Experiment set17IT031 for Sinorhizobium meliloti 1021

Compare to:

Xylobiose carbon source

200 most important genes:

  gene name fitness t score description  
SMc01726 -8.5 -5.9 acetylglutamate kinase compare
SMc00495 -8.1 -5.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01843 -8.0 -7.8 5,10-methylenetetrahydrofolate reductase compare
SMc02899 -7.9 -9.4 prephenate dehydratase compare
SMc01054 -7.8 -5.4 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc02572 -7.8 -6.0 imidazole glycerol phosphate synthase subunit HisH compare
SMc03797 -7.6 -9.1 homoserine O-succinyltransferase compare
SMc00917 -7.4 -5.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02717 -7.4 -8.8 2-isopropylmalate synthase compare
SMc00640 -7.3 -5.0 phosphoserine aminotransferase compare
SMc02123 -7.2 -4.0 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc00711 -7.2 -4.9 cyclohexadienyl dehydrogenase compare
SMc01801 -7.1 -4.8 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc03823 -7.0 -12.6 isopropylmalate isomerase large subunit compare
SMc02217 -6.9 -4.8 O-succinylhomoserine sulfhydrylase compare
SMc04026 -6.9 -9.4 glutamate synthase compare
SMc00293 -6.8 -13.9 homoserine dehydrogenase compare
SMc01494 -6.8 -12.5 phosphoserine phosphatase compare
SMc04405 -6.7 -9.2 3-isopropylmalate dehydrogenase compare
SMc02137 -6.7 -4.6 ornithine carbamoyltransferase compare
SMc00993 -6.6 -9.1 phosphoribosylamine--glycine ligase compare
SMc00494 -6.6 -2.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc01431 -6.6 -11.0 acetolactate synthase 3 catalytic subunit compare
SMc01004 -6.6 -10.7 phosphoribosyl-AMP cyclohydrolase compare
SMc04045 -6.5 -8.9 dihydroxy-acid dehydratase compare
SMc04028 -6.5 -14.6 glutamate synthase compare
SMc00488 -6.4 -20.2 phosphoribosylformylglycinamidine synthase II compare
SMc02569 -6.4 -6.2 imidazole glycerol phosphate synthase subunit HisF compare
SMc00614 -6.3 -8.0 phosphoribosylglycinamide formyltransferase compare
SMc00493 -6.3 -6.1 phosphoribosylformylglycinamidine synthase I compare
SMc00090 -6.3 -12.7 sulfate adenylyltransferase compare
SMc03895 -6.2 -16.5 pyruvate carboxylase compare
SMc03777 -6.1 -7.2 gamma-glutamyl phosphate reductase compare
SMc00131 -6.0 -15.6 transcriptional regulator compare
SMc03112 -6.0 -17.9 B12-dependent methionine synthase compare
SMc00554 -5.8 -8.0 amidophosphoribosyltransferase compare
SMc02124 -5.7 -15.6 nitrite reductase compare
SMc00918 -5.7 -10.9 ATP phosphoribosyltransferase regulatory subunit compare
SMc00092 -5.5 -12.5 phosphoadenosine phosphosulfate reductase compare
SMc00615 -5.5 -10.5 phosphoribosylaminoimidazole synthetase compare
SMc03776 -5.2 -3.6 gamma-glutamyl kinase compare
SMc02471 -5.2 -16.1 periplasmic binding ABC transporter protein conserved
SMc00091 -5.1 -14.0 sulfate adenylyltransferase compare
SMc04001 -5.1 -2.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02468 -5.1 -12.8 hypothetical protein conserved
SMc02425 -5.1 -4.9 transcriptional regulator compare
SM_b21177 -5.0 -9.0 phosphate uptake ABC transporter ATP-binding protein compare
SMc02245 -4.9 -4.7 dihydroorotate dehydrogenase 2 compare
SMc04088 -4.8 -7.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02472 -4.7 -10.5 ABC transporter permease conserved
SMc02766 -4.7 -4.6 tryptophan synthase subunit beta compare
SMc02570 -4.7 -4.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03070 -4.6 -7.6 glucose-6-phosphate 1-dehydrogenase compare
SMc02725 -4.4 -7.4 anthranilate synthase compare
SMc00641 -4.4 -7.2 D-3-phosphoglycerate dehydrogenase compare
SMc02469 -4.4 -13.9 oxidoreductase conserved
SMc01053 -4.4 -5.0 siroheme synthase compare
SMc02767 -4.4 -4.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02307 -4.3 -9.6 histidinol dehydrogenase compare
SMc00876 -4.3 -7.6 ATP-binding MRP protein compare
SMc00017 -4.3 -2.3 homoserine kinase compare
SMc00235 -4.3 -2.9 anthranilate phosphoribosyltransferase compare
SMc03163 -4.2 -13.3 Xylose isomerase (EC 5.3.1.5) (from data) conserved
