Experiment set17IT011 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_1percent_glucose with Sodium Chloride 200 mM and Betaine 100 uM

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -9.5 -5.6 histidinol-phosphate transaminase compare
BWI76_RS18950 -6.7 -5.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS20965 -6.5 -3.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS05840 -6.4 -6.3 glutamate 5-kinase compare
BWI76_RS04645 -6.3 -4.3 3-dehydroquinase compare
BWI76_RS18940 -5.9 -4.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04250 -5.8 -7.1 homoserine kinase compare
BWI76_RS25115 -5.5 -8.9 argininosuccinate synthase compare
BWI76_RS20355 -5.4 -3.2 colicin V production protein compare
BWI76_RS02995 -5.4 -6.4 aspartate carbamoyltransferase compare
BWI76_RS04470 -5.1 -9.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS09760 -5.0 -5.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS18920 -5.0 -4.0 ATP phosphoribosyltransferase compare
BWI76_RS27385 -4.9 -4.8 orotate phosphoribosyltransferase compare
BWI76_RS05835 -4.9 -4.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS00855 -4.9 -8.4 argininosuccinate lyase compare
BWI76_RS09755 -4.8 -6.5 phosphoserine transaminase compare
BWI76_RS00850 -4.7 -7.4 acetylglutamate kinase compare
BWI76_RS03010 -4.7 -7.6 ornithine carbamoyltransferase compare
BWI76_RS11860 -4.7 -7.9 anthranilate synthase component I compare
BWI76_RS23220 -4.6 -8.7 amino-acid N-acetyltransferase compare
BWI76_RS26085 -4.6 -2.7 3-dehydroquinate synthase compare
BWI76_RS04465 -4.6 -5.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS21475 -4.5 -4.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS00845 -4.4 -9.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11850 -4.4 -10.2 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00980 -4.3 -9.6 PLP-dependent threonine dehydratase compare
BWI76_RS04670 -4.2 -8.6 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04255 -4.2 -10.7 threonine synthase compare
BWI76_RS00990 -4.2 -8.2 ketol-acid reductoisomerase compare
BWI76_RS01655 -4.2 -10.9 homoserine O-succinyltransferase compare
BWI76_RS23920 -4.1 -7.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS24285 -4.1 -5.1 cystathionine beta-lyase compare
BWI76_RS18955 -4.0 -3.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18935 -4.0 -10.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00835 -4.0 -12.5 phosphoenolpyruvate carboxylase compare
BWI76_RS00805 -3.9 -4.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS01615 -3.9 -7.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS11965 -3.9 -2.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS11845 -3.8 -2.6 tryptophan synthase subunit beta compare
BWI76_RS09645 -3.8 -1.3 thioredoxin-disulfide reductase compare
BWI76_RS23365 -3.7 -9.9 LysR family transcriptional regulator compare
BWI76_RS00975 -3.7 -8.5 dihydroxy-acid dehydratase compare
BWI76_RS11855 -3.7 -7.5 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS04665 -3.7 -17.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS18925 -3.7 -4.4 histidinol dehydrogenase compare
BWI76_RS17720 -3.7 -1.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS23360 -3.7 -2.7 diaminopimelate decarboxylase compare
BWI76_RS27390 -3.7 -4.3 ribonuclease PH compare
BWI76_RS04240 -3.6 -2.7 thr operon leader peptide compare
BWI76_RS00785 -3.6 -5.5 cystathionine gamma-synthase compare
BWI76_RS20995 -3.6 -4.3 RNA degradosome polyphosphate kinase compare
BWI76_RS20350 -3.5 -4.3 amidophosphoribosyltransferase compare
BWI76_RS21265 -3.5 -8.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS11840 -3.5 -2.9 tryptophan synthase subunit alpha compare
BWI76_RS20895 -3.4 -4.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04245 -3.3 -12.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS25645 -3.2 -7.7 shikimate dehydrogenase compare
BWI76_RS09910 -3.2 -13.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS05015 -3.2 -3.0 transcriptional regulator compare
BWI76_RS04675 -3.2 -5.3 3-isopropylmalate dehydrogenase compare
BWI76_RS00985 -3.2 -7.8 transcriptional regulator IlvY compare
