Experiment set17IT029 for Sinorhizobium meliloti 1021

Compare to:

methyl 3-keto-a-D-glucopyranoside carbon source

200 most important genes:

  gene name fitness t score description  
SMc02717 -6.8 -11.4 2-isopropylmalate synthase compare
SMc00494 -6.4 -2.2 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00640 -6.3 -8.6 phosphoserine aminotransferase compare
SMc02899 -6.3 -11.3 prephenate dehydratase compare
SMc02570 -6.2 -7.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc02569 -6.2 -6.0 imidazole glycerol phosphate synthase subunit HisF compare
SMc00917 -6.1 -6.0 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00614 -6.0 -8.2 phosphoribosylglycinamide formyltransferase compare
SMc04405 -5.9 -12.0 3-isopropylmalate dehydrogenase compare
SMc01843 -5.8 -12.6 5,10-methylenetetrahydrofolate reductase compare
SMc02572 -5.7 -4.1 imidazole glycerol phosphate synthase subunit HisH compare
SMc04026 -5.6 -10.3 glutamate synthase compare
SMc01494 -5.5 -8.9 phosphoserine phosphatase compare
SMc03823 -5.5 -11.9 isopropylmalate isomerase large subunit compare
SMc04028 -5.4 -21.0 glutamate synthase compare
SMc00488 -5.4 -17.3 phosphoribosylformylglycinamidine synthase II compare
SMc00493 -5.3 -8.1 phosphoribosylformylglycinamidine synthase I compare
SMc01431 -5.3 -16.3 acetolactate synthase 3 catalytic subunit compare
SMc03797 -5.3 -11.2 homoserine O-succinyltransferase compare
SMc01726 -5.2 -5.6 acetylglutamate kinase compare
SMc03112 -5.1 -14.7 B12-dependent methionine synthase compare
SMc00495 -5.1 -7.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02217 -5.1 -9.2 O-succinylhomoserine sulfhydrylase compare
SMc03776 -5.1 -3.5 gamma-glutamyl kinase compare
SMc01004 -5.0 -8.2 phosphoribosyl-AMP cyclohydrolase compare
SMc00711 -5.0 -6.2 cyclohexadienyl dehydrogenase compare
SMc02137 -5.0 -4.7 ornithine carbamoyltransferase compare
SMc00090 -5.0 -11.9 sulfate adenylyltransferase compare
SMc04045 -5.0 -12.0 dihydroxy-acid dehydratase compare
SMc03895 -5.0 -18.4 pyruvate carboxylase compare
SMc00091 -4.9 -13.1 sulfate adenylyltransferase compare
SMc01054 -4.9 -3.4 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc03979 -4.9 -3.2 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00918 -4.8 -12.1 ATP phosphoribosyltransferase regulatory subunit compare
SMc00993 -4.8 -12.4 phosphoribosylamine--glycine ligase compare
SMc00615 -4.8 -9.5 phosphoribosylaminoimidazole synthetase compare
SMc02407 -4.6 -10.3 hypothetical protein compare
SMc02767 -4.6 -3.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00131 -4.6 -17.0 transcriptional regulator compare
SM_b20326 -4.5 -8.8 ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) (from data) conserved
SMc00293 -4.5 -10.9 homoserine dehydrogenase compare
SMc00554 -4.4 -9.8 amidophosphoribosyltransferase compare
SMc02245 -4.3 -5.1 dihydroorotate dehydrogenase 2 compare
SMc03777 -4.3 -7.7 gamma-glutamyl phosphate reductase compare
SMc04088 -4.1 -10.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc03070 -4.1 -8.7 glucose-6-phosphate 1-dehydrogenase compare
SMc00017 -4.1 -2.0 homoserine kinase compare
SMc01801 -4.1 -2.7 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc00235 -4.0 -2.8 anthranilate phosphoribosyltransferase compare
SMc02124 -4.0 -14.7 nitrite reductase compare
SMc01770 -3.9 -1.5 serine hydroxymethyltransferase compare
SMc00236 -3.8 -3.2 Indole-3-glycerol phosphate synthase compare
SMc00412 -3.8 -2.6 orotidine 5'-phosphate decarboxylase compare
SMc00092 -3.8 -10.7 phosphoadenosine phosphosulfate reductase compare
SMc02725 -3.8 -7.6 anthranilate synthase compare
SMc01053 -3.8 -5.3 siroheme synthase compare
SMc03795 -3.7 -1.8 isopropylmalate isomerase small subunit compare
SMc03161 -3.7 -11.6 oxidoreductase compare
SMc02425 -3.6 -3.4 transcriptional regulator compare
SMc02765 -3.6 -7.4 tryptophan synthase subunit alpha compare
SMc00815 -3.6 -2.2 inosine 5'-monophosphate dehydrogenase compare
SMc02766 -3.6 -8.4 tryptophan synthase subunit beta compare
SMc00876 -3.6 -5.7 ATP-binding MRP protein compare
