Experiment set17IT013 for Pseudomonas stutzeri RCH2

Compare to:

LB with Zinc sulfate heptahydrate 0.12 mM

200 most important genes:

  gene name fitness t score description  
Psest_2304 -3.8 -1.4 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_0498 -3.2 -2.4 ribosome small subunit-dependent GTPase A compare
Psest_2759 -3.0 -9.2 Co/Zn/Cd efflux system component conserved
Psest_3546 -2.9 -1.5 Phosphatidylglycerophosphatase A and related proteins compare
Psest_0725 -2.9 -2.5 Negative regulator of beta-lactamase expression compare
Psest_4406 -2.8 -1.6 hypothetical protein compare
Psest_3910 -2.6 -1.9 Uncharacterized protein conserved in bacteria compare
Psest_0959 -2.5 -2.4 Uncharacterized protein conserved in bacteria compare
Psest_0028 -2.3 -6.3 Coproporphyrinogen III oxidase compare
Psest_0309 -2.3 -1.6 RND family efflux transporter, MFP subunit compare
Psest_1661 -2.2 -1.5 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_2566 -2.2 -1.1 Uncharacterized protein conserved in bacteria compare
Psest_4128 -2.2 -2.0 Universal stress protein UspA and related nucleotide-binding proteins compare
Psest_0737 -2.2 -1.1 Cu(I)-responsive transcriptional regulator compare
Psest_0277 -2.1 -1.7 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Psest_1804 -2.1 -2.0 Superfamily II DNA and RNA helicases compare
Psest_3129 -2.0 -1.4 tyrosine recombinase XerD compare
Psest_1659 -2.0 -2.9 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_2579 -2.0 -5.4 amidophosphoribosyltransferase compare
Psest_1510 -1.9 -3.2 Putative Zn-dependent protease, contains TPR repeats compare
Psest_3212 -1.9 -4.1 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_4010 -1.8 -1.5 peroxiredoxin, OsmC subfamily compare
Psest_3351 -1.8 -6.0 peptide chain release factor 3 compare
Psest_1505 -1.8 -2.0 Organic radical activating enzymes compare
Psest_4243 -1.8 -2.4 type VI secretion lipoprotein, VC_A0113 family compare
Psest_3092 -1.8 -1.7 ribonuclease III, bacterial compare
Psest_1306 -1.8 -1.7 hypothetical protein compare
Psest_0515 -1.7 -4.2 rare lipoprotein A compare
Psest_3938 -1.7 -3.9 Uncharacterized protein conserved in bacteria compare
Psest_0259 -1.7 -1.4 cell division ATP-binding protein FtsE compare
Psest_0442 -1.6 -2.9 ATPases of the AAA+ class compare
Psest_0609 -1.6 -1.5 hypothetical protein compare
Psest_1013 -1.6 -3.3 phosphoribosylamine--glycine ligase compare
Psest_1920 -1.6 -1.1 Uncharacterized protein conserved in bacteria compare
Psest_0186 -1.5 -4.5 Protein-disulfide isomerase compare
Psest_4044 -1.5 -1.8 type I site-specific deoxyribonuclease, HsdR family compare
Psest_1677 -1.5 -2.2 Protein-tyrosine-phosphatase compare
Psest_1814 -1.5 -9.5 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_4078 -1.5 -2.2 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_3100 -1.4 -1.3 RNA polymerase sigma factor RpoE compare
Psest_2651 -1.4 -3.0 DNA topoisomerase I, bacterial compare
Psest_0857 -1.3 -1.4 Membrane transporters of cations and cationic drugs compare
Psest_2764 -1.3 -1.0 hypothetical protein compare
Psest_2975 -1.3 -1.9 tRNA_Arg_CCT compare
Psest_2756 -1.3 -1.1 hypothetical protein compare
Psest_1496 -1.3 -1.1 Holliday junction DNA helicase, RuvA subunit compare
Psest_1905 -1.3 -2.9 Uncharacterized conserved protein, contains double-stranded beta-helix domain compare
