Experiment set17IT025 for Sinorhizobium meliloti 1021

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
SMc02899 -8.0 -9.5 prephenate dehydratase compare
SMc02569 -7.4 -5.1 imidazole glycerol phosphate synthase subunit HisF compare
SMc01843 -7.3 -10.0 5,10-methylenetetrahydrofolate reductase compare
SMc04405 -7.1 -9.8 3-isopropylmalate dehydrogenase compare
SMc02572 -7.0 -5.2 imidazole glycerol phosphate synthase subunit HisH compare
SMc00640 -7.0 -6.8 phosphoserine aminotransferase compare
SMc01801 -6.9 -4.4 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02717 -6.7 -12.8 2-isopropylmalate synthase compare
SMc04045 -6.4 -9.7 dihydroxy-acid dehydratase compare
SMc00711 -6.3 -6.1 cyclohexadienyl dehydrogenase compare
SMc00494 -6.3 -2.3 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc01494 -6.3 -8.8 phosphoserine phosphatase compare
SMc00614 -6.2 -8.5 phosphoribosylglycinamide formyltransferase compare
SMc04028 -6.2 -18.7 glutamate synthase compare
SMc01726 -6.1 -7.5 acetylglutamate kinase compare
SMc04026 -6.0 -10.3 glutamate synthase compare
SMc02137 -6.0 -5.8 ornithine carbamoyltransferase compare
SMc03112 -6.0 -20.5 B12-dependent methionine synthase compare
SMc03823 -6.0 -14.2 isopropylmalate isomerase large subunit compare
SMc02245 -5.9 -4.1 dihydroorotate dehydrogenase 2 compare
SMc03797 -5.9 -13.1 homoserine O-succinyltransferase compare
SMc02574 -5.9 -8.3 imidazoleglycerol-phosphate dehydratase compare
SMc01004 -5.8 -9.6 phosphoribosyl-AMP cyclohydrolase compare
SMc02123 -5.8 -4.3 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc01431 -5.7 -13.9 acetolactate synthase 3 catalytic subunit compare
SMc00993 -5.7 -10.9 phosphoribosylamine--glycine ligase compare
SMc02425 -5.6 -3.8 transcriptional regulator compare
SMc00488 -5.5 -19.7 phosphoribosylformylglycinamidine synthase II compare
SMc02217 -5.5 -9.1 O-succinylhomoserine sulfhydrylase compare
SMc00917 -5.3 -5.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00918 -5.3 -9.6 ATP phosphoribosyltransferase regulatory subunit compare
SMc02124 -5.1 -16.7 nitrite reductase compare
SMc04001 -5.1 -1.9 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00131 -5.1 -16.3 transcriptional regulator compare
SMc03895 -5.0 -18.3 pyruvate carboxylase compare
SMc04088 -5.0 -8.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc03070 -5.0 -8.9 glucose-6-phosphate 1-dehydrogenase compare
SMc00554 -4.9 -10.5 amidophosphoribosyltransferase compare
SMc04002 -4.9 -7.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02766 -4.9 -3.4 tryptophan synthase subunit beta compare
SMc01054 -4.8 -4.8 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00495 -4.8 -7.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00293 -4.8 -10.9 homoserine dehydrogenase compare
SMc03776 -4.7 -4.6 gamma-glutamyl kinase compare
SMc02725 -4.7 -4.6 anthranilate synthase compare
SMc00493 -4.7 -7.8 phosphoribosylformylglycinamidine synthase I compare
SMc02570 -4.7 -4.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00092 -4.6 -12.8 phosphoadenosine phosphosulfate reductase compare
SMc02767 -4.6 -4.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00615 -4.6 -9.8 phosphoribosylaminoimidazole synthetase compare
SMc04346 -4.6 -6.9 ketol-acid reductoisomerase compare
SMc00090 -4.5 -10.0 sulfate adenylyltransferase compare
SMc03777 -4.5 -8.5 gamma-glutamyl phosphate reductase compare
SMc00236 -4.4 -3.0 Indole-3-glycerol phosphate synthase compare
SM_b21175 -4.3 -4.2 phosphate uptake ABC transporter permease compare
SMa1635 -4.3 -1.6 hypothetical protein compare
SMc00017 -4.1 -2.1 homoserine kinase compare
SMc00412 -4.0 -2.8 orotidine 5'-phosphate decarboxylase compare
SMc02166 -4.0 -9.0 dihydroorotase compare
SMc03795 -4.0 -2.0 isopropylmalate isomerase small subunit compare
SMc01770 -3.8 -1.6 serine hydroxymethyltransferase compare
SMc02165 -3.8 -4.5 orotate phosphoribosyltransferase compare