SMc02123 -3.6 -5.1 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc02055 -3.5 -3.2 phytoene synthase compare
SMc01360 -3.5 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc00619 -3.5 -2.4 hypothetical protein compare
SMc04001 -3.5 -1.7 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc04002 -3.4 -6.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc00641 -3.4 -4.6 D-3-phosphoglycerate dehydrogenase compare
SMc00294 -3.4 -11.3 aminotransferase compare
SMc02138 -3.3 -3.9 acetylornithine transaminase compare
SMc02755 -3.3 -6.7 S-adenosyl-L-homocysteine hydrolase compare
SM_b21176 -3.2 -4.7 phosphate uptake ABC transporter substrate-binding protein precursor compare
SM_b21174 -3.2 -7.0 phosphate uptake ABC transporter permease compare
SM_b20325 -3.1 -12.5 ABC transporter for D-trehalose/D-maltose/sucrose, substrate-binding component (ThuE) (from data) conserved
SMc01206 -3.1 -2.1 queuine tRNA-ribosyltransferase compare
SMc04346 -3.0 -3.8 ketol-acid reductoisomerase compare
SMc02166 -3.0 -7.0 dihydroorotase compare
SM_b20329 -3.0 -10.0 required for glucoside 3-dehydrogenase activity on raffinose or trehalose (thuA) (EC 1.1.99.13) (from data) compare
SMc02246 -3.0 -1.0 hypothetical protein compare
SMc02307 -2.9 -7.9 histidinol dehydrogenase compare
SMc02707 -2.8 -3.4 hypothetical protein compare
SM_b21177 -2.8 -7.2 phosphate uptake ABC transporter ATP-binding protein compare
SM_b20509 -2.8 -2.9 transcriptional regulator compare
SMa1635 -2.7 -1.3 hypothetical protein compare
SMc02983 -2.7 -5.6 ornithine, DAP, or arginine decarboxylase compare
SMc02165 -2.7 -5.7 orotate phosphoribosyltransferase compare
SM_b20994 -2.7 -5.1 hypothetical protein compare
SMc03826 -2.7 -1.8 argininosuccinate synthase compare
SMc01028 -2.5 -11.8 phosphopyruvate hydratase compare
SMc02172 -2.5 -9.1 transcriptional regulator compare
SMc01881 -2.5 -2.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc01124 -2.5 -8.4 PII uridylyl-transferase compare
SMc03978 -2.4 -1.6 transketolase compare
SMc01430 -2.4 -4.0 acetolactate synthase 3 regulatory subunit compare
SMc03974 -2.4 -6.3 hypothetical protein compare
SMc03981 -2.4 -3.6 phosphoglycerate kinase compare
SMc03100 -2.3 -1.8 hypothetical protein compare
SMc01880 -2.3 -3.1 pantoate--beta-alanine ligase compare
SMa2020 -2.3 -6.4 Transcriptional regulator compare
SMc04000 -2.2 -2.0 hypothetical protein compare
SMc00419 -2.2 -3.8 glutathione synthetase compare
SM_b21175 -2.1 -3.8 phosphate uptake ABC transporter permease compare
SMc03062 -2.1 -5.2 ABC transporter for D-maltose/D-trehalose/sucrose, permease component 1 (AglF) (from data) compare
SMc02833 -2.0 -1.3 penicillin-insensitive murein endopeptidase compare
SM_b20327 -2.0 -3.7 ABC transporter for D-trehalose/D-maltose/sucrose, permease component 2 (ThuG) (from data) compare
SMc02478 -1.9 -7.6 hypothetical protein compare
SMc03162 -1.9 -6.4 3-ketoglucose dehydratase (from data) compare
SMc03763 -1.9 -1.3 cytosine-specific methyltransferase compare
SMa1442 -1.9 -3.7 GntR family transcriptional regulator compare
SMc00451 -1.9 -6.9 processing protease compare
SMc01361 -1.9 -2.3 dihydroorotase compare
SMc01578 -1.9 -8.6 aspartate aminotransferase compare
SMc03140 -1.9 -3.7 transcriptional regulator compare
SMc03069 -1.9 -2.0 6-phosphogluconolactonase compare
SMc02835 -1.8 -7.0 glucokinase compare
SMc00405 -1.8 -6.0 hypothetical protein compare
SMc02838 -1.8 -2.7 phosphoglyceromutase compare
SM_b20312 -1.7 -7.6 dihydroxyacetone kinase compare
SMc00461 -1.7 -2.2 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMc03061 -1.7 -8.8 ABC transporter for D-maltose/D-trehalose/sucrose, substrate-binding component (AglE) (from data) compare
SM_b20323 -1.6 -1.2 transcriptional regulator compare
SM_b20717 -1.6 -6.1 LacI family transcriptional regulator compare
SMc03229 -1.6 -1.8 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SM_b20427 -1.6 -2.8 amino acid ABC transporter ATP-binding protein compare
SMa2034 -1.6 -1.9 hypothetical protein compare
SMc00928 -1.5 -1.3 signal peptide protein compare
SMc03013 -1.5 -4.0 hypothetical protein compare
