Experiment set17IT027 for Sinorhizobium meliloti 1021

Compare to:

Methyl beta-D-glucopyranoside carbon source

200 most important genes:

  gene name fitness t score description  
SMc02572 -9.8 -6.4 imidazole glycerol phosphate synthase subunit HisH compare
SMc00495 -8.0 -5.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01726 -7.6 -7.4 acetylglutamate kinase compare
SMc02717 -7.2 -8.5 2-isopropylmalate synthase compare
SMc00711 -7.1 -4.9 cyclohexadienyl dehydrogenase compare
SMc00918 -7.1 -6.9 ATP phosphoribosyltransferase regulatory subunit compare
SMc01801 -7.0 -4.8 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc03823 -6.9 -11.6 isopropylmalate isomerase large subunit compare
SMc04405 -6.8 -8.1 3-isopropylmalate dehydrogenase compare
SMc02137 -6.7 -4.7 ornithine carbamoyltransferase compare
SMc01431 -6.7 -10.2 acetolactate synthase 3 catalytic subunit compare
SMc00614 -6.6 -7.8 phosphoribosylglycinamide formyltransferase compare
SMc00494 -6.5 -2.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02899 -6.5 -13.2 prephenate dehydratase compare
SMc02123 -6.4 -4.4 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc04045 -6.4 -9.8 dihydroxy-acid dehydratase compare
SMc00917 -6.3 -6.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc01843 -6.3 -12.1 5,10-methylenetetrahydrofolate reductase compare
SMc03797 -6.3 -12.0 homoserine O-succinyltransferase compare
SMc02569 -6.2 -5.3 imidazole glycerol phosphate synthase subunit HisF compare
SMc02570 -6.1 -7.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc01494 -6.1 -10.5 phosphoserine phosphatase compare
SMc02245 -5.9 -4.1 dihydroorotate dehydrogenase 2 compare
SMc00488 -5.9 -19.6 phosphoribosylformylglycinamidine synthase II compare
SMc04028 -5.9 -20.5 glutamate synthase compare
SMc00640 -5.8 -11.8 phosphoserine aminotransferase compare
SMc00293 -5.8 -14.9 homoserine dehydrogenase compare
SMc00993 -5.8 -10.3 phosphoribosylamine--glycine ligase compare
SMc03895 -5.7 -18.1 pyruvate carboxylase compare
SMc00092 -5.7 -12.4 phosphoadenosine phosphosulfate reductase compare
SMc02425 -5.6 -3.9 transcriptional regulator compare
SMc02217 -5.6 -8.5 O-succinylhomoserine sulfhydrylase compare
SMc00615 -5.5 -7.7 phosphoribosylaminoimidazole synthetase compare
SMc01004 -5.4 -8.2 phosphoribosyl-AMP cyclohydrolase compare
SMc03777 -5.3 -8.9 gamma-glutamyl phosphate reductase compare
SMc03776 -5.2 -3.6 gamma-glutamyl kinase compare
SMc00131 -5.2 -13.7 transcriptional regulator compare
SMc03112 -5.2 -15.0 B12-dependent methionine synthase compare
SMc02124 -5.2 -15.0 nitrite reductase compare
SMc00554 -5.2 -9.3 amidophosphoribosyltransferase compare
SMc01054 -5.1 -4.5 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc04026 -4.9 -8.7 glutamate synthase compare
SMc03070 -4.8 -8.0 glucose-6-phosphate 1-dehydrogenase compare
SMc04256 -4.7 -17.5 ABC transporter for D-Cellobiose and D-Salicin, ATPase component (from data) compare
SMc04002 -4.6 -9.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc03161 -4.6 -10.9 oxidoreductase compare
SMc00236 -4.6 -3.2 Indole-3-glycerol phosphate synthase compare
SMc04253 -4.6 -19.8 oxidoreductase compare
SMc02766 -4.6 -5.5 tryptophan synthase subunit beta compare
SMc02725 -4.5 -6.2 anthranilate synthase compare
SMc04088 -4.5 -8.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc04259 -4.4 -5.8 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMc02307 -4.4 -10.2 histidinol dehydrogenase compare
SMc00090 -4.4 -10.7 sulfate adenylyltransferase compare
SMc04257 -4.3 -18.1 ABC transporter for D-Cellobiose and D-Salicin, permease component 1 (from data) compare
SMc00017 -4.3 -2.3 homoserine kinase compare
SMc03229 -4.2 -2.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc03979 -4.2 -4.0 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00235 -4.2 -2.9 anthranilate phosphoribosyltransferase compare
SMc00493 -4.1 -5.5 phosphoribosylformylglycinamidine synthase I compare