SM_b21174 -3.8 -7.0 phosphate uptake ABC transporter permease compare
SMc02755 -3.8 -8.3 S-adenosyl-L-homocysteine hydrolase compare
SMc00815 -3.7 -2.3 inosine 5'-monophosphate dehydrogenase compare
SMc01053 -3.7 -5.8 siroheme synthase compare
SMc00091 -3.7 -11.7 sulfate adenylyltransferase compare
SMc00876 -3.6 -6.9 ATP-binding MRP protein compare
SMc00235 -3.6 -3.5 anthranilate phosphoribosyltransferase compare
SMc01881 -3.6 -4.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc03979 -3.6 -4.0 glyceraldehyde-3-phosphate dehydrogenase compare
SMc02307 -3.6 -8.8 histidinol dehydrogenase compare
SMc02765 -3.6 -8.9 tryptophan synthase subunit alpha compare
SM_b21177 -3.5 -7.7 phosphate uptake ABC transporter ATP-binding protein compare
SMc02138 -3.5 -6.1 acetylornithine transaminase compare
SMc01360 -3.5 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc01880 -3.4 -2.4 pantoate--beta-alanine ligase compare
SMc00294 -3.2 -11.6 aminotransferase compare
SMc00641 -3.2 -5.1 D-3-phosphoglycerate dehydrogenase compare
SMc02246 -3.1 -1.1 hypothetical protein compare
SMc03967 -3.0 -1.8 Holliday junction resolvase compare
SMc03981 -3.0 -5.1 phosphoglycerate kinase compare
SMc03826 -2.9 -2.0 argininosuccinate synthase compare
SMc01183 -2.9 -1.4 LexA repressor compare
SMc03068 -2.8 -9.5 phosphogluconate dehydratase compare
SMc01361 -2.8 -3.3 dihydroorotase compare
SMc03229 -2.7 -2.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc02707 -2.6 -3.1 hypothetical protein compare
SM_b21176 -2.5 -5.6 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc01206 -2.5 -2.1 queuine tRNA-ribosyltransferase compare
SMc01440 -2.3 -6.9 hydrolase serine protease transmembrane protein compare
SMc01124 -2.2 -7.7 PII uridylyl-transferase compare
SM_b20902 -2.2 -10.4 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc03763 -2.2 -1.5 cytosine-specific methyltransferase compare
SMc01578 -2.1 -11.2 aspartate aminotransferase compare
SM_b20903 -2.0 -8.9 sugar uptake ABC transporter permease compare
SMc01441 -2.0 -5.9 membrane bound protease compare
SMc00414 -1.9 -9.5 hypothetical protein compare
SMc00012 -1.9 -1.3 cytochrome C oxidase assembly protein compare
SMc03924 -1.9 -9.5 glycogen synthase compare
SMc02140 -1.9 -1.8 phosphate regulon transcriptional regulatory protein compare
SMc01430 -1.9 -6.1 acetolactate synthase 3 regulatory subunit compare
SMc00053 -1.8 -1.1 monovalent cation/H+ antiporter subunit C compare
SMc03153 -1.8 -3.0 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc00302 -1.8 -2.7 hypothetical protein compare
SMc02835 -1.8 -6.8 glucokinase compare
SMc02362 -1.8 -1.9 cytochrome c-type biogenesis protein CcmE compare
SMc02983 -1.8 -6.6 ornithine, DAP, or arginine decarboxylase compare
SM_b20904 -1.7 -3.5 sugar uptake ABC transporter ATP-binding protein compare
SMc04005 -1.7 -8.6 pyruvate kinase compare
SMc03978 -1.7 -2.3 transketolase compare
SMc01147 -1.7 -3.6 coproporphyrinogen III oxidase compare
SMa1924 -1.7 -1.0 hypothetical protein compare
SMc01028 -1.7 -10.2 phosphopyruvate hydratase compare
SMc02544 -1.7 -1.0 hypothetical protein compare
SMa0753 -1.6 -1.1 hypothetical protein compare
SMc00619 -1.6 -1.8 hypothetical protein compare
SMc01842 -1.6 -1.5 methyltransferase transcription regulator protein compare
SMc02451 -1.6 -2.0 hypothetical protein compare
SMc02521 -1.5 -2.9 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMc00450 -1.5 -1.9 protoheme IX farnesyltransferase compare
SMc02861 -1.5 -1.9 phosphate transporter compare
SM_b20746 -1.5 -1.3 hypothetical protein compare
SMc01569 -1.4 -0.7 carbamoyl phosphate synthase small subunit compare
SMc01852 -1.4 -7.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc04213 -1.4 -1.8 diacylglycerol kinase compare
SMc02141 -1.4 -3.2 phosphate transporter PhoU compare
SMa1323 -1.3 -2.8 Transcription regulator compare
SMc01215 -1.3 -0.9 carbamoyl phosphate synthase large subunit compare