SMc03164 -4.2 -16.4 Xylulose kinase (EC 2.7.1.17) (from data) conserved
SMc03229 -4.2 -2.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SM_b21174 -4.1 -6.3 phosphate uptake ABC transporter permease compare
SMc02473 -4.1 -12.5 ABC transporter permease conserved
SMc02755 -4.1 -7.3 S-adenosyl-L-homocysteine hydrolase compare
SMc02707 -4.1 -6.1 hypothetical protein compare
SMa1635 -4.0 -1.6 hypothetical protein compare
SMc01770 -4.0 -1.7 serine hydroxymethyltransferase compare
SMc00236 -4.0 -3.8 Indole-3-glycerol phosphate synthase compare
SMc03795 -3.9 -2.0 isopropylmalate isomerase small subunit compare
SMc02165 -3.8 -3.7 orotate phosphoribosyltransferase compare
SMc04002 -3.8 -6.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00815 -3.8 -2.5 inosine 5'-monophosphate dehydrogenase compare
SMc01360 -3.7 -2.5 aspartate carbamoyltransferase catalytic subunit compare
SMc01880 -3.7 -2.5 pantoate--beta-alanine ligase compare
SMc02474 -3.6 -2.8 ABC transporter ATP-binding protein compare
SMc02166 -3.5 -7.8 dihydroorotase compare
SMc04346 -3.3 -4.4 ketol-acid reductoisomerase compare
SMc02765 -3.3 -7.4 tryptophan synthase subunit alpha compare
SM_b21175 -3.3 -6.2 phosphate uptake ABC transporter permease compare
SMc01881 -3.3 -3.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01361 -3.3 -3.2 dihydroorotase compare
SM_b21176 -3.1 -5.9 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00294 -3.1 -9.5 aminotransferase compare
SMc02246 -3.1 -1.2 hypothetical protein compare
SMc00412 -3.0 -3.6 orotidine 5'-phosphate decarboxylase compare
SMc02138 -3.0 -3.9 acetylornithine transaminase compare
SMc00726 -3.0 -1.1 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc03826 -2.8 -1.9 argininosuccinate synthase compare
SMc01206 -2.8 -2.4 queuine tRNA-ribosyltransferase compare
SMc03978 -2.6 -1.8 transketolase compare
SMc02495 -2.5 -1.9 translaldolase compare
SMc03165 -2.5 -3.3 Novel Xylose regulator from LacI family (from data) compare
SMc02983 -2.4 -9.1 ornithine, DAP, or arginine decarboxylase compare
SMc00451 -2.4 -11.4 processing protease compare
SMc00450 -2.3 -2.7 protoheme IX farnesyltransferase compare
SMc00405 -2.2 -9.1 hypothetical protein compare
SMc02640 -2.2 -5.6 UDP-glucuronic acid epimerase compare
SMc02172 -2.2 -9.4 transcriptional regulator compare
SMc00982 -2.2 -5.4 dioxygenase compare
SMc03981 -2.2 -3.9 phosphoglycerate kinase compare
SMc03979 -2.1 -2.8 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00414 -2.1 -10.2 hypothetical protein compare
SMc02574 -2.1 -3.1 imidazoleglycerol-phosphate dehydratase compare
SMc03763 -2.0 -1.4 cytosine-specific methyltransferase compare
SMc01430 -2.0 -7.6 acetolactate synthase 3 regulatory subunit compare
SMc02724 -2.0 -3.4 hypothetical protein compare
SMc02112 -1.9 -6.9 hypothetical protein compare
SMc01028 -1.9 -12.0 phosphopyruvate hydratase compare
SMc03836 -1.9 -2.4 acyl-CoA thioesterase i protein compare
SMc04005 -1.8 -5.7 pyruvate kinase compare
SMc03061 -1.7 -11.3 ABC transporter for D-maltose/D-trehalose/sucrose, substrate-binding component (AglE) (from data) compare
SMc02435 -1.7 -2.0 methyltransferase compare
SMc02838 -1.7 -5.8 phosphoglyceromutase compare
SMc00010 -1.6 -1.8 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc01569 -1.6 -0.8 carbamoyl phosphate synthase small subunit compare
SMc02407 -1.6 -5.2 hypothetical protein compare
SMc01215 -1.6 -1.1 carbamoyl phosphate synthase large subunit compare
SMc03065 -1.6 -7.1 ABC transporter for D-maltose/D-trehalose/sucrose, ATPase component (AglK) (from data) compare
SMc04000 -1.6 -1.2 hypothetical protein compare
SM_b20307 -1.6 -1.0 dihydroxyacetone kinase compare
SMc01578 -1.5 -7.7 aspartate aminotransferase compare
SMc01568 -1.5 -2.1 hypothetical protein compare
SMc01501 -1.5 -2.4 mannitol 2-dehydrogenase compare
SMc02362 -1.5 -1.8 cytochrome c-type biogenesis protein CcmE compare
SMc02753 -1.5 -1.4 PTS system transporter subunit IIA compare
SMc01124 -1.4 -5.4 PII uridylyl-transferase compare
