Experiment set17IT034 for Sinorhizobium meliloti 1021

Compare to:

Methyl beta-D-glucopyranoside carbon source

200 most important genes:

  gene name fitness t score description  
SMc01843 -7.7 -7.5 5,10-methylenetetrahydrofolate reductase compare
SMc01054 -7.6 -5.2 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc02572 -7.5 -5.9 imidazole glycerol phosphate synthase subunit HisH compare
SMc00917 -7.2 -5.0 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02569 -7.1 -4.9 imidazole glycerol phosphate synthase subunit HisF compare
SMc00711 -7.0 -4.8 cyclohexadienyl dehydrogenase compare
SMc04405 -7.0 -8.3 3-isopropylmalate dehydrogenase compare
SMc01801 -6.9 -4.7 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02899 -6.8 -10.4 prephenate dehydratase compare
SMc03823 -6.8 -12.2 isopropylmalate isomerase large subunit compare
SMc03797 -6.7 -11.3 homoserine O-succinyltransferase compare
SMc02717 -6.7 -11.1 2-isopropylmalate synthase compare
SMc00640 -6.7 -6.5 phosphoserine aminotransferase compare
SMc00918 -6.6 -9.0 ATP phosphoribosyltransferase regulatory subunit compare
SMc02137 -6.6 -4.5 ornithine carbamoyltransferase compare
SMc01494 -6.5 -14.7 phosphoserine phosphatase compare
SMc04028 -6.5 -13.1 glutamate synthase compare
SMc00614 -6.4 -7.6 phosphoribosylglycinamide formyltransferase compare
SMc01726 -6.4 -5.7 acetylglutamate kinase compare
SMc04045 -6.3 -7.5 dihydroxy-acid dehydratase compare
SMc01431 -6.2 -12.0 acetolactate synthase 3 catalytic subunit compare
SMc01004 -6.1 -9.6 phosphoribosyl-AMP cyclohydrolase compare
SMc00993 -6.0 -8.2 phosphoribosylamine--glycine ligase compare
SMc03112 -5.9 -18.3 B12-dependent methionine synthase compare
SMc02570 -5.8 -7.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00495 -5.8 -6.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00615 -5.8 -12.2 phosphoribosylaminoimidazole synthetase compare
SMc02245 -5.7 -3.9 dihydroorotate dehydrogenase 2 compare
SMc03895 -5.7 -17.2 pyruvate carboxylase compare
SMc00092 -5.6 -12.0 phosphoadenosine phosphosulfate reductase compare
SMc02124 -5.6 -14.0 nitrite reductase compare
SMc00293 -5.5 -14.3 homoserine dehydrogenase compare
SMc00488 -5.5 -17.1 phosphoribosylformylglycinamidine synthase II compare
SMc02425 -5.4 -3.8 transcriptional regulator compare
SMc00091 -5.4 -12.6 sulfate adenylyltransferase compare
SMc00131 -5.4 -15.9 transcriptional regulator compare
SMc03777 -5.4 -8.2 gamma-glutamyl phosphate reductase compare
SMc00493 -5.3 -7.2 phosphoribosylformylglycinamidine synthase I compare
SMc00090 -5.2 -12.6 sulfate adenylyltransferase compare
SMc04258 -5.2 -13.8 ABC transporter for D-Cellobiose and D-Salicin, permease component 2 (from data) compare
SMc02123 -5.1 -5.2 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc03070 -5.1 -7.8 glucose-6-phosphate 1-dehydrogenase compare
SMc04026 -5.1 -7.5 glutamate synthase compare
SMc03776 -5.1 -3.5 gamma-glutamyl kinase compare
SMc04001 -5.0 -2.1 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc04253 -4.9 -17.2 oxidoreductase compare
SMc00494 -4.9 -2.8 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03161 -4.7 -13.2 oxidoreductase compare
SMc02755 -4.7 -4.5 S-adenosyl-L-homocysteine hydrolase compare
SMc04088 -4.6 -12.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02725 -4.6 -5.5 anthranilate synthase compare
SMc04256 -4.6 -13.2 ABC transporter for D-Cellobiose and D-Salicin, ATPase component (from data) compare
SMc04259 -4.5 -6.0 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMc02707 -4.5 -6.2 hypothetical protein compare
SMc00236 -4.5 -3.1 Indole-3-glycerol phosphate synthase compare
SMc04002 -4.5 -5.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02766 -4.4 -4.3 tryptophan synthase subunit beta compare
SMc04257 -4.3 -16.7 ABC transporter for D-Cellobiose and D-Salicin, permease component 1 (from data) compare
SMc02767 -4.3 -4.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02217 -4.3 -9.2 O-succinylhomoserine sulfhydrylase compare