SMc02683 -1.3 -1.6 hypothetical protein compare
SMc03849 -1.3 -0.8 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02838 -1.3 -5.5 phosphoglyceromutase compare
SMc02886 -1.3 -2.3 signal peptide protein compare
SMc02659 -1.3 -3.3 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc00982 -1.3 -4.4 dioxygenase compare
SMc02147 -1.2 -4.3 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02102 -1.2 -3.4 hypothetical protein compare
SMc04454 -1.2 -5.0 ABC transporter ATP-binding protein compare
SMc02050 -1.2 -3.2 trigger factor compare
SMc00760 -1.2 -3.7 recombinase A compare
SMc02058 -1.2 -1.8 YAJC protein compare
SM_b21580 -1.2 -1.7 hypothetical protein compare
SMc01568 -1.2 -1.6 hypothetical protein compare
SMc01613 -1.1 -4.9 ribose-5-phosphate isomerase B compare
SMc00404 -1.1 -1.1 hypothetical protein compare
SMc02724 -1.1 -2.2 hypothetical protein compare
SMc04174 -1.1 -1.7 signal peptide protein compare
SMc02901 -1.1 -0.9 hypothetical protein compare
SMc02055 -1.1 -1.1 phytoene synthase compare
SM_b20691 -1.1 -2.8 hypothetical protein compare
SMc02121 -1.1 -1.2 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMc01260 -1.1 -4.3 transcriptional regulator compare
SMc00856 -1.1 -1.0 hypothetical protein compare
SMc00405 -1.1 -4.7 hypothetical protein compare
SMc02505 -1.1 -1.3 hypothetical protein compare
SMc03046 -1.1 -3.3 transcriptional regulator compare
SMc02084 -1.1 -0.9 biopolymer transport transmembrane protein compare
SMc01615 -1.0 -1.6 transcriptional regulator compare
SMc03053 -1.0 -1.4 flagellar biosynthesis protein FliQ compare
SMc02435 -1.0 -1.9 methyltransferase compare
SMc04246 -1.0 -1.4 transmembrane signal peptide protein compare
SMa0955 -1.0 -1.7 GntR family transcriptional regulator compare
SMc02460 -1.0 -7.0 hypothetical protein compare
SMc02685 -1.0 -1.8 hypothetical protein compare
SMc02308 -0.9 -2.9 hypothetical protein compare
SMc03836 -0.9 -1.5 acyl-CoA thioesterase i protein compare
SM_b20294 -0.9 -1.1 transcriptional regulator NanR compare
SM_b20773 -0.9 -3.8 GntR family transcriptional regulator compare
SMc00709 -0.9 -2.2 hypothetical protein compare
SMc04052 -0.9 -1.3 transcriptional regulator compare
SM_b20540 -0.9 -1.1 hypothetical protein compare
SMc01438 -0.9 -2.2 protease precursor signal peptide protein compare
SMc04348 -0.9 -1.1 transcriptional regulator compare
SMc00088 -0.9 -1.0 hypothetical protein compare
SMc00187 -0.8 -1.8 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc03258 -0.8 -3.5 transcriptional regulator compare
SMc03227 -0.8 -3.9 hypothetical protein compare
SMc00914 -0.8 -2.2 oxidoreductase compare
SM_b21035 -0.8 -2.8 hypothetical protein compare
SMc00799 -0.8 -1.5 hypothetical protein compare
SMc00072 -0.8 -1.3 peroxiredoxin protein compare
SMc02714 -0.8 -1.2 hypothetical protein compare
SMc02107 -0.8 -0.9 hypothetical protein compare
SMc02470 -0.8 -2.5 transcriptional regulator compare
SMc03069 -0.8 -1.3 6-phosphogluconolactonase compare
SMc01091 -0.8 -1.4 hypothetical protein compare
SMc02640 -0.8 -2.9 UDP-glucuronic acid epimerase compare
SMc00513 -0.8 -4.3 amino acid-binding periplasmic protein compare
SMc03889 -0.8 -2.2 transporter compare
SMc02558 -0.8 -2.6 hypothetical protein compare
SMc02695 -0.7 -3.1 GTP-dependent nucleic acid-binding protein EngD compare
SMc03980 -0.7 -3.1 hypothetical protein compare
SMc02448 -0.7 -1.0 mutator protein 7,8-dihydro-8-oxoguanine-triphosphatase compare
SMc01119 -0.7 -1.6 hypothetical protein compare
SMc02407 -0.7 -2.5 hypothetical protein compare
SMc03010 -0.7 -1.4 chemotaxis-specific methylesterase compare
SMc00419 -0.7 -2.1 glutathione synthetase compare
SMc01041 -0.7 -2.1 NIFR3-like protein compare
SMc03930 -0.7 -1.0 sarcosine oxidase subunit gamma compare
SMc02980 -0.7 -1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in carbon source experiments

For carbon source D-Glucose across organisms