Experiment set17IT033 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 12) - Cage6;Mouse1

200 most detrimental genes:

  gene name fitness t score description  
BT1876 +5.6 9.0 putative anti-sigma factor (NCBI ptt file) compare
BT1872 +5.0 6.0 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT2853 +4.9 2.1 hypothetical protein (NCBI ptt file) compare
BT1874 +4.9 8.0 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0414 +4.1 2.8 sulfate adenylyltransferase subunit 2 (NCBI ptt file) compare
BT2744 +4.0 20.5 acetyltransferase (NCBI ptt file) compare
BT0739 +4.0 3.6 hypothetical protein (NCBI ptt file) compare
BT1873 +3.6 4.0 endo-arabinase (NCBI ptt file) compare
BT2856 +3.6 6.0 hypothetical protein (NCBI ptt file) compare
BT3701 SusD +2.9 17.5 SusD, outer membrane protein (NCBI ptt file) compare
BT3133 +2.7 7.4 alpha-galactosidase (NCBI ptt file) compare
BT3705 SusR +2.6 17.0 regulatory protein SusR (NCBI ptt file) compare
BT1877 +2.5 3.8 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3702 SusC +2.4 17.0 SusC, outer membrane protein involved in starch binding (NCBI ptt file) compare
BT2743 +2.3 10.2 putative aminopeptidase (NCBI ptt file) compare
BT3703 SusB +2.3 12.5 alpha-glucosidase SusB (NCBI ptt file) compare
BT4672 +2.3 7.3 hypothetical protein (NCBI ptt file) compare
BT3700 SusE +2.3 11.6 SusE: Outer membrane amylopectin-binding protein (from data) compare
BT1875 +2.2 6.2 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT2857 +2.2 4.9 hypothetical protein (NCBI ptt file) compare
BT4123 +2.0 13.6 exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) compare
BT3974 +2.0 10.5 conserved hypothetical protein (NCBI ptt file) compare
BT2854 +1.9 5.1 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT1071 +1.8 3.0 hypothetical protein (NCBI ptt file) compare
BT3832 +1.8 4.6 conserved hypothetical protein (NCBI ptt file) compare
BT2760 +1.8 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT0178 +1.8 2.4 hypothetical protein (NCBI ptt file) compare
BT3262 +1.7 5.9 hypothetical protein (NCBI ptt file) compare
BT0316 +1.7 9.3 putative hemin receptor (NCBI ptt file) compare
BT3211 +1.6 2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1197 +1.5 3.6 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3738 +1.4 11.6 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) compare
BT1520 +1.4 1.8 putative transcriptional regulator (NCBI ptt file) compare
BT1200 +1.4 5.1 hypothetical protein (NCBI ptt file) compare
BT0417 +1.4 3.2 hypothetical protein (NCBI ptt file) compare
BT2858 +1.4 4.8 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0932 +1.4 3.1 hypothetical protein (NCBI ptt file) compare
BT0215 +1.4 1.6 iron uptake regulatory protein (NCBI ptt file) compare
BT3132 +1.4 3.9 sialic acid-specific 9-O-acetylesterase (NCBI ptt file) compare
BT4673 +1.4 9.8 two-component system sensor histidine kinase (NCBI ptt file) compare
BT0654 +1.4 6.3 two-component sensor histidine kinase (NCBI ptt file) compare
BT3747 +1.4 5.4 hypothetical protein (NCBI ptt file) compare
BT4670 +1.3 7.7 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT4671 +1.3 10.2 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT3355 +1.3 0.6 putative auxin-regulated protein (NCBI ptt file) compare
BT0582 +1.3 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0799 +1.3 1.9 hypothetical protein (NCBI ptt file) compare
BT3970 +1.3 4.7 hypothetical protein (NCBI ptt file) compare