SMc03069 -1.4 -1.8 6-phosphogluconolactonase compare
SMa2215 -1.4 -3.4 GntR family transcriptional regulator compare
SMc03063 -1.4 -10.0 ABC transporter for D-maltose/D-trehalose/sucrose, permease component 2 (AglG) (from data) compare
SMa2020 -1.4 -5.6 Transcriptional regulator compare
SM_b20483 -1.4 -8.6 catabolite repressor protein compare
SMc02521 -1.4 -4.3 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc00928 -1.4 -1.4 signal peptide protein compare
SMc04296 -1.4 -1.2 cell division protein FtsZ compare
SMc00511 -1.4 -2.9 D-ribulose-5-phosphate 3-epimerase compare
SMc01495 -1.4 -3.0 transcriptional regulator compare
SMc04242 -1.4 -1.8 zinc uptake regulation protein compare
SMc01595 -1.3 -2.6 sensor histidine kinase transmembrane protein compare
SMc01440 -1.3 -4.6 hydrolase serine protease transmembrane protein compare
SMc01842 -1.3 -1.3 methyltransferase transcription regulator protein compare
SMc03062 -1.3 -4.8 ABC transporter for D-maltose/D-trehalose/sucrose, permease component 1 (AglF) (from data) compare
SMa0349 -1.3 -2.2 hypothetical protein compare
SMc02058 -1.3 -2.2 YAJC protein compare
SM_b20258 -1.3 -3.5 transcriptional regulator compare
SMc03974 -1.2 -3.4 hypothetical protein compare
SMc04085 -1.2 -4.2 hypothetical protein compare
SMc03242 -1.2 -2.7 GTP-binding protein compare
SM_b20994 -1.2 -2.2 hypothetical protein compare
SMc03158 -1.2 -2.4 ABC transporter permease compare
SMc04454 -1.2 -6.1 ABC transporter ATP-binding protein compare
SMa0211 -1.2 -1.3 hypothetical protein compare
SM_b20312 -1.2 -7.3 dihydroxyacetone kinase compare
SMc02047 -1.2 -3.9 glycine cleavage system aminomethyltransferase T compare
SM_b21132 -1.2 -3.9 sulfate ABC transporter permease compare
SMc00859 -1.2 -2.2 hypothetical protein compare
SM_b20026 -1.1 -2.4 hypothetical protein compare
SMa0789 -1.1 -2.2 GntR family transcriptional regulator compare
SMc01441 -1.1 -4.7 membrane bound protease compare
SMc00709 -1.1 -3.2 hypothetical protein compare
SMc00321 -1.1 -4.0 tRNA pseudouridine synthase B compare
SMc00981 -1.1 -4.8 ferredoxin protein compare
SMc02558 -1.1 -3.4 hypothetical protein compare
SMc03140 -1.1 -4.0 transcriptional regulator compare
SMc02308 -1.0 -6.2 hypothetical protein compare
SMc02234 -1.0 -1.4 hypothetical protein compare
SMc02145 -1.0 -0.9 signal peptide protein compare
SMc01153 -1.0 -1.7 enoyl-CoA hydratase compare
SMc02716 -1.0 -2.5 hypothetical protein compare
SMc01454 -1.0 -7.5 hypothetical protein compare
SMc04344 -1.0 -1.1 signal peptide protein compare
SMc01164 -1.0 -4.9 hypothetical protein compare
SMc02049 -1.0 -7.8 glycine dehydrogenase compare
SMc02141 -1.0 -2.1 phosphate transporter PhoU compare
SMc00013 -1.0 -1.6 cytochrome C oxidase subunit III transmembrane protein compare
SMc00320 -1.0 -3.4 ribosome-binding factor A compare
SMc00838 -1.0 -5.3 hypothetical protein compare
SMc02690 -1.0 -2.9 hypothetical protein compare
SMc02460 -1.0 -6.6 hypothetical protein compare
SMc02048 -1.0 -3.1 glycine cleavage system protein H compare
SMc01858 -0.9 -1.5 S-adenosyl-methyltransferase MraW compare
SM_b21035 -0.9 -2.4 hypothetical protein compare
SMc01315 -0.9 -1.4 hypothetical protein compare
SM_b21130 -0.9 -4.8 sulfate ABC transporter ATP-binding protein compare
SMc02102 -0.9 -2.9 hypothetical protein compare
SMc02050 -0.9 -2.4 trigger factor compare
SMc00622 -0.9 -4.1 ribonuclease D protein compare
SMa0674 -0.9 -1.3 hypothetical protein compare
SM_b21133 -0.9 -5.0 sulfate ABC transporter substrate-binding protein compare
SMc02434 -0.9 -2.1 hypothetical protein compare
SMc03880 -0.9 -4.8 hypothetical protein compare
SMc01508 -0.9 -2.5 hypothetical protein compare
SM_b20105 -0.9 -1.5 transcriptional regulator compare
SMc02385 -0.9 -2.0 hypothetical protein compare
SMa5033 -0.9 -0.9 hypothetical protein compare
SMc03993 -0.9 -3.7 hypothetical protein compare
SM_b20746 -0.9 -1.0 hypothetical protein compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Xylobiose in Sinorhizobium meliloti 1021

For carbon source Xylobiose across organisms