Experiment set17IT041 for Pseudomonas stutzeri RCH2

Compare to:

LB with Thallium(I) acetate 0.08 mg/ml

200 most important genes:

  gene name fitness t score description  
Psest_0623 -4.5 -17.0 Arsenite efflux pump ACR3 and related permeases conserved
Psest_1809 -4.0 -14.8 Membrane protein involved in the export of O-antigen and teichoic acid compare
Psest_1814 -3.7 -20.9 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_3531 -3.6 -2.3 Peptidase propeptide and YPEB domain. compare
Psest_2590 -3.6 -1.3 3-isopropylmalate dehydratase, small subunit compare
Psest_1306 -3.4 -2.6 hypothetical protein compare
Psest_2945 -3.4 -2.0 septum site-determining protein MinC compare
Psest_2946 -2.7 -1.8 septum site-determining protein MinD compare
Psest_1510 -2.6 -2.5 Putative Zn-dependent protease, contains TPR repeats compare
Psest_2855 -2.5 -1.9 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_0515 -2.3 -4.1 rare lipoprotein A compare
Psest_0466 -2.3 -5.1 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_1999 -2.3 -1.3 pseudouridine synthase compare
Psest_3938 -2.2 -3.8 Uncharacterized protein conserved in bacteria compare
Psest_2240 -2.1 -2.4 hypothetical protein compare
Psest_2766 -2.1 -1.2 hypothetical protein compare
Psest_1660 -2.1 -2.4 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_3301 -2.1 -3.3 Predicted transcriptional regulator, BolA superfamily compare
Psest_0031 -2.1 -2.1 Uncharacterized conserved protein compare
Psest_0028 -2.0 -3.3 Coproporphyrinogen III oxidase compare
Psest_0516 -2.0 -8.8 D-alanyl-D-alanine carboxypeptidase compare
Psest_0442 -2.0 -1.9 ATPases of the AAA+ class compare
Psest_3129 -2.0 -1.4 tyrosine recombinase XerD compare
Psest_3565 -2.0 -1.5 hypothetical protein compare
Psest_0725 -2.0 -2.2 Negative regulator of beta-lactamase expression compare
Psest_2976 -1.9 -1.3 hypothetical protein compare
Psest_0958 -1.9 -6.9 Oligoketide cyclase/lipid transport protein compare
Psest_1230 -1.9 -2.0 Uncharacterized protein conserved in bacteria compare
Psest_3546 -1.9 -1.0 Phosphatidylglycerophosphatase A and related proteins compare
Psest_0164 -1.9 -1.0 Glutaredoxin, GrxC family compare
Psest_2744 -1.8 -1.6 Uncharacterized conserved protein compare
Psest_3960 -1.8 -1.3 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_2304 -1.7 -1.2 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_3270 -1.7 -2.4 probable S-adenosylmethionine-dependent methyltransferase, YraL family compare
Psest_1012 -1.7 -4.6 Signal transduction histidine kinase compare
Psest_4219 -1.7 -2.3 DNA polymerase I compare
Psest_4335 -1.6 -2.2 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Psest_1498 -1.6 -2.5 tol-pal system-associated acyl-CoA thioesterase compare
Psest_1659 -1.6 -2.7 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_1879 -1.5 -2.9 Trk-type K+ transport systems, membrane components compare
Psest_2901 -1.5 -1.8 hypothetical protein compare
Psest_3860 -1.5 -1.6 Predicted permeases compare
Psest_1013 -1.5 -3.1 phosphoribosylamine--glycine ligase compare
Psest_3338 -1.5 -1.6 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_1259 -1.5 -4.3 23S rRNA m2A2503 methyltransferase compare
Psest_1951 -1.5 -1.9 Uncharacterized protein conserved in bacteria compare
Psest_1656 -1.5 -1.9 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_0498 -1.5 -1.5 ribosome small subunit-dependent GTPase A compare