SMc02767 -4.1 -4.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00876 -4.1 -7.8 ATP-binding MRP protein compare
SMc02166 -4.1 -10.7 dihydroorotase compare
SM_b21176 -4.0 -4.7 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc01770 -4.0 -1.7 serine hydroxymethyltransferase compare
SMc01053 -4.0 -4.7 siroheme synthase compare
SMc00091 -4.0 -12.8 sulfate adenylyltransferase compare
SMa1635 -4.0 -1.5 hypothetical protein compare
SMc04255 -3.9 -16.1 beta-mannosidase compare
SMc00412 -3.9 -2.7 orotidine 5'-phosphate decarboxylase compare
SMc03795 -3.9 -2.0 isopropylmalate isomerase small subunit compare
SMc02755 -3.8 -7.2 S-adenosyl-L-homocysteine hydrolase compare
SMc04258 -3.7 -11.2 ABC transporter for D-Cellobiose and D-Salicin, permease component 2 (from data) compare
SMa1570 -3.7 -3.3 PilA2 pilus assembly protein compare
SMc01360 -3.7 -2.5 aspartate carbamoyltransferase catalytic subunit compare
SMc04001 -3.6 -2.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SM_b21177 -3.6 -8.7 phosphate uptake ABC transporter ATP-binding protein compare
SMc01880 -3.6 -2.5 pantoate--beta-alanine ligase compare
SMa0882 -3.5 -1.8 hypothetical protein compare
SMc02165 -3.5 -5.3 orotate phosphoribosyltransferase compare
SMc02138 -3.4 -5.1 acetylornithine transaminase compare
SMc04346 -3.3 -3.5 ketol-acid reductoisomerase compare
SM_b21174 -3.3 -6.5 phosphate uptake ABC transporter permease compare
SMc03162 -3.3 -10.7 3-ketoglucose dehydratase (from data) compare
SMc01881 -3.2 -3.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SM_b21175 -3.2 -5.6 phosphate uptake ABC transporter permease compare
SMc02765 -3.2 -8.6 tryptophan synthase subunit alpha compare
SMc02246 -3.1 -1.2 hypothetical protein compare
SMc02707 -3.0 -5.0 hypothetical protein compare
SMc00294 -3.0 -11.2 aminotransferase compare
SMc02055 -2.9 -3.4 phytoene synthase compare
SMc01361 -2.8 -3.8 dihydroorotase compare
SMc03826 -2.8 -1.9 argininosuccinate synthase compare
SMc00641 -2.7 -4.1 D-3-phosphoglycerate dehydrogenase compare
SMc00982 -2.6 -6.4 dioxygenase compare
SMc03100 -2.5 -2.2 hypothetical protein compare
SMc04254 -2.5 -3.0 hypothetical protein compare
SMc02407 -2.4 -9.5 hypothetical protein compare
SMc02140 -2.4 -1.4 phosphate regulon transcriptional regulatory protein compare
SMc00815 -2.2 -1.6 inosine 5'-monophosphate dehydrogenase compare
SMc03981 -2.2 -2.9 phosphoglycerate kinase compare
SMc02835 -2.1 -7.7 glucokinase compare
SMc02434 -2.1 -3.1 hypothetical protein compare
SMc03763 -2.1 -1.4 cytosine-specific methyltransferase compare
SMc03978 -1.9 -2.2 transketolase compare
SMc02753 -1.9 -1.6 PTS system transporter subunit IIA compare
SMc02777 -1.9 -4.6 transcriptional regulator compare
SMc00451 -1.9 -6.0 processing protease compare
SMc01430 -1.9 -5.0 acetolactate synthase 3 regulatory subunit compare
SMc02640 -1.9 -5.1 UDP-glucuronic acid epimerase compare
SMc00414 -1.8 -9.8 hypothetical protein compare
SMc01569 -1.7 -0.9 carbamoyl phosphate synthase small subunit compare
SMc01215 -1.5 -1.0 carbamoyl phosphate synthase large subunit compare
SMc00405 -1.5 -7.3 hypothetical protein compare
SMc00800 -1.5 -2.2 hypothetical protein compare
SMc00419 -1.5 -3.6 glutathione synthetase compare
SMc01206 -1.5 -1.9 queuine tRNA-ribosyltransferase compare
SMc00334 -1.4 -1.5 cytidylate kinase compare
SMc01028 -1.4 -8.0 phosphopyruvate hydratase compare
SMc01800 -1.4 -1.2 cytochrome C oxidase assembly transmembrane protein compare
SMc02102 -1.4 -3.8 hypothetical protein compare
SMa0211 -1.4 -1.4 hypothetical protein compare
SMc03839 -1.4 -2.3 hypothetical protein compare
SMc01124 -1.4 -5.2 PII uridylyl-transferase compare
SMc02850 -1.3 -2.2 DNA polymerase I compare
SMc02838 -1.3 -3.4 phosphoglyceromutase compare
SMc02172 -1.3 -7.2 transcriptional regulator compare
SMc02983 -1.3 -4.9 ornithine, DAP, or arginine decarboxylase compare
SMc02058 -1.3 -3.4 YAJC protein compare
SMc03069 -1.3 -2.4 6-phosphogluconolactonase compare
SMc01183 -1.3 -1.3 LexA repressor compare