Psest_3338 -1.3 -1.1 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_4049 -1.3 -1.5 hypothetical protein compare
Psest_1230 -1.3 -2.3 Uncharacterized protein conserved in bacteria compare
Psest_2775 -1.3 -3.0 Glycerol-3-phosphate dehydrogenase compare
Psest_0740 -1.3 -2.0 Transcriptional regulator compare
Psest_1012 -1.3 -3.2 Signal transduction histidine kinase compare
Psest_2899 -1.2 -1.1 hypothetical protein compare
Psest_3756 -1.2 -2.1 hypothetical protein compare
Psest_2901 -1.2 -1.6 hypothetical protein compare
Psest_2945 -1.2 -1.2 septum site-determining protein MinC compare
Psest_3456 -1.2 -1.4 RNA polymerase sigma factor, sigma-70 family compare
Psest_4371 -1.2 -2.9 Multisubunit Na+/H+ antiporter, MnhB subunit compare
Psest_4095 -1.2 -1.9 Uncharacterized protein conserved in bacteria compare
Psest_2104 -1.2 -0.8 IscR-regulated protein YhgI compare
Psest_3159 -1.2 -4.4 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_2810 -1.2 -3.6 5'/3'-nucleotidase SurE compare
Psest_0164 -1.2 -0.8 Glutaredoxin, GrxC family compare
Psest_0575 -1.2 -0.8 HrpA-like helicases compare
Psest_2772 -1.2 -3.0 MIP family channel proteins compare
Psest_2773 -1.2 -4.6 glycerol kinase compare
Psest_1520 -1.2 -2.4 hypothetical protein compare
Psest_3536 -1.2 -0.9 hypothetical protein compare
Psest_2946 -1.1 -2.6 septum site-determining protein MinD compare
Psest_4170 -1.1 -1.2 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_3115 -1.1 -4.5 electron transport complex, RnfABCDGE type, D subunit compare
Psest_3399 -1.1 -0.9 Uncharacterized protein conserved in bacteria compare
Psest_3937 -1.1 -1.5 ATP-dependent protease HslVU, ATPase subunit compare
Psest_1998 -1.1 -2.2 Entner-Doudoroff aldolase compare
Psest_1660 -1.1 -1.1 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_4196 -1.1 -2.7 Type II secretory pathway, component PulK compare
Psest_3339 -1.1 -3.6 Signal transduction histidine kinase compare
Psest_0133 -1.1 -1.1 type VI secretion protein, VC_A0107 family compare
Psest_2358 -1.1 -1.6 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_4191 -1.1 -2.6 Transcriptional regulator compare
Psest_3535 -1.0 -1.9 hypothetical protein compare
Psest_4363 -1.0 -4.4 ATPases involved in chromosome partitioning compare
Psest_3435 -1.0 -3.7 hypothetical protein compare
Psest_1305 -1.0 -2.0 Heat shock protein compare
Psest_2268 -1.0 -2.4 Alcohol dehydrogenase, class IV compare
Psest_3080 -1.0 -1.0 AraC-type DNA-binding domain-containing proteins compare
Psest_0417 -1.0 -1.8 Acyl-CoA dehydrogenases compare
Psest_2872 -1.0 -1.3 protein RecA compare
Psest_1457 -1.0 -1.4 FOG: Ankyrin repeat compare
Psest_2646 -1.0 -1.6 SOS regulatory protein LexA compare
Psest_0915 -1.0 -3.7 hypothetical protein compare
Psest_2278 -1.0 -2.6 coenzyme PQQ biosynthesis protein PqqD compare
Psest_3458 -1.0 -2.6 hypothetical protein compare
Psest_2324 -1.0 -6.8 hypothetical protein compare
Psest_3013 -1.0 -1.1 cobyrinic acid a,c-diamide synthase compare
Psest_1037 -1.0 -1.8 acetolactate synthase, small subunit compare
Psest_1242 -1.0 -1.9 tRNA-guanine transglycosylase, queuosine-34-forming compare
Psest_3236 -0.9 -2.0 hypothetical protein compare
Psest_3819 -0.9 -1.7 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_3322 -0.9 -6.9 TIGR02099 family protein compare
Psest_3809 -0.9 -2.5 hypothetical protein compare