Psest_1305 -1.4 -3.1 Heat shock protein compare
Psest_4152 -1.4 -3.8 flagellar basal-body rod protein FlgC compare
Psest_3084 -1.4 -1.9 methyltransferase, putative compare
Psest_1471 -1.4 -4.9 Predicted membrane protein compare
Psest_4044 -1.4 -1.9 type I site-specific deoxyribonuclease, HsdR family compare
Psest_3100 -1.4 -1.3 RNA polymerase sigma factor RpoE compare
Psest_3322 -1.4 -10.0 TIGR02099 family protein compare
Psest_1657 -1.4 -1.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_0959 -1.4 -1.7 Uncharacterized protein conserved in bacteria compare
Psest_3458 -1.4 -2.3 hypothetical protein compare
Psest_3123 -1.4 -1.6 dihydroorotase, homodimeric type compare
Psest_3145 -1.3 -1.2 hypothetical protein compare
Psest_2104 -1.3 -0.9 IscR-regulated protein YhgI compare
Psest_1661 -1.3 -1.9 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_0013 -1.3 -4.3 Lauroyl/myristoyl acyltransferase compare
Psest_2017 -1.3 -3.3 Predicted acyltransferase compare
Psest_0697 -1.3 -2.7 ribosomal protein L9 compare
Psest_1920 -1.3 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_0514 -1.3 -4.0 lytic murein transglycosylase B compare
Psest_0520 -1.3 -0.6 hypothetical protein compare
Psest_2775 -1.2 -2.6 Glycerol-3-phosphate dehydrogenase compare
Psest_2907 -1.2 -0.7 Protein of unknown function (DUF3618). compare
Psest_0165 -1.2 -2.8 protein-export chaperone SecB compare
Psest_2899 -1.2 -1.3 hypothetical protein compare
Psest_1313 -1.2 -1.8 Uncharacterized conserved small protein compare
Psest_0508 -1.2 -4.5 gamma-glutamyl phosphate reductase compare
Psest_1905 -1.2 -2.8 Uncharacterized conserved protein, contains double-stranded beta-helix domain compare
Psest_2651 -1.2 -3.0 DNA topoisomerase I, bacterial compare
Psest_3377 -1.2 -0.9 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_2285 -1.2 -2.8 ATP-dependent protease La compare
Psest_1782 -1.2 -1.6 Predicted transcriptional regulators compare
Psest_1752 -1.2 -1.5 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB compare
Psest_3367 -1.2 -1.2 translation initation factor SUI1, putative, prokaryotic compare
Psest_2714 -1.2 -2.1 7-cyano-7-deazaguanine reductase compare
Psest_2288 -1.2 -2.2 trigger factor compare
Psest_4310 -1.1 -1.2 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_1655 -1.1 -3.2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_3351 -1.1 -4.4 peptide chain release factor 3 compare
Psest_0021 -1.1 -4.3 ribosomal RNA small subunit methyltransferase RsmB compare
Psest_1804 -1.1 -1.8 Superfamily II DNA and RNA helicases compare
Psest_2906 -1.1 -3.0 tRNA_Thr_CGT compare
Psest_3904 -1.1 -1.5 hypothetical protein compare
Psest_2579 -1.1 -4.1 amidophosphoribosyltransferase compare
Psest_3496 -1.1 -1.2 Predicted metal-binding protein compare
Psest_2591 -1.1 -1.5 3-isopropylmalate dehydratase, large subunit compare
Psest_2764 -1.0 -1.1 hypothetical protein compare
Psest_3850 -1.0 -0.6 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_3810 -1.0 -0.7 orotate phosphoribosyltransferase compare
Psest_3236 -1.0 -2.7 hypothetical protein compare
Psest_2110 -1.0 -2.7 hypothetical protein compare
Psest_1813 -1.0 -4.3 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_0103 -1.0 -2.6 triphosphoribosyl-dephospho-CoA synthase MdcB compare
Psest_0181 -1.0 -3.1 glycine cleavage system T protein compare