SMc03063 -1.5 -10.0 ABC transporter for D-maltose/D-trehalose/sucrose, permease component 2 (AglG) (from data) compare
SMc02225 -1.5 -3.7 hypothetical protein compare
SMc00974 -1.5 -3.1 RNA methyltransferase compare
SMc01569 -1.5 -0.7 carbamoyl phosphate synthase small subunit compare
SMc00302 -1.5 -2.4 hypothetical protein compare
SMc00414 -1.5 -8.3 hypothetical protein compare
SMc00982 -1.4 -5.1 dioxygenase compare
SMc00647 -1.4 -2.9 ribosomal large subunit pseudouridine synthase compare
SM_b20307 -1.4 -0.8 dihydroxyacetone kinase compare
SMc01215 -1.4 -1.0 carbamoyl phosphate synthase large subunit compare
SMc00555 -1.4 -1.3 colicin V production transmembrane protein compare
SMc02778 -1.4 -1.2 hydroxyacid aldolase compare
SMc02434 -1.4 -3.1 hypothetical protein compare
SMc01522 -1.4 -2.0 hypothetical protein compare
SM_b21182 -1.4 -5.4 hypothetical protein compare
SMc00010 -1.4 -1.4 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc01164 -1.4 -5.4 hypothetical protein compare
SMc00859 -1.4 -2.1 hypothetical protein compare
SMc01991 -1.4 -1.8 short chain dehydrogenase compare
SMc01842 -1.3 -1.4 methyltransferase transcription regulator protein compare
SMc00329 -1.3 -3.3 iron response regulator protein compare
SMc00505 -1.3 -2.1 hypothetical protein compare
SMc02112 -1.3 -3.6 hypothetical protein compare
SMa0882 -1.3 -1.5 hypothetical protein compare
SM_b20953 -1.3 -1.2 hypothetical protein compare
SMc00492 -1.2 -0.7 hypothetical protein compare
SMc03065 -1.2 -6.0 ABC transporter for D-maltose/D-trehalose/sucrose, ATPase component (AglK) (from data) compare
SMc01147 -1.2 -2.8 coproporphyrinogen III oxidase compare
SMa1017 -1.2 -1.5 hypothetical protein compare
SMc00334 -1.2 -0.9 cytidylate kinase compare
SMc04391 -1.2 -1.2 3-ketoacyl-ACP reductase compare
SMc04085 -1.2 -3.0 hypothetical protein compare
SM_b20948 -1.2 -1.3 glucosyltransferase compare
SMa2168 -1.2 -1.7 tRNA-Met compare
SMc02694 -1.1 -1.1 ATP-dependent Clp protease adaptor compare
SMc01187 -1.1 -1.5 rare lipoprotein A compare
SM_b21181 -1.1 -5.6 glutaryl-CoA dehydrogenase compare
SMc02719 -1.1 -0.9 transposase compare
SMc01568 -1.1 -1.4 hypothetical protein compare
SMc02558 -1.1 -3.9 hypothetical protein compare
SMc03849 -1.1 -0.6 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02048 -1.1 -5.1 glycine cleavage system protein H compare
SMc02574 -1.1 -2.1 imidazoleglycerol-phosphate dehydratase compare
SM_b20105 -1.1 -1.3 transcriptional regulator compare
SMc04262 -1.1 -4.6 6-phosphogluconate dehydrogenase compare
SM_b20414 -1.1 -1.6 hypothetical protein compare
SMc00404 -1.1 -0.9 hypothetical protein compare
SM_b20773 -1.0 -2.5 GntR family transcriptional regulator compare
SM_b21132 -1.0 -3.8 sulfate ABC transporter permease compare
SMc00187 -1.0 -2.3 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc02451 -1.0 -1.0 hypothetical protein compare
SMc02495 -1.0 -1.1 translaldolase compare
SMc02049 -1.0 -6.9 glycine dehydrogenase compare
SMa0222 -1.0 -2.4 GntR family transcriptional regulator compare
SM_b20501 -1.0 -5.1 transcriptional regulator compare
SMc03250 -1.0 -2.0 hypothetical protein compare
SM_b21454 -1.0 -1.4 hypothetical protein compare
SMc04115 -0.9 -1.6 hypothetical protein compare
SMc03046 -0.9 -3.6 transcriptional regulator compare
SMc04134 -0.9 -3.4 transcriptional regulator compare
SMc02695 -0.9 -3.4 GTP-dependent nucleic acid-binding protein EngD compare
SMc02435 -0.9 -1.8 methyltransferase compare
SMc03068 -0.9 -4.2 phosphogluconate dehydratase compare
SM_b21374 -0.9 -2.3 tagatose kinase (EC 2.7.1.101) (from data) compare
SMc02640 -0.9 -3.0 UDP-glucuronic acid epimerase compare
SMc01723 -0.9 -1.2 hypothetical protein compare
SMc01363 -0.9 -1.1 hypothetical protein compare
SMc00053 -0.9 -0.7 monovalent cation/H+ antiporter subunit C compare
SMc01441 -0.9 -3.9 membrane bound protease compare
SMa1570 -0.9 -1.1 PilA2 pilus assembly protein compare
SMc03780 -0.9 -2.9 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source methyl 3-keto-a-D-glucopyranoside in Sinorhizobium meliloti 1021

For carbon source methyl 3-keto-a-D-glucopyranoside across organisms