Psest_0846 -0.9 -1.7 Uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Psest_1158 -0.9 -4.9 Predicted thiol oxidoreductase compare
Psest_2940 -0.9 -2.1 Predicted membrane protein compare
Psest_3484 -0.9 -2.8 nitrate reductase molybdenum cofactor assembly chaperone compare
Psest_2325 -0.9 -3.9 alpha-L-glutamate ligase-related protein compare
Psest_1913 -0.9 -1.7 Transcriptional regulator compare
Psest_1752 -0.9 -1.2 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB compare
Psest_3112 -0.9 -2.5 electron transport complex, RnfABCDGE type, A subunit compare
Psest_1824 -0.9 -1.8 Sugar transferases involved in lipopolysaccharide synthesis compare
Psest_2253 -0.9 -1.2 small redox-active disulfide protein 2 compare
Psest_0174 -0.9 -3.5 Uncharacterized protein conserved in bacteria compare
Psest_3767 -0.9 -2.2 tyrosine recombinase XerC compare
Psest_2460 -0.9 -1.0 hypothetical protein compare
Psest_1709 -0.9 -1.7 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_2850 -0.9 -0.9 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_1724 -0.9 -1.9 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_0795 -0.9 -2.4 ABC-type multidrug transport system, ATPase component compare
Psest_2714 -0.9 -1.3 7-cyano-7-deazaguanine reductase compare
Psest_2442 -0.9 -1.3 hypothetical protein compare
Psest_0958 -0.9 -3.0 Oligoketide cyclase/lipid transport protein compare
Psest_1261 -0.9 -3.1 Uncharacterized protein conserved in bacteria compare
Psest_1656 -0.9 -1.3 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_3247 -0.9 -0.7 Uncharacterized membrane protein compare
Psest_1157 -0.9 -4.1 Predicted periplasmic lipoprotein compare
Psest_1089 -0.8 -2.1 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_1227 -0.8 -1.6 Predicted SAM-dependent methyltransferase compare
Psest_3123 -0.8 -1.1 dihydroorotase, homodimeric type compare
Psest_1185 -0.8 -1.6 heavy metal response regulator compare
Psest_0514 -0.8 -2.9 lytic murein transglycosylase B compare
Psest_3824 -0.8 -2.0 Predicted membrane protein compare
Psest_1947 -0.8 -0.6 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_2001 -0.8 -0.9 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_3177 -0.8 -0.9 hypothetical protein compare
Psest_3502 -0.8 -1.4 flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family compare
Psest_1474 -0.8 -1.4 phosphoribosylaminoimidazole synthetase compare
Psest_2585 -0.8 -0.6 pseudouridylate synthase I compare
Psest_3114 -0.8 -3.8 electron transport complex, RnfABCDGE type, C subunit compare
Psest_2953 -0.8 -1.1 Histone acetyltransferase compare
Psest_3810 -0.8 -0.7 orotate phosphoribosyltransferase compare
Psest_0257 -0.8 -1.8 Predicted Zn-dependent peptidases compare
Psest_1293 -0.8 -0.9 VanZ like family. compare
Psest_0401 -0.8 -1.9 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_0511 -0.8 -1.0 rRNA large subunit m3Psi methyltransferase RlmH compare
Psest_3790 -0.8 -4.1 Cytochrome c5 compare
Psest_3146 -0.8 -0.8 hypothetical protein compare
Psest_3168 -0.8 -1.3 Molybdopterin converting factor, large subunit compare
Psest_1456 -0.8 -2.3 Protein of unknown function (DUF2892). compare
Psest_3998 -0.8 -3.2 glutamate--cysteine ligase compare
Psest_2766 -0.8 -0.6 hypothetical protein compare
Psest_0237 -0.8 -1.3 intracellular protease, PfpI family compare