Psest_2594 -1.0 -2.5 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_0259 -1.0 -0.9 cell division ATP-binding protein FtsE compare
Psest_3955 -1.0 -3.2 Uncharacterized protein conserved in bacteria compare
Psest_2773 -1.0 -3.9 glycerol kinase compare
Psest_2470 -1.0 -1.3 hypothetical protein compare
Psest_4274 -1.0 -1.8 hypothetical protein compare
Psest_4063 -1.0 -2.7 sulfate ABC transporter, ATP-binding protein compare
Psest_1551 -1.0 -1.8 Integral membrane protein, interacts with FtsH compare
Psest_0172 -1.0 -3.0 Uncharacterized protein conserved in bacteria compare
Psest_1692 -1.0 -5.1 conserved hypothetical protein, YceG family compare
Psest_3177 -1.0 -1.4 hypothetical protein compare
Psest_1643 -1.0 -0.9 hypothetical protein compare
Psest_1947 -1.0 -0.6 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_4298 -1.0 -0.7 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_1733 -1.0 -1.6 flagellar biosynthetic protein FliQ compare
Psest_2543 -1.0 -2.7 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Psest_0489 -0.9 -0.6 phosphoserine phosphatase SerB compare
Psest_4315 -0.9 -1.7 ABC-type metal ion transport system, permease component compare
Psest_2483 -0.9 -2.9 Predicted redox protein, regulator of disulfide bond formation compare
Psest_0260 -0.9 -1.1 Cell division protein compare
Psest_1837 -0.9 -2.8 Endoglucanase compare
Psest_4201 -0.9 -0.9 general secretion pathway protein F compare
Psest_3749 -0.9 -6.1 Response regulator of the LytR/AlgR family compare
Psest_1472 -0.9 -4.5 Protein of unknown function (DUF3108). compare
Psest_3168 -0.9 -1.4 Molybdopterin converting factor, large subunit compare
Psest_3316 -0.9 -3.4 Predicted P-loop-containing kinase compare
Psest_0066 -0.9 -1.4 Protein of unknown function (DUF3060). compare
Psest_1783 -0.9 -1.8 Predicted transporter component compare
Psest_1563 -0.9 -2.1 Protein of unknown function (DUF548). compare
Psest_4043 -0.9 -1.1 Site-specific recombinases, DNA invertase Pin homologs compare
Psest_0622 -0.9 -1.8 Disulfide bond formation protein DsbB compare
Psest_0675 -0.9 -1.8 Predicted periplasmic lipoprotein compare
Psest_0083 -0.9 -1.4 Uncharacterized conserved protein compare
Psest_1907 -0.9 -1.0 hypothetical protein compare
Psest_4309 -0.9 -2.0 ABC-type Mn/Zn transport systems, ATPase component compare
Psest_2647 -0.9 -2.0 SOS-response cell division inhibitor, blocks FtsZ ring formation compare
Psest_3072 -0.9 -3.2 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit compare
Psest_4099 -0.9 -6.1 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Psest_4303 -0.8 -1.3 HEAT repeat. compare
Psest_2557 -0.8 -1.4 Protein of unknown function (DUF2474). compare
Psest_2513 -0.8 -2.6 Predicted membrane protein compare
Psest_1872 -0.8 -2.4 selT/selW/selH selenoprotein domain compare
Psest_2253 -0.8 -2.1 small redox-active disulfide protein 2 compare
Psest_2446 -0.8 -0.9 acetyl-CoA acetyltransferases compare
Psest_4078 -0.8 -1.3 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_0919 -0.8 -1.2 Permeases of the drug/metabolite transporter (DMT) superfamily compare
Psest_1763 -0.8 -1.7 hypothetical protein compare
Psest_3419 -0.8 -3.3 Predicted transcriptional regulators compare
Psest_2278 -0.8 -2.2 coenzyme PQQ biosynthesis protein PqqD compare
Psest_1647 -0.8 -1.5 Lhr-like helicases compare
