Experiment set17IT044 for Pseudomonas stutzeri RCH2

Compare to:

LB with Zinc sulfate heptahydrate 0.12 mM

200 most important genes:

  gene name fitness t score description  
Psest_0558 -4.6 -1.2 urease, beta subunit compare
Psest_2855 -3.5 -2.1 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_2759 -3.2 -9.9 Co/Zn/Cd efflux system component conserved
Psest_1660 -2.9 -2.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_3080 -2.9 -1.9 AraC-type DNA-binding domain-containing proteins compare
Psest_1656 -2.7 -2.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_1306 -2.7 -2.2 hypothetical protein compare
Psest_0498 -2.6 -1.7 ribosome small subunit-dependent GTPase A compare
Psest_0725 -2.4 -2.5 Negative regulator of beta-lactamase expression compare
Psest_0164 -2.3 -1.0 Glutaredoxin, GrxC family compare
Psest_3338 -2.3 -1.9 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_2651 -2.3 -4.5 DNA topoisomerase I, bacterial compare
Psest_0028 -2.2 -5.2 Coproporphyrinogen III oxidase compare
Psest_3351 -2.1 -6.2 peptide chain release factor 3 compare
Psest_2018 -2.1 -3.7 Uncharacterized conserved protein compare
Psest_2946 -2.1 -3.1 septum site-determining protein MinD compare
Psest_0958 -2.1 -6.4 Oligoketide cyclase/lipid transport protein compare
Psest_1824 -2.0 -3.4 Sugar transferases involved in lipopolysaccharide synthesis compare
Psest_3112 -2.0 -4.8 electron transport complex, RnfABCDGE type, A subunit compare
Psest_2579 -1.9 -5.7 amidophosphoribosyltransferase compare
Psest_0708 -1.9 -1.8 outer membrane assembly lipoprotein YfiO compare
Psest_1814 -1.9 -12.3 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_2229 -1.9 -2.2 Uncharacterized protein conserved in bacteria compare
Psest_3531 -1.9 -1.4 Peptidase propeptide and YPEB domain. compare
Psest_1661 -1.8 -1.8 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_0442 -1.8 -2.5 ATPases of the AAA+ class compare
Psest_0186 -1.8 -4.5 Protein-disulfide isomerase compare
Psest_4303 -1.8 -1.8 HEAT repeat. compare
Psest_0212 -1.8 -2.2 exodeoxyribonuclease V, gamma subunit compare
Psest_0533 -1.8 -4.0 Sel1 repeat. compare
Psest_2766 -1.8 -1.1 hypothetical protein compare
Psest_4274 -1.7 -2.6 hypothetical protein compare
Psest_2945 -1.7 -1.5 septum site-determining protein MinC compare
Psest_2872 -1.7 -1.9 protein RecA compare
Psest_1659 -1.7 -3.0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_1167 -1.6 -1.0 hypothetical protein compare
Psest_1999 -1.6 -1.0 pseudouridine synthase compare
Psest_2532 -1.6 -3.2 Uncharacterized protein conserved in bacteria compare
Psest_1056 -1.6 -2.3 2-isopropylmalate synthase, bacterial type compare
Psest_4191 -1.6 -3.0 Transcriptional regulator compare
Psest_3100 -1.6 -1.1 RNA polymerase sigma factor RpoE compare
Psest_3092 -1.5 -1.7 ribonuclease III, bacterial compare
Psest_1230 -1.5 -1.9 Uncharacterized protein conserved in bacteria compare
Psest_4335 -1.5 -1.3 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Psest_4243 -1.4 -1.7 type VI secretion lipoprotein, VC_A0113 family compare
Psest_3115 -1.4 -5.2 electron transport complex, RnfABCDGE type, D subunit compare
Psest_3014 -1.4 -1.2 cob(I)alamin adenosyltransferase compare
Psest_1774 -1.4 -1.6 Glutathione peroxidase compare