BWI76_RS07070 -3.1 -3.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS22755 -3.1 -5.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS22760 -3.0 -7.5 sulfite reductase subunit beta compare
BWI76_RS01610 -3.0 -4.6 phosphoribosylamine--glycine ligase compare
BWI76_RS13820 -3.0 -2.0 hypothetical protein compare
BWI76_RS07065 -2.9 -7.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04160 -2.9 -2.7 phosphoserine phosphatase compare
BWI76_RS04685 -2.8 -9.4 putative leucine operon leader peptide compare
BWI76_RS20435 -2.8 -1.4 chorismate synthase compare
BWI76_RS00180 -2.7 -1.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS01800 -2.7 -4.6 glucose-6-phosphate isomerase compare
BWI76_RS26000 -2.7 -6.5 aspartate aminotransferase family protein compare
BWI76_RS25335 -2.7 -3.7 stringent starvation protein A compare
BWI76_RS22765 -2.6 -7.8 sulfite reductase subunit alpha compare
BWI76_RS21465 -2.6 -2.7 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS25315 -2.5 -8.9 glutamate synthase large subunit compare
BWI76_RS10990 -2.5 -2.5 dihydroorotase compare
BWI76_RS04680 -2.5 -8.1 2-isopropylmalate synthase compare
BWI76_RS20360 -2.5 -1.7 cell division protein DedD compare
BWI76_RS00345 -2.4 -4.2 protein disulfide oxidoreductase DsbA compare
BWI76_RS18360 -2.3 -1.8 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS13480 -2.3 -1.6 XRE family transcriptional regulator compare
BWI76_RS20490 -2.3 -1.6 hypothetical protein compare
BWI76_RS09190 -2.3 -2.7 hypothetical protein compare
BWI76_RS25320 -2.3 -7.0 glutamate synthase compare
BWI76_RS01200 -2.3 -2.1 diaminopimelate epimerase compare
BWI76_RS08385 -2.3 -2.6 citrate (Si)-synthase compare
BWI76_RS03660 -2.1 -4.0 hypothetical protein compare
BWI76_RS00965 -2.1 -1.4 acetolactate synthase 2 small subunit compare
BWI76_RS02735 -2.1 -4.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS22850 -2.0 -3.1 tRNA pseudouridine synthase TruC compare
BWI76_RS15975 -1.9 -1.5 hypothetical protein compare
BWI76_RS00960 -1.9 -4.3 acetolactate synthase 2 catalytic subunit compare
BWI76_RS05915 -1.9 -3.1 helix-turn-helix transcriptional regulator compare
BWI76_RS07185 -1.8 -1.7 hypothetical protein compare
BWI76_RS24110 -1.8 -2.5 YggU family protein compare
BWI76_RS12885 -1.8 -3.0 hypothetical protein compare
BWI76_RS01330 -1.8 -3.9 twin-arginine translocase subunit TatC compare
BWI76_RS12335 -1.7 -4.1 hypothetical protein compare
BWI76_RS16955 -1.7 -0.8 hypothetical protein compare
BWI76_RS14410 -1.7 -1.4 hypothetical protein compare
BWI76_RS01275 -1.7 -6.9 LysR family transcriptional regulator compare
BWI76_RS15825 -1.7 -3.2 hypothetical protein compare
BWI76_RS26055 -1.7 -3.8 siroheme synthase compare
BWI76_RS19330 -1.7 -1.4 HAD family hydrolase compare
BWI76_RS01350 -1.7 -1.2 NAD(P)H-flavin reductase compare
BWI76_RS11610 -1.6 -3.0 glutamate dehydrogenase compare
BWI76_RS14325 -1.6 -2.6 maturase compare
BWI76_RS16240 -1.6 -1.7 anti-adapter protein IraM compare
BWI76_RS22690 -1.6 -2.3 adenylyl-sulfate kinase compare
BWI76_RS00400 -1.5 -0.9 glutamine synthetase compare
BWI76_RS07475 -1.5 -1.3 DNA-binding transcriptional regulator RamA compare
BWI76_RS22805 -1.5 -7.0 GTP diphosphokinase compare
BWI76_RS01545 -1.5 -2.4 thiamine biosynthesis protein ThiS compare
BWI76_RS16200 -1.5 -1.2 NAD(P) transhydrogenase subunit beta compare
BWI76_RS20640 -1.4 -4.7 cysteine synthase A compare
BWI76_RS20440 -1.4 -1.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS17980 -1.4 -2.8 RNA chaperone ProQ compare
BWI76_RS16920 -1.4 -1.9 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS22695 -1.4 -4.2 sulfate adenylyltransferase compare
BWI76_RS21075 -1.4 -2.0 membrane protein compare
BWI76_RS04510 -1.3 -1.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS09255 -1.3 -1.7 hypothetical protein compare
BWI76_RS04955 -1.3 -0.9 hypoxanthine phosphoribosyltransferase compare
BWI76_RS21340 -1.3 -2.4 SoxR reducing system protein RseC compare
BWI76_RS09470 -1.2 -1.2 putrescine ABC transporter permease compare
BWI76_RS13785 -1.2 -1.5 ABC transporter permease compare
BWI76_RS12485 -1.2 -1.8 TyrR family transcriptional regulator compare
BWI76_RS21070 -1.2 -1.0 outer membrane protein assembly factor BamB compare
BWI76_RS15850 -1.2 -2.3 DUF1317 domain-containing protein compare