Psest_1315 -0.8 -1.2 hypothetical protein compare
Psest_0257 -0.8 -1.0 Predicted Zn-dependent peptidases compare
Psest_4103 -0.8 -1.1 AraC-type DNA-binding domain-containing proteins compare
Psest_1475 -0.8 -1.6 Uncharacterized protein conserved in bacteria compare
Psest_2646 -0.8 -1.2 SOS regulatory protein LexA compare
Psest_3500 -0.8 -2.5 Acetyltransferases, including N-acetylases of ribosomal proteins compare
Psest_0998 -0.8 -1.5 poly(A) polymerase compare
Psest_2399 -0.8 -4.3 Short-chain dehydrogenases of various substrate specificities compare
Psest_2748 -0.8 -1.2 Transcriptional regulator compare
Psest_2421 -0.8 -2.4 formate dehydrogenase family accessory protein FdhD compare
Psest_2333 -0.8 -0.6 Protein of unknown function (DUF3359). compare
Psest_2872 -0.8 -1.3 protein RecA compare
Psest_3024 -0.8 -3.0 cytochrome d oxidase, subunit II (cydB) compare
Psest_0191 -0.8 -0.6 PAS domain S-box compare
Psest_1195 -0.8 -1.0 xanthine permease compare
Psest_3820 -0.8 -3.1 Uncharacterized protein conserved in bacteria compare
Psest_2502 -0.8 -2.2 Uncharacterized protein conserved in bacteria compare
Psest_1052 -0.8 -1.7 Uncharacterized protein involved in chromosome partitioning compare
Psest_0485 -0.8 -1.5 clan AA aspartic protease, TIGR02281 family compare
Psest_1762 -0.8 -1.1 cytochrome c-type biogenesis protein CcmI compare
Psest_2243 -0.8 -0.7 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_2957 -0.8 -2.0 competence protein ComEA helix-hairpin-helix repeat region compare
Psest_3070 -0.7 -0.9 3-oxoadipyl-CoA thiolase compare
Psest_1474 -0.7 -1.7 phosphoribosylaminoimidazole synthetase compare
Psest_0719 -0.7 -2.8 Uncharacterized protein conserved in bacteria compare
Psest_4241 -0.7 -1.7 hypothetical protein compare
Psest_3184 -0.7 -2.4 hypothetical protein compare
Psest_3761 -0.7 -1.3 Transcription elongation factor compare
Psest_1919 -0.7 -1.4 Uncharacterized membrane protein (homolog of Drosophila rhomboid) compare
Psest_0087 -0.7 -1.6 hypothetical protein compare
Psest_4187 -0.7 -2.8 Predicted permeases compare
Psest_2992 -0.7 -1.8 Uncharacterized conserved protein compare
Psest_4045 -0.7 -2.3 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen compare
Psest_1037 -0.7 -1.3 acetolactate synthase, small subunit compare
Psest_1631 -0.7 -1.3 Uncharacterized conserved small protein compare
Psest_0175 -0.7 -2.9 Xaa-Pro aminopeptidase compare
Psest_2613 -0.7 -0.9 hypothetical protein compare
Psest_1632 -0.7 -1.7 Predicted permeases compare
Psest_2585 -0.7 -0.4 pseudouridylate synthase I compare
Psest_3435 -0.7 -2.9 hypothetical protein compare
Psest_4191 -0.7 -1.7 Transcriptional regulator compare
Psest_0575 -0.7 -0.6 HrpA-like helicases compare
Psest_2725 -0.7 -1.5 hypothetical protein compare
Psest_1496 -0.7 -0.7 Holliday junction DNA helicase, RuvA subunit compare
Psest_1663 -0.7 -1.4 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_1543 -0.7 -2.6 Predicted transcription regulator, contains HTH domain (MarR family) compare
Psest_2768 -0.7 -1.5 Kef-type K+ transport systems, predicted NAD-binding component compare
Psest_0061 -0.7 -1.5 hypothetical protein compare
Psest_3497 -0.7 -2.1 Predicted metalloprotease compare


Specific Phenotypes

For 1 genes in this experiment

For stress Thallium(I) acetate in Pseudomonas stutzeri RCH2

For stress Thallium(I) acetate across organisms