Psest_1655 -1.4 -3.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_0292 -1.3 -2.4 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase compare
Psest_2714 -1.3 -1.8 7-cyano-7-deazaguanine reductase compare
Psest_1013 -1.3 -2.9 phosphoribosylamine--glycine ligase compare
Psest_0678 -1.3 -3.3 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_1804 -1.3 -1.7 Superfamily II DNA and RNA helicases compare
Psest_2454 -1.3 -1.9 Rhodanese-related sulfurtransferase compare
Psest_0805 -1.3 -2.7 hypothetical protein compare
Psest_3339 -1.3 -4.4 Signal transduction histidine kinase compare
Psest_2001 -1.3 -1.2 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_1295 -1.3 -4.6 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_2365 -1.3 -4.4 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Psest_1496 -1.3 -1.1 Holliday junction DNA helicase, RuvA subunit compare
Psest_1158 -1.3 -6.8 Predicted thiol oxidoreductase compare
Psest_3002 -1.2 -1.5 Putative translation initiation inhibitor, yjgF family compare
Psest_0309 -1.2 -1.1 RND family efflux transporter, MFP subunit compare
Psest_0417 -1.2 -2.1 Acyl-CoA dehydrogenases compare
Psest_0520 -1.2 -0.6 hypothetical protein compare
Psest_3828 -1.2 -1.1 zinc-binding alcohol dehydrogenase family protein compare
Psest_3114 -1.2 -5.0 electron transport complex, RnfABCDGE type, C subunit compare
Psest_1012 -1.2 -3.6 Signal transduction histidine kinase compare
Psest_4044 -1.2 -2.5 type I site-specific deoxyribonuclease, HsdR family compare
Psest_2304 -1.2 -0.9 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_3045 -1.2 -1.6 Cold shock proteins compare
Psest_0655 -1.2 -1.4 Chemotaxis signal transduction protein compare
Psest_2561 -1.2 -0.8 hypothetical protein compare
Psest_3908 -1.2 -1.2 Cytochrome c553 compare
Psest_3031 -1.2 -0.6 hypothetical protein compare
Psest_3047 -1.2 -0.8 methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain compare
Psest_4103 -1.2 -1.1 AraC-type DNA-binding domain-containing proteins compare
Psest_2527 -1.1 -4.5 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_1388 -1.1 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_0060 -1.1 -1.8 Predicted Fe-S protein compare
Psest_1357 -1.1 -2.5 Uncharacterized protein conserved in bacteria compare
Psest_1279 -1.1 -2.5 hypothetical protein compare
Psest_1602 -1.1 -2.0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_2758 -1.1 -2.1 Predicted transcriptional regulators compare
Psest_3322 -1.1 -7.8 TIGR02099 family protein compare
Psest_0740 -1.1 -1.7 Transcriptional regulator compare
Psest_1919 -1.1 -1.5 Uncharacterized membrane protein (homolog of Drosophila rhomboid) compare
Psest_1486 -1.1 -1.8 hypothetical protein compare
Psest_3400 -1.1 -0.9 Copper resistance protein D. compare
Psest_1008 -1.1 -0.9 hypothetical protein compare
Psest_4311 -1.1 -3.6 Predicted metal-dependent hydrolase compare
Psest_3762 -1.1 -2.8 iron donor protein CyaY compare
Psest_1510 -1.1 -2.3 Putative Zn-dependent protease, contains TPR repeats compare
Psest_3467 -1.0 -4.3 PAP2 (acid phosphatase) superfamily protein compare
Psest_0823 -1.0 -2.2 Transcriptional regulators compare
Psest_1631 -1.0 -1.7 Uncharacterized conserved small protein compare
Psest_3938 -1.0 -2.4 Uncharacterized protein conserved in bacteria compare
Psest_2324 -1.0 -7.0 hypothetical protein compare