SMc00010 -1.2 -1.6 cytochrome C oxidase polypeptide I transmembrane protein compare
SMa1365 -1.2 -1.3 ATP-binding protein compare
SMc01578 -1.2 -7.8 aspartate aminotransferase compare
SMc03068 -1.2 -5.3 phosphogluconate dehydratase compare
SMa0789 -1.2 -2.7 GntR family transcriptional regulator compare
SMc02147 -1.2 -4.6 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc01842 -1.2 -1.1 methyltransferase transcription regulator protein compare
SMa0717 -1.1 -5.2 hypothetical protein compare
SMc02659 -1.1 -4.1 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc00928 -1.1 -1.4 signal peptide protein compare
SMc02451 -1.1 -1.5 hypothetical protein compare
SMa1297 -1.1 -3.2 hypothetical protein compare
SMc00053 -1.1 -0.9 monovalent cation/H+ antiporter subunit C compare
SMc00511 -1.0 -3.7 D-ribulose-5-phosphate 3-epimerase compare
SMc04003 -1.0 -1.8 50S ribosomal protein L36 compare
SMc01501 -1.0 -1.8 mannitol 2-dehydrogenase compare
SMc03993 -1.0 -2.8 hypothetical protein compare
SMc04000 -1.0 -0.7 hypothetical protein compare
SMc01364 -1.0 -0.9 DNA topoisomerase I compare
SMc00072 -1.0 -1.7 peroxiredoxin protein compare
SM_b21102 -1.0 -5.4 transcriptional regulator compare
SMc02724 -1.0 -1.9 hypothetical protein compare
SMc02121 -1.0 -1.3 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc02107 -1.0 -1.2 hypothetical protein compare
SMc02164 -1.0 -2.0 fructokinase compare
SMc01147 -0.9 -2.3 coproporphyrinogen III oxidase compare
SMc00369 -0.9 -1.4 oxidoreductase compare
SMc03924 -0.9 -5.7 glycogen synthase compare
SMc01495 -0.9 -3.3 transcriptional regulator compare
SMc02510 -0.9 -0.7 ferric uptake regulation protein compare
SMc01441 -0.9 -3.1 membrane bound protease compare
SMc02071 -0.9 -2.8 hydrolase glycosidase compare
SMc02521 -0.9 -1.8 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc00189 -0.9 -4.3 cytochrome C1 protein compare
SMc02112 -0.9 -3.2 hypothetical protein compare
SMc00188 -0.9 -4.6 cytochrome B transmembrane protein compare
SMc00073 -0.9 -1.4 hypothetical protein compare
SMc00012 -0.8 -0.9 cytochrome C oxidase assembly protein compare
SMc00013 -0.8 -1.3 cytochrome C oxidase subunit III transmembrane protein compare
SMc00067 -0.8 -4.9 outer-membranne lipoprotein compare
SMa1101 -0.8 -1.0 hypothetical protein compare
SMc00838 -0.8 -4.2 hypothetical protein compare
SM_b20021 -0.8 -0.7 transcriptional regulator compare
SMc02338 -0.8 -1.0 periplasmic binding ABC transporter protein compare
SMc01768 -0.8 -2.8 transcriptional regulator compare
SMc02384 -0.8 -4.4 glycosyltransferase transmembrane protein compare
SMa0448 -0.8 -1.9 hypothetical protein compare
SM_b20909 -0.8 -1.7 hypothetical protein compare
SMc02362 -0.8 -1.2 cytochrome c-type biogenesis protein CcmE compare
SMc00726 -0.8 -0.5 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc04085 -0.8 -2.5 hypothetical protein compare
SMc00650 -0.8 -1.5 hypothetical protein compare
SMc02574 -0.8 -1.3 imidazoleglycerol-phosphate dehydratase compare
SM_b20258 -0.8 -2.5 transcriptional regulator compare
SMc02719 -0.8 -0.8 transposase compare
SMa0222 -0.8 -2.4 GntR family transcriptional regulator compare
SMc00709 -0.7 -1.6 hypothetical protein compare
SMa1168 -0.7 -2.4 Dehydrogenase, FAD-dependent compare
SMc00619 -0.7 -0.9 hypothetical protein compare
SMc02631 -0.7 -1.3 hypothetical protein compare
SMc01613 -0.7 -2.5 ribose-5-phosphate isomerase B compare
SM_b21035 -0.7 -2.3 hypothetical protein compare
SMc04454 -0.7 -3.9 ABC transporter ATP-binding protein compare
SMa0017 -0.7 -2.3 hypothetical protein compare
SM_b21133 -0.7 -4.3 sulfate ABC transporter substrate-binding protein compare
SMc00361 -0.7 -2.3 hypothetical protein compare
SMc02141 -0.7 -1.8 phosphate transporter PhoU compare
SMc01315 -0.7 -1.0 hypothetical protein compare
SMc02225 -0.7 -2.1 hypothetical protein compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Methyl beta-D-glucopyranoside in Sinorhizobium meliloti 1021

For carbon source Methyl beta-D-glucopyranoside across organisms