SMc00554 -4.3 -9.4 amidophosphoribosyltransferase compare
SMc00017 -4.2 -2.4 homoserine kinase compare
SMc03162 -4.2 -13.3 3-ketoglucose dehydratase (from data) compare
SMc00235 -4.0 -2.8 anthranilate phosphoribosyltransferase compare
SMc01770 -3.9 -1.7 serine hydroxymethyltransferase compare
SMc02307 -3.9 -8.3 histidinol dehydrogenase compare
SMa1635 -3.9 -1.6 hypothetical protein compare
SM_b21175 -3.9 -5.3 phosphate uptake ABC transporter permease compare
SMc02166 -3.9 -9.9 dihydroorotase compare
SM_b21174 -3.8 -5.7 phosphate uptake ABC transporter permease compare
SMc03795 -3.8 -2.1 isopropylmalate isomerase small subunit compare
SMc04346 -3.7 -4.7 ketol-acid reductoisomerase compare
SMc02765 -3.6 -7.0 tryptophan synthase subunit alpha compare
SMc01053 -3.6 -5.0 siroheme synthase compare
SMc04255 -3.5 -13.9 beta-mannosidase compare
SMc01880 -3.5 -2.4 pantoate--beta-alanine ligase compare
SMc02165 -3.4 -4.0 orotate phosphoribosyltransferase compare
SM_b21177 -3.3 -7.7 phosphate uptake ABC transporter ATP-binding protein compare
SMc00876 -3.3 -7.3 ATP-binding MRP protein compare
SMc00641 -3.3 -4.5 D-3-phosphoglycerate dehydrogenase compare
SMc02138 -3.2 -3.7 acetylornithine transaminase compare
SMc00412 -3.2 -3.1 orotidine 5'-phosphate decarboxylase compare
SMc00334 -3.2 -2.1 cytidylate kinase compare
SMc01360 -3.1 -3.0 aspartate carbamoyltransferase catalytic subunit compare
SMc01881 -3.0 -4.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02246 -3.0 -1.2 hypothetical protein compare
SM_b21176 -3.0 -4.9 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00294 -2.9 -10.7 aminotransferase compare
SMc01361 -2.8 -3.3 dihydroorotase compare
SMa0882 -2.7 -2.2 hypothetical protein compare
SMc03826 -2.7 -1.8 argininosuccinate synthase compare
SMc03981 -2.6 -6.4 phosphoglycerate kinase compare
SMc00815 -2.6 -2.3 inosine 5'-monophosphate dehydrogenase compare
SMc04254 -2.5 -3.6 hypothetical protein compare
SMc00053 -2.5 -1.4 monovalent cation/H+ antiporter subunit C compare
SMc01207 -2.4 -2.8 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc02835 -2.3 -5.6 glucokinase compare
SMc02434 -2.3 -3.6 hypothetical protein compare
SMc03978 -2.2 -2.1 transketolase compare
SMc03979 -2.2 -2.8 glyceraldehyde-3-phosphate dehydrogenase compare
SMa1118 -2.2 -2.4 HspC2 heat shock protein compare
SMc00982 -2.1 -5.5 dioxygenase compare
SMc03763 -2.0 -1.3 cytosine-specific methyltransferase compare
SMc01430 -1.9 -6.1 acetolactate synthase 3 regulatory subunit compare
SMc02983 -1.8 -7.8 ornithine, DAP, or arginine decarboxylase compare
SMc02407 -1.8 -5.5 hypothetical protein compare
SMc02724 -1.8 -4.2 hypothetical protein compare
SM_b21084 -1.7 -3.4 hypothetical protein compare
SMc00450 -1.7 -2.2 protoheme IX farnesyltransferase compare
SMc03229 -1.7 -1.3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc00414 -1.6 -10.4 hypothetical protein compare
SMc00709 -1.6 -3.4 hypothetical protein compare
SMc01578 -1.6 -8.3 aspartate aminotransferase compare
SMc02055 -1.6 -1.8 phytoene synthase compare
SMc01124 -1.6 -5.3 PII uridylyl-transferase compare
SMc01569 -1.6 -0.9 carbamoyl phosphate synthase small subunit compare
SMc02172 -1.6 -8.1 transcriptional regulator compare
SMc03100 -1.5 -1.7 hypothetical protein compare
SMc01028 -1.5 -8.8 phosphopyruvate hydratase compare
SMc02777 -1.5 -4.2 transcriptional regulator compare
SMc00451 -1.5 -6.9 processing protease compare
SMc02838 -1.5 -5.8 phosphoglyceromutase compare
SMc01215 -1.5 -1.0 carbamoyl phosphate synthase large subunit compare
SMc00963 -1.5 -2.2 hypothetical protein compare
SMc02164 -1.5 -3.1 fructokinase compare
SMc00405 -1.5 -6.6 hypothetical protein compare
SMc00419 -1.5 -3.3 glutathione synthetase compare
SMc00295 -1.4 -1.1 hypothetical protein compare
SMc02753 -1.4 -1.3 PTS system transporter subunit IIA compare
SMa1052 -1.4 -1.8 hypothetical protein compare
SMc00010 -1.4 -1.5 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02140 -1.4 -1.5 phosphate regulon transcriptional regulatory protein compare