Psest_2775 -1.0 -2.5 Glycerol-3-phosphate dehydrogenase compare
Psest_1704 -1.0 -0.9 Dehydrogenases (flavoproteins) compare
Psest_0831 -1.0 -0.7 hypothetical protein compare
Psest_3177 -1.0 -1.5 hypothetical protein compare
Psest_1505 -1.0 -1.6 Organic radical activating enzymes compare
Psest_2325 -1.0 -5.1 alpha-L-glutamate ligase-related protein compare
Psest_0066 -1.0 -1.0 Protein of unknown function (DUF3060). compare
Psest_0853 -1.0 -2.9 6-phosphogluconolactonase compare
Psest_0257 -1.0 -2.1 Predicted Zn-dependent peptidases compare
Psest_3745 -1.0 -2.2 Uncharacterized enzyme of heme biosynthesis compare
Psest_2530 -1.0 -3.0 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_3226 -1.0 -0.8 Predicted membrane protein compare
Psest_3239 -1.0 -3.0 hypothetical protein compare
Psest_0515 -1.0 -2.9 rare lipoprotein A compare
Psest_3735 -1.0 -1.4 uncharacterized domain 1 compare
Psest_1904 -1.0 -3.1 Arabinose efflux permease compare
Psest_0334 -1.0 -1.9 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0175 -1.0 -3.8 Xaa-Pro aminopeptidase compare
Psest_2764 -0.9 -0.9 hypothetical protein compare
Psest_1491 -0.9 -1.4 Cold shock proteins compare
Psest_1022 -0.9 -4.8 Thiol:disulfide interchange protein compare
Psest_1870 -0.9 -0.7 Transcriptional regulators compare
Psest_0842 -0.9 -1.4 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_1947 -0.9 -0.6 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_2531 -0.9 -5.3 cytochrome c oxidase accessory protein FixG compare
Psest_3984 -0.9 -3.0 Methyl-accepting chemotaxis protein compare
Psest_4098 -0.9 -2.0 Superfamily I DNA and RNA helicases compare
Psest_0414 -0.9 -2.2 biotin biosynthesis protein BioC compare
Psest_3123 -0.9 -1.6 dihydroorotase, homodimeric type compare
Psest_1474 -0.9 -1.5 phosphoribosylaminoimidazole synthetase compare
Psest_3323 -0.9 -1.7 ribonuclease, Rne/Rng family compare
Psest_1663 -0.9 -1.6 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_1037 -0.9 -2.0 acetolactate synthase, small subunit compare
Psest_0485 -0.9 -2.2 clan AA aspartic protease, TIGR02281 family compare
Psest_0243 -0.9 -0.8 hypothetical protein compare
Psest_3692 -0.9 -2.3 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases compare
Psest_1524 -0.9 -1.9 Sel1 repeat. compare
Psest_1657 -0.9 -1.0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_3159 -0.9 -3.3 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_2104 -0.9 -0.8 IscR-regulated protein YhgI compare
Psest_2637 -0.8 -0.9 putative methyltransferase, YaeB/AF_0241 family compare
Psest_3507 -0.8 -2.3 FOG: EAL domain compare
Psest_3063 -0.8 -2.9 hypothetical protein compare
Psest_2323 -0.8 -4.5 Uncharacterized protein conserved in archaea compare
Psest_2278 -0.8 -1.8 coenzyme PQQ biosynthesis protein PqqD compare
Psest_3925 -0.8 -2.4 Methyl-accepting chemotaxis protein compare
Psest_1884 -0.8 -1.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0724 -0.8 -2.5 Deoxyinosine 3'endonuclease (endonuclease V) compare
Psest_3790 -0.8 -4.6 Cytochrome c5 compare
Psest_0542 -0.8 -3.8 AMP nucleosidase compare
Psest_2434 -0.8 -1.7 Protein of unknown function (DUF2892). compare
Psest_0843 -0.8 -4.1 hypothetical protein compare
Psest_1292 -0.8 -3.8 monothiol glutaredoxin, Grx4 family compare
Psest_1200 -0.8 -3.6 putative urate catabolism protein compare
