_2976 -0.8 -0.8 hypothetical protein compare
Psest_1498 -0.8 -1.5 tol-pal system-associated acyl-CoA thioesterase compare
Psest_1882 -0.8 -3.1 Signal transduction histidine kinase compare
Psest_1417 -0.8 -0.9 hypothetical protein compare
Psest_3488 -0.8 -2.3 Universal stress protein UspA and related nucleotide-binding proteins compare
Psest_0316 -0.8 -1.9 Cytochrome c556 compare
Psest_4051 -0.8 -1.2 molybdenum-pterin binding domain compare
Psest_0970 -0.8 -1.4 hypothetical protein compare
Psest_4053 -0.8 -2.9 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component compare
Psest_0645 -0.8 -5.3 Siderophore synthetase component compare
Psest_1479 -0.8 -2.0 NAD(P)H:quinone oxidoreductase, type IV compare
Psest_0660 -0.8 -1.7 Methyl-accepting chemotaxis protein compare
Psest_2517 -0.8 -2.3 hypothetical protein compare
Psest_1349 -0.8 -1.9 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_0426 -0.8 -2.0 Transposase and inactivated derivatives compare
Psest_2651 -0.8 -2.3 DNA topoisomerase I, bacterial compare
Psest_0867 -0.8 -1.1 hypothetical protein compare
Psest_3727 -0.8 -2.5 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases compare
Psest_2848 -0.8 -1.9 Multisubunit Na+/H+ antiporter, MnhE subunit compare
Psest_2628 -0.8 -1.7 Flp pilus assembly protein, protease CpaA compare
Psest_4095 -0.8 -1.8 Uncharacterized protein conserved in bacteria compare
Psest_1642 -0.8 -1.8 Uncharacterized protein conserved in bacteria compare
Psest_3961 -0.8 -2.5 NTP pyrophosphohydrolases including oxidative damage repair enzymes compare
Psest_0823 -0.8 -2.3 Transcriptional regulators compare
Psest_2445 -0.8 -3.4 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) compare
Psest_3215 -0.8 -2.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Psest_3965 -0.8 -2.9 hypothetical protein compare
Psest_0902 -0.7 -1.9 Predicted transcriptional regulators compare
Psest_0118 -0.7 -2.3 Predicted membrane protein compare
Psest_0789 -0.7 -1.7 hypothetical protein compare
Psest_3692 -0.7 -2.4 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases compare
Psest_3860 -0.7 -1.1 Predicted permeases compare
Psest_1371 -0.7 -1.2 hypothetical protein compare
Psest_2025 -0.7 -0.6 cold shock domain protein CspD compare
Psest_1653 -0.7 -4.7 transcription-repair coupling factor (mfd) compare
Psest_3222 -0.7 -1.2 Putative threonine efflux protein compare
Psest_2681 -0.7 -1.6 Uncharacterized protein conserved in bacteria compare
Psest_3983 -0.7 -2.2 Aldo/keto reductases, related to diketogulonate reductase compare
Psest_2520 -0.7 -1.1 Predicted SAM-dependent methyltransferase compare
Psest_1305 -0.7 -1.3 Heat shock protein compare
Psest_4098 -0.7 -1.9 Superfamily I DNA and RNA helicases compare
Psest_0457 -0.7 -1.3 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_1819 -0.7 -5.8 Nucleoside-diphosphate-sugar epimerases compare
Psest_1640 -0.7 -4.3 (p)ppGpp synthetase, RelA/SpoT family compare
Psest_4147 -0.7 -2.8 Flagellar basal body L-ring protein compare
Psest_2621 -0.7 -2.8 TadE-like protein. compare


Specific Phenotypes

For 4 genes in this experiment

For stress Aluminum chloride hydrate in Pseudomonas stutzeri RCH2

For stress Aluminum chloride hydrate across organisms