Psest_0013 -0.8 -2.9 Lauroyl/myristoyl acyltransferase compare
Psest_3862 -0.8 -5.0 phosphoenolpyruvate-protein phosphotransferase compare
Psest_2446 -0.8 -1.4 acetyl-CoA acetyltransferases compare
Psest_0145 -0.8 -2.0 A/G-specific adenine glycosylase compare
Psest_2711 -0.7 -1.5 PilZ domain. compare
Psest_2999 -0.7 -2.4 molybdenum ABC transporter, periplasmic molybdate-binding protein compare
Psest_1665 -0.7 -1.5 hypothetical protein compare
Psest_0520 -0.7 -0.4 hypothetical protein compare
Psest_2682 -0.7 -2.2 fumarate hydratase, class II compare
Psest_1704 -0.7 -0.8 Dehydrogenases (flavoproteins) compare
Psest_1813 -0.7 -4.4 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_4315 -0.7 -1.6 ABC-type metal ion transport system, permease component compare
Psest_2057 -0.7 -2.6 Predicted secreted protein compare
Psest_0998 -0.7 -1.3 poly(A) polymerase compare
Psest_4067 -0.7 -1.3 Predicted membrane protein compare
Psest_2786 -0.7 -0.6 Domain of unknown function (DUF3597). compare
Psest_1617 -0.7 -1.4 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_2067 -0.7 -0.6 ABC-type oligopeptide transport system, periplasmic component compare
Psest_1663 -0.7 -1.5 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_3331 -0.7 -1.8 rare lipoprotein A compare
Psest_2668 -0.7 -1.9 Lactoylglutathione lyase and related lyases compare
Psest_3185 -0.7 -0.9 MoxR-like ATPases compare
Psest_0165 -0.7 -1.8 protein-export chaperone SecB compare
Psest_3754 -0.7 -1.5 Uncharacterized protein involved in response to NO compare
Psest_4021 -0.7 -2.3 hypothetical protein compare
Psest_2264 -0.7 -3.1 RND family efflux transporter, MFP subunit compare
Psest_3306 -0.7 -2.0 conserved hypothetical integral membrane protein compare
Psest_2768 -0.7 -1.2 Kef-type K+ transport systems, predicted NAD-binding component compare
Psest_1595 -0.7 -0.7 Copper chaperone compare
Psest_1582 -0.7 -1.5 Protein of unknown function (DUF3087). compare
Psest_2218 -0.7 -1.2 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit compare
Psest_1681 -0.7 -2.1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E compare
Psest_0869 -0.7 -1.4 Acetyltransferase (isoleucine patch superfamily) compare
Psest_0516 -0.7 -3.0 D-alanyl-D-alanine carboxypeptidase compare
Psest_1886 -0.7 -2.4 Uncharacterized protein conserved in bacteria compare
Psest_0508 -0.7 -2.7 gamma-glutamyl phosphate reductase compare
Psest_2229 -0.7 -0.9 Uncharacterized protein conserved in bacteria compare
Psest_1295 -0.7 -2.8 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_0292 -0.7 -1.5 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase compare
Psest_0844 -0.7 -2.1 High-affinity Fe2+/Pb2+ permease compare
Psest_0363 -0.7 -2.4 tripartite ATP-independent periplasmic transporter solute receptor, DctP family compare
Psest_1522 -0.6 -1.1 hypothetical protein compare
Psest_0843 -0.6 -3.4 hypothetical protein compare
Psest_0613 -0.6 -2.8 hypothetical protein compare
Psest_3522 -0.6 -1.6 3-hydroxybutyrate dehydrogenase compare
Psest_1535 -0.6 -2.2 FKBP-type peptidyl-prolyl cis-trans isomerases 1 compare
Psest_0691 -0.6 -4.3 ribonuclease R compare
Psest_3896 -0.6 -1.4 arsenite-activated ATPase ArsA compare


Specific Phenotypes

For 1 genes in this experiment

For stress Zinc sulfate heptahydrate in Pseudomonas stutzeri RCH2

For stress Zinc sulfate heptahydrate across organisms