Psest_0844 -0.8 -2.2 High-affinity Fe2+/Pb2+ permease compare
Psest_3447 -0.8 -1.1 Uncharacterized MobA-related protein compare
Psest_3853 -0.8 -1.5 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_0616 -0.8 -6.3 heavy metal efflux pump (cobalt-zinc-cadmium) compare
Psest_2057 -0.8 -3.4 Predicted secreted protein compare
Psest_2017 -0.8 -2.9 Predicted acyltransferase compare
Psest_3727 -0.8 -2.4 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases compare
Psest_3698 -0.8 -3.4 Predicted exporter compare
Psest_4393 -0.8 -2.8 Capsule polysaccharide export protein compare
Psest_0487 -0.8 -2.2 Uncharacterized protein conserved in bacteria compare
Psest_0614 -0.8 -5.5 Outer membrane protein compare
Psest_0782 -0.8 -2.0 Transcriptional regulator of aromatic amino acids metabolism compare
Psest_3064 -0.8 -1.2 hypothetical protein compare
Psest_1111 -0.8 -1.5 Flp pilus assembly protein TadD, contains TPR repeats compare
Psest_3176 -0.8 -3.2 Predicted ATPase compare
Psest_3767 -0.8 -1.5 tyrosine recombinase XerC compare
Psest_0505 -0.8 -1.8 Putative effector of murein hydrolase compare
Psest_3301 -0.8 -1.7 Predicted transcriptional regulator, BolA superfamily compare
Psest_2285 -0.8 -1.9 ATP-dependent protease La compare
Psest_1511 -0.8 -2.3 Predicted redox protein, regulator of disulfide bond formation compare
Psest_3228 -0.8 -4.2 Zn-dependent protease with chaperone function compare
Psest_1837 -0.8 -3.1 Endoglucanase compare
Psest_3012 -0.8 -2.5 cob(II)yrinic acid a,c-diamide reductase compare
Psest_3862 -0.8 -4.9 phosphoenolpyruvate-protein phosphotransferase compare
Psest_4151 -0.7 -1.5 Flagellar hook capping protein compare
Psest_0716 -0.7 -1.3 Protein of unknown function (DUF3094). compare
Psest_0400 -0.7 -1.9 Geranylgeranyl pyrophosphate synthase compare
Psest_2864 -0.7 -2.0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0759 -0.7 -0.8 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT). compare
Psest_2719 -0.7 -1.2 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family compare
Psest_3521 -0.7 -2.0 H+/gluconate symporter and related permeases compare
Psest_0218 -0.7 -1.3 Acyl-CoA hydrolase compare
Psest_4045 -0.7 -2.3 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen compare
Psest_3998 -0.7 -2.8 glutamate--cysteine ligase compare
Psest_2062 -0.7 -1.9 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_1115 -0.7 -0.9 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_0061 -0.7 -1.4 hypothetical protein compare
Psest_0225 -0.7 -1.0 Predicted permease, DMT superfamily compare
Psest_2044 -0.7 -2.1 ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system compare
Psest_3823 -0.7 -2.2 hypothetical protein compare
Psest_1249 -0.7 -2.7 serine O-acetyltransferase compare
Psest_3540 -0.7 -2.6 hypothetical protein compare
Psest_0398 -0.7 -2.5 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain compare
Psest_1920 -0.7 -0.6 Uncharacterized protein conserved in bacteria compare
Psest_1632 -0.7 -1.2 Predicted permeases compare
Psest_1647 -0.7 -2.1 Lhr-like helicases compare
Psest_3792 -0.7 -1.1 Putative translation initiation inhibitor, yjgF family compare


Specific Phenotypes

For 1 genes in this experiment

For stress Zinc sulfate heptahydrate in Pseudomonas stutzeri RCH2

For stress Zinc sulfate heptahydrate across organisms