BT0848 +1.2 3.1 hypothetical protein (NCBI ptt file) compare
BT0584 +1.2 3.5 putative outer membrane protein (NCBI ptt file) compare
BT3213 +1.2 1.4 tRNA pseudouridine synthase B (NCBI ptt file) compare
BT1561 +1.2 1.2 hypothetical protein (NCBI ptt file) compare
BT0513 +1.2 4.5 hypothetical protein (NCBI ptt file) compare
BT2784 +1.2 2.6 hypothetical protein (NCBI ptt file) compare
BT3368 +1.2 1.2 putative glycosyltransferase (NCBI ptt file) compare
BT4668 +1.2 3.3 arabinogalactan endo-1,4-beta-galactosidase (NCBI ptt file) compare
BT1679 +1.2 2.2 hypothetical protein (NCBI ptt file) compare
BT1462 +1.2 2.4 hypothetical protein (NCBI ptt file) compare
BT0067 +1.2 1.5 hypothetical protein (NCBI ptt file) compare
BT4693 +1.2 1.9 cation efflux system protein (NCBI ptt file) compare
BT0749 +1.2 5.9 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT4198 +1.2 3.4 conserved hypothetical protein (NCBI ptt file) compare
BT2852 +1.2 4.0 putative beta-xylosidase (NCBI ptt file) compare
BT1704 +1.2 1.3 hypothetical protein (NCBI ptt file) compare
BT3971 +1.2 3.2 glutathione peroxidase (NCBI ptt file) compare
BT2046 +1.2 0.7 putative cardiolipin synthetase (NCBI ptt file) compare
BT3899 +1.1 4.7 transcriptional regulator (NCBI ptt file) compare
BT1895 +1.1 3.0 hypothetical protein (NCBI ptt file) compare
BT1201 +1.1 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0902 +1.1 1.4 hypothetical protein (NCBI ptt file) compare
BT2082 +1.1 1.8 hypothetical protein (NCBI ptt file) compare
BT0081 +1.1 3.0 hypothetical protein (NCBI ptt file) compare
BT4773 +1.1 2.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0402 +1.1 2.3 hypothetical protein (NCBI ptt file) compare
BT4675 +1.1 3.9 heparin lyase I precursor (NCBI ptt file) compare
BT0540 +1.1 3.4 putative exopolyphosphatase (NCBI ptt file) compare
BT1532 +1.1 5.1 ABC transporter permease (NCBI ptt file) compare
BT3691 +1.0 2.7 conserved hypothetical protein, putative membrane protein (NCBI ptt file) compare
BT0079 +1.0 2.4 putative anti-restriction protein (NCBI ptt file) compare
BT1298 +1.0 2.8 V-type ATP synthase subunit B (NCBI ptt file) compare
BT1740 +1.0 2.6 hypothetical protein (NCBI ptt file) compare
BT0472 +1.0 2.5 putative acyltransferase in colanic acid biosynthesis (NCBI ptt file) compare
BT3690 +1.0 3.5 putative membrane protein (NCBI ptt file) compare
BT2600 +1.0 2.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2039 +1.0 2.7 cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) compare
BT3806 +1.0 0.9 conserved hypothetical protein (NCBI ptt file) compare
BT1421 +1.0 2.9 hypothetical protein (NCBI ptt file) compare
BT3736 +1.0 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT2546 +1.0 3.0 transcriptional regulator (NCBI ptt file) compare
BT1868 +1.0 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1165 +1.0 4.0 hypothetical protein (NCBI ptt file) compare
BT4561 +1.0 2.1 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT3772 +1.0 2.0 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT1925 +1.0 2.8 hypothetical protein (NCBI ptt file) compare
BT4187 +1.0 5.8 exo-alpha-D-galacturonosidase for catabolism of rhamnogalacturonan I and polygalacturonate (from data) compare
BT0225 +1.0 3.0 hypothetical protein (NCBI ptt file) compare
BT1058 +1.0 6.5 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1262 +0.9 1.2 putative transcriptional regulator (NCBI ptt file) compare
BT0842 +0.9 2.0 hypothetical protein (NCBI ptt file) compare