BWI76_RS15830 -1.1 -2.3 hypothetical protein compare
BWI76_RS16555 -1.1 -1.9 hypothetical protein compare
BWI76_RS09635 -1.1 -1.3 amino acid ABC transporter ATP-binding protein compare
BWI76_RS15360 -1.1 -1.7 hypothetical protein compare
BWI76_RS07510 -1.1 -1.8 hypothetical protein compare
BWI76_RS20230 -1.1 -1.5 hypothetical protein compare
BWI76_RS02530 -1.1 -1.0 tRNA dimethylallyltransferase compare
BWI76_RS26570 -1.1 -1.5 anion permease compare
BWI76_RS20155 -1.1 -2.0 NADH-quinone oxidoreductase subunit I compare
BWI76_RS26440 -1.1 -1.2 hypothetical protein compare
BWI76_RS24885 -1.1 -1.3 PTS galactitol transporter subunit IIB compare
BWI76_RS19495 -1.0 -1.0 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS25000 -1.0 -1.2 malonate decarboxylase acyl carrier protein compare
BWI76_RS02050 -1.0 -1.8 CidA/LrgA family protein compare
BWI76_RS08705 -1.0 -2.1 putative LuxR family regulatory protein compare
BWI76_RS14065 -1.0 -1.4 hypothetical protein compare
BWI76_RS09440 -1.0 -1.7 hypothetical protein compare
BWI76_RS24575 -1.0 -1.1 hypothetical protein compare
BWI76_RS09195 -1.0 -1.4 N-acetyltransferase compare
BWI76_RS10625 -1.0 -4.3 hypothetical protein compare
BWI76_RS08580 -1.0 -2.4 quinolinate synthetase compare
BWI76_RS05655 -1.0 -2.3 hypothetical protein compare
BWI76_RS20650 -1.0 -0.7 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS13220 -1.0 -2.0 N-acetyltransferase compare
BWI76_RS06325 -1.0 -2.3 hypothetical protein compare
BWI76_RS22420 -1.0 -1.7 LacI family transcriptional regulator compare
BWI76_RS19870 -0.9 -2.3 malate:quinone oxidoreductase compare
BWI76_RS16120 -0.9 -1.7 4-carboxymuconolactone decarboxylase compare
BWI76_RS21480 -0.9 -2.4 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS10535 -0.9 -2.3 Asp/Glu/hydantoin racemase compare
BWI76_RS10310 -0.9 -2.6 DNA-binding transcriptional regulator RamA compare
BWI76_RS10700 -0.9 -1.7 XRE family transcriptional regulator compare
BWI76_RS05450 -0.9 -0.6 ribonuclease HI compare
BWI76_RS10035 -0.9 -0.9 hypothetical protein compare
BWI76_RS17110 -0.9 -1.4 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS06075 -0.9 -2.1 taurine transporter subunit compare
BWI76_RS19145 -0.9 -1.5 formate dehydrogenase cytochrome b556 subunit compare
BWI76_RS17300 -0.9 -0.6 tRNA-Tyr compare
BWI76_RS18190 -0.9 -2.5 carboxy-S-adenosyl-L-methionine synthase CmoA compare
BWI76_RS08530 -0.9 -1.3 protein TolA compare
BWI76_RS06185 -0.9 -3.1 shikimate kinase II compare
BWI76_RS15760 -0.9 -1.0 hypothetical protein compare
BWI76_RS20705 -0.9 -3.1 thiosulfate transporter subunit compare
BWI76_RS23005 -0.9 -1.6 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS12390 -0.8 -1.1 antibiotic biosynthesis monooxygenase compare
BWI76_RS16490 -0.8 -1.5 glutaredoxin compare
BWI76_RS14780 -0.8 -1.9 phosphotriesterase compare
BWI76_RS12755 -0.8 -2.5 hypothetical protein compare
BWI76_RS27875 -0.8 -0.7 membrane protein compare
BWI76_RS04525 -0.8 -1.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS18470 -0.8 -1.3 hypothetical protein compare
BWI76_RS12605 -0.8 -1.5 hypothetical protein compare
BWI76_RS20970 -0.8 -1.0 phosphoribosylglycinamide formyltransferase compare
BWI76_RS21570 -0.8 -1.2 RnfH family protein compare
BWI76_RS11895 -0.8 -2.1 AraC family transcriptional regulator compare
BWI76_RS18455 -0.8 -0.9 tRNA-Ser compare
BWI76_RS15435 -0.8 -0.9 hypothetical protein compare
BWI76_RS13715 -0.8 -2.1 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit compare
BWI76_RS23760 -0.8 -1.2 tRNA-Gly compare
BWI76_RS23215 -0.8 -2.0 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS11810 -0.8 -1.0 outer membrane protein OmpW compare
BWI76_RS09250 -0.8 -2.4 hypothetical protein compare
BWI76_RS13730 -0.8 -1.6 hypothetical protein compare
BWI76_RS20150 -0.8 -1.2 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS23670 -0.8 -2.4 alkaline phosphatase compare
BWI76_RS03380 -0.8 -3.9 hypothetical protein compare
BWI76_RS06805 -0.8 -1.2 primosomal replication protein N'' compare
BWI76_RS04605 -0.8 -1.0 thiamine ABC transporter ATP-binding protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in stress experiments

For stress Sodium Chloride across organisms