SMc03924 -1.4 -6.0 glycogen synthase compare
SMc03974 -1.3 -5.9 hypothetical protein compare
SM_b20294 -1.3 -1.3 transcriptional regulator NanR compare
SMc02574 -1.3 -2.5 imidazoleglycerol-phosphate dehydratase compare
SMa1365 -1.3 -1.5 ATP-binding protein compare
SMc04213 -1.3 -1.9 diacylglycerol kinase compare
SMc01441 -1.2 -5.2 membrane bound protease compare
SMc02641 -1.2 -4.0 UDP-glucose 6-dehydrogenase compare
SMc00189 -1.2 -5.2 cytochrome C1 protein compare
SMc01206 -1.2 -1.4 queuine tRNA-ribosyltransferase compare
SMc04000 -1.2 -0.9 hypothetical protein compare
SMc03835 -1.2 -2.9 2'-5' RNA ligase compare
SMc02141 -1.2 -2.7 phosphate transporter PhoU compare
SMc00072 -1.2 -1.9 peroxiredoxin protein compare
SMc03069 -1.2 -1.8 6-phosphogluconolactonase compare
SM_b20307 -1.1 -0.8 dihydroxyacetone kinase compare
SMc03849 -1.1 -0.7 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02564 -1.1 -2.4 LysM domain/BON superfamily protein compare
SMc00622 -1.1 -6.7 ribonuclease D protein compare
SMc01858 -1.1 -1.7 S-adenosyl-methyltransferase MraW compare
SMc02071 -1.1 -2.5 hydrolase glycosidase compare
SMc00511 -1.0 -3.2 D-ribulose-5-phosphate 3-epimerase compare
SMc01242 -1.0 -1.6 signal peptide protein compare
SMc00013 -1.0 -1.8 cytochrome C oxidase subunit III transmembrane protein compare
SMc02640 -1.0 -3.2 UDP-glucuronic acid epimerase compare
SM_b21132 -1.0 -3.4 sulfate ABC transporter permease compare
SM_b20148 -1.0 -3.1 transcriptional regulator compare
SMc00067 -1.0 -7.5 outer-membranne lipoprotein compare
SMc01501 -1.0 -1.9 mannitol 2-dehydrogenase compare
SMc01440 -1.0 -4.1 hydrolase serine protease transmembrane protein compare
SM_b20563 -1.0 -1.5 hypothetical protein compare
SMa1053 -1.0 -1.6 hypothetical protein compare
SMa1413 -1.0 -1.9 hypothetical protein compare
SMa0663 -1.0 -2.5 hypothetical protein compare
SMc01833 -1.0 -2.4 hypothetical protein compare
SMa1968 -1.0 -3.6 amidotransferase compare
SMc02058 -0.9 -1.5 YAJC protein compare
SMc02102 -0.9 -2.5 hypothetical protein compare
SMc00821 -0.9 -1.6 hypothetical protein compare
SMc04454 -0.9 -4.6 ABC transporter ATP-binding protein compare
SM_b21130 -0.9 -4.6 sulfate ABC transporter ATP-binding protein compare
SMc04391 -0.9 -1.5 3-ketoacyl-ACP reductase compare
SMa0169 -0.9 -2.9 methyltransferase compare
SMc04348 -0.9 -1.0 transcriptional regulator compare
SM_b21253 -0.9 -3.9 hypothetical protein compare
SMa0789 -0.9 -2.2 GntR family transcriptional regulator compare
SM_b21633 -0.9 -1.1 enoyl-CoA hydratase compare
SMc03068 -0.9 -4.8 phosphogluconate dehydratase compare
SMc00187 -0.9 -1.7 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc02121 -0.9 -1.5 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc01146 -0.9 -2.1 deoxyribonucleotide triphosphate pyrophosphatase compare
SMc03128 -0.9 -1.8 ABC transporter permease compare
SMc04327 -0.9 -1.1 hypothetical protein compare
SMc00513 -0.9 -3.0 amino acid-binding periplasmic protein compare
SMa5010 -0.9 -1.2 hypothetical protein compare
SMa0093 -0.9 -1.0 Branched-chain amino acid aminotransferase compare
SM_b21580 -0.8 -1.5 hypothetical protein compare
SM_b20773 -0.8 -2.3 GntR family transcriptional regulator compare
SMa5018 -0.8 -1.8 hypothetical protein compare
SM_b21102 -0.8 -4.8 transcriptional regulator compare
SMc00012 -0.8 -1.1 cytochrome C oxidase assembly protein compare
SMc01842 -0.8 -0.9 methyltransferase transcription regulator protein compare
SMc02863 -0.8 -2.8 recombination protein F compare
SM_b20089 -0.8 -2.0 hypothetical protein compare
SMc02460 -0.8 -4.3 hypothetical protein compare
SMa0717 -0.8 -4.7 hypothetical protein compare
SM_b21663 -0.8 -1.9 hypothetical protein compare
SMc02084 -0.8 -0.8 biopolymer transport transmembrane protein compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Methyl beta-D-glucopyranoside in Sinorhizobium meliloti 1021

For carbon source Methyl beta-D-glucopyranoside across organisms