BT4361 +0.9 3.8 hypothetical protein (NCBI ptt file) compare
BT0671 +0.9 1.7 outer membrane protein TolC, putative (NCBI ptt file) compare
BT0241 +0.9 1.5 hypothetical protein (NCBI ptt file) compare
BT0032 +0.9 3.1 hypothetical protein (NCBI ptt file) compare
BT1516 +0.9 2.7 replicative DNA helicase (NCBI ptt file) compare
BT1719 +0.9 1.8 sulfopyruvate decarboxylase subunit beta (NCBI ptt file) compare
BT4544 +0.9 1.6 transposase (NCBI ptt file) compare
BT3937 +0.9 2.6 TPR-domain containing protein (NCBI ptt file) compare
BT1080 +0.9 1.7 hypothetical protein (NCBI ptt file) compare
BT3270 +0.9 4.0 putative anti-sigma factor (NCBI ptt file) compare
BT4611 +0.9 2.7 putative bacterioferritin co-migratory protein (NCBI ptt file) compare
BT0609 +0.9 2.8 glycosyltransferase (NCBI ptt file) compare
BT3046 +0.9 7.3 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT3251 +0.9 3.9 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT2471 +0.9 2.7 hypothetical protein (NCBI ptt file) compare
BT1088 +0.9 1.5 hypothetical protein (NCBI ptt file) compare
BT1920 +0.9 2.9 hypothetical protein (NCBI ptt file) compare
BT0758 +0.9 0.8 acetyltransferase (NCBI ptt file) compare
BT1126 +0.9 1.5 mobilization protein BmgA (NCBI ptt file) compare
BT1612 +0.9 2.7 hypothetical protein (NCBI ptt file) compare
BT0522 +0.9 2.5 hypothetical protein (NCBI ptt file) compare
BT1958 +0.9 1.3 hypothetical protein (NCBI ptt file) compare
BT0084 +0.9 2.2 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT2072 +0.9 4.0 aconitate hydratase (NCBI ptt file) compare
BT0469 +0.9 3.5 hypothetical protein (NCBI ptt file) compare
BT1370 +0.9 2.3 NAD dependent nucleotide-diphosphate-sugar epimerase (NCBI ptt file) compare
BT2282 +0.9 2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1107 +0.9 2.4 ferritin A (NCBI ptt file) compare
BT3840 +0.9 3.2 putative RNA-binding protein rbpA (NCBI ptt file) compare
BT1535 +0.9 2.2 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1059 +0.8 3.5 putative UDP-glucose 4-epimerase (NCBI ptt file) compare
BT0783 +0.8 1.2 hypothetical protein (NCBI ptt file) compare
BT1596 +0.8 3.1 putative sulfatase yidJ (NCBI ptt file) compare
BT0585 +0.8 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1207 +0.8 2.9 glycerate dehydrogenase (NADH-dependent) (NCBI ptt file) compare
BT4642 +0.8 3.2 conserved hypothetical protein (NCBI ptt file) compare
BT0978 +0.8 2.9 ECF-type sigma factor (NCBI ptt file) compare
BT1235 +0.8 3.5 AraC-type transcription regulator (NCBI ptt file) compare
BT3197 +0.8 0.9 hypothetical protein (NCBI ptt file) compare
BT1130 +0.8 1.9 hypothetical protein (NCBI ptt file) compare
BT1505 +0.8 2.0 hypothetical protein (NCBI ptt file) compare
BT4250 +0.8 4.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1496 +0.8 2.3 hemolysin-related protein, containing CBS domain (NCBI ptt file) compare
BT0337 +0.8 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT0878 +0.8 1.4 ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT3047 +0.8 5.8 hypothetical protein (NCBI ptt file) compare
BT3255 +0.8 3.0 putative N6-adenine-specific DNA methylase (NCBI ptt file) compare
BT0073 +0.8 2.5 putative ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT4452 +0.8 1.5 conserved hypothetical protein (NCBI ptt file) compare
p5482_03 +0.8 3.6 hypothetical protein (NCBI) compare
BT1544 +0.8 2.6 NADH pyrophosphatase, MutT family hydrolase (NCBI ptt file) compare
BT3286 +0.8 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT1805 +0.8 1.2 electron transfer flavoprotein alpha-subunit (NCBI ptt file) compare
BT1104 +0.8 1.2 small heat shock protein (NCBI ptt file) compare
BT3911 +0.8 2.0 malate dehydrogenase (NCBI ptt file) compare
BT0856 +0.8 2.7 two-component system response regulator (NCBI ptt file) compare
BT0797 +0.8 1.5 transcriptional regulator, ArsR family (NCBI ptt file) compare
BT0961 +0.8 1.9 conserved hypothetical protein (NCBI ptt file) compare
BT3783 +0.8 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0411 +0.8 2.6 CysQ, sulfite synthesis pathway protein (NCBI ptt file) compare
BT2472 +0.8 3.1 hypothetical protein (NCBI ptt file) compare
BT3730 +0.8 1.5 putative regulatory protein (NCBI ptt file) compare
BT2188 +0.8 2.9 putative oxidoreductase (NCBI ptt file) compare
BT1806 +0.8 3.2 acyl-CoA dehydrogenase (NCBI ptt file) compare
BT1240 +0.8 2.4 conserved hypothetical protein (NCBI ptt file) compare
BT2855 +0.8 4.1 beta-mannosidase precursor (NCBI ptt file) compare
BT2187 +0.8 3.6 putative cAMP-binding domain-containing regulatory protein (NCBI ptt file) compare
BT1656 +0.8 1.3 putative transcriptional regulator (NCBI ptt file) compare
BT3049 +0.8 6.2 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) compare
BT0723 +0.8 1.2 hypothetical protein (NCBI ptt file) compare
BT0007 +0.8 1.4 hypothetical protein (NCBI ptt file) compare
BT2996 +0.8 2.4 hypothetical protein (NCBI ptt file) compare
BT0524 +0.8 3.3 putative two-component system response regulator (NCBI ptt file) compare
BT3045 +0.8 5.5 hypothetical protein (NCBI ptt file) compare
BT0696 +0.8 2.4 putative membrane protein (NCBI ptt file) compare
BT2295 +0.8 1.8 hypothetical protein (NCBI ptt file) compare
BT0528 +0.8 2.3 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT2314 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT2115 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT0849 +0.7 2.8 hypothetical protein (NCBI ptt file) compare
BT1822 +0.7 2.5 pyruvate dehydrogenase [cytochrome] (NCBI ptt file) compare
BT0240 +0.7 3.2 conserved hypothetical protein (NCBI ptt file) compare
BT1504 +0.7 2.0 hypothetical protein (NCBI ptt file) compare
BT1518 +0.7 2.2 hypothetical protein (NCBI ptt file) compare
BT4687 +0.7 2.4 hypothetical protein (NCBI ptt file) compare
BT1321 +0.7 2.0 putative phosphate transport ATP-binding protein (NCBI ptt file) compare
BT0264 +0.7 3.1 conserved hypothetical protein (NCBI ptt file) compare
BT4713 +0.7 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT3379 +0.7 3.5 putative glycosyltransferase (NCBI ptt file) compare
BT4397 +0.7 3.4 xylose/H+ symporter (NCBI ptt file) compare
BT2142 +0.7 0.8 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT1511 +0.7 2.4 outer membrane protein OmpA (NCBI ptt file) compare
BT4455 +0.7 1.2 oxidoreductase, putative glycolate oxidase (NCBI ptt file) compare
BT0327 +0.7 1.6 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) (NCBI ptt file) compare
BT4607 +0.7 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1173 +0.7 1.4 hypothetical protein (NCBI ptt file) compare
BT0599 +0.7 2.7 UDP-glucose 6-dehydrogenase (NCBI ptt file) compare
BT0232 +0.7 1.8 putative protein involved in transposition (NCBI ptt file) compare
BT1185 +0.7 5.5 OmpA-related protein (NCBI ptt file) compare
BT2321 +0.7 1.5 putative integrase (NCBI ptt file) compare
BT0692 +0.7 1.4 putative calcineurin superfamily phosphohydrolase (NCBI ptt file) compare


Specific Phenotypes

For 2 genes in this experiment