Experiment set17IT010 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_1percent_glucose with Sodium Chloride 100 mM and Betaine 100 uM

200 most important genes:

  gene name fitness t score description  
BWI76_RS03010 -6.0 -9.7 ornithine carbamoyltransferase compare
BWI76_RS01610 -5.8 -8.8 phosphoribosylamine--glycine ligase compare
BWI76_RS20895 -5.5 -3.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00785 -5.5 -8.2 cystathionine gamma-synthase compare
BWI76_RS00990 -5.5 -9.9 ketol-acid reductoisomerase compare
BWI76_RS24285 -5.2 -8.1 cystathionine beta-lyase compare
BWI76_RS05840 -5.2 -4.8 glutamate 5-kinase compare
BWI76_RS21475 -5.2 -8.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18935 -5.1 -6.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS23365 -5.1 -7.8 LysR family transcriptional regulator compare
BWI76_RS07070 -5.1 -3.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00985 -5.0 -10.0 transcriptional regulator IlvY compare
BWI76_RS20350 -4.9 -6.1 amidophosphoribosyltransferase compare
BWI76_RS00980 -4.8 -9.8 PLP-dependent threonine dehydratase compare
BWI76_RS04470 -4.7 -9.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS11965 -4.7 -3.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS00805 -4.7 -4.9 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00850 -4.6 -7.4 acetylglutamate kinase compare
BWI76_RS04665 -4.6 -20.5 3-isopropylmalate dehydratase small subunit compare
BWI76_RS18955 -4.6 -4.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS01350 -4.6 -1.6 NAD(P)H-flavin reductase compare
BWI76_RS26085 -4.6 -2.6 3-dehydroquinate synthase compare
BWI76_RS23360 -4.5 -4.6 diaminopimelate decarboxylase compare
BWI76_RS04675 -4.5 -8.0 3-isopropylmalate dehydrogenase compare
BWI76_RS25645 -4.4 -9.0 shikimate dehydrogenase compare
BWI76_RS02995 -4.4 -5.9 aspartate carbamoyltransferase compare
BWI76_RS11860 -4.4 -8.8 anthranilate synthase component I compare
BWI76_RS18930 -4.3 -4.5 histidinol-phosphate transaminase compare
BWI76_RS18950 -4.3 -5.4 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00975 -4.3 -11.1 dihydroxy-acid dehydratase compare
BWI76_RS18940 -4.3 -3.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04670 -4.2 -9.0 3-isopropylmalate dehydratase large subunit compare
BWI76_RS09755 -4.2 -5.5 phosphoserine transaminase compare
BWI76_RS11840 -4.2 -6.9 tryptophan synthase subunit alpha compare
BWI76_RS01655 -4.2 -6.7 homoserine O-succinyltransferase compare
BWI76_RS25115 -4.2 -6.1 argininosuccinate synthase compare
BWI76_RS20355 -4.2 -2.5 colicin V production protein compare
BWI76_RS04465 -4.1 -3.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00845 -4.1 -9.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS23220 -4.1 -5.4 amino-acid N-acetyltransferase compare
BWI76_RS22765 -4.0 -12.8 sulfite reductase subunit alpha compare
BWI76_RS04645 -4.0 -5.8 3-dehydroquinase compare
BWI76_RS00835 -4.0 -11.6 phosphoenolpyruvate carboxylase compare
BWI76_RS11845 -4.0 -2.7 tryptophan synthase subunit beta compare
BWI76_RS04255 -4.0 -7.4 threonine synthase compare
BWI76_RS05835 -3.9 -3.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS10990 -3.9 -2.1 dihydroorotase compare
BWI76_RS00855 -3.9 -8.0 argininosuccinate lyase compare
BWI76_RS09645 -3.9 -1.3 thioredoxin-disulfide reductase compare
BWI76_RS23920 -3.9 -7.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09760 -3.8 -3.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04250 -3.8 -8.6 homoserine kinase compare
BWI76_RS11855 -3.8 -8.3 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS18920 -3.7 -4.7 ATP phosphoribosyltransferase compare
BWI76_RS01615 -3.7 -7.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS27385 -3.7 -7.1 orotate phosphoribosyltransferase compare
BWI76_RS01800 -3.7 -5.5 glucose-6-phosphate isomerase compare
BWI76_RS11850 -3.7 -10.1 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS20965 -3.7 -2.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04245 -3.7 -13.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04685 -3.7 -12.7 putative leucine operon leader peptide compare
BWI76_RS22760 -3.6 -7.1 sulfite reductase subunit beta compare
BWI76_RS04160 -3.4 -5.1 phosphoserine phosphatase compare
BWI76_RS16955 -3.4 -1.2 hypothetical protein compare
BWI76_RS26055 -3.3 -5.0 siroheme synthase compare
BWI76_RS02735 -3.1 -5.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS04680 -3.1 -9.1 2-isopropylmalate synthase compare
BWI76_RS18925 -3.1 -7.4 histidinol dehydrogenase compare
BWI76_RS21465 -3.0 -2.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS09910 -3.0 -11.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS07065 -3.0 -3.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS07985 -3.0 -1.7 fluoride ion transporter CrcB compare
BWI76_RS20435 -2.9 -1.3 chorismate synthase compare
BWI76_RS26000 -2.7 -4.0 aspartate aminotransferase family protein compare
BWI76_RS21265 -2.6 -6.3 phosphoribosylformylglycinamidine synthase compare
BWI76_RS05015 -2.6 -2.5 transcriptional regulator compare
BWI76_RS23885 -2.5 -1.7 2-octaprenylphenol hydroxylase compare
BWI76_RS20995 -2.5 -2.5 RNA degradosome polyphosphate kinase compare
BWI76_RS15660 -2.5 -1.4 hypothetical protein compare
BWI76_RS22805 -2.4 -9.9 GTP diphosphokinase compare
BWI76_RS25320 -2.4 -8.7 glutamate synthase compare
BWI76_RS12070 -2.3 -1.6 hypothetical protein compare
BWI76_RS08385 -2.3 -3.7 citrate (Si)-synthase compare
BWI76_RS25315 -2.3 -10.6 glutamate synthase large subunit compare
BWI76_RS27390 -2.3 -3.2 ribonuclease PH compare
BWI76_RS01200 -2.2 -2.1 diaminopimelate epimerase compare
BWI76_RS13820 -2.1 -2.4 hypothetical protein compare
BWI76_RS22755 -2.1 -6.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS16240 -2.1 -1.5 anti-adapter protein IraM compare
BWI76_RS04510 -2.0 -1.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS12090 -2.0 -3.6 HNH endonuclease compare
BWI76_RS22125 -2.0 -1.9 membrane protein compare
BWI76_RS22690 -2.0 -3.9 adenylyl-sulfate kinase compare
BWI76_RS16360 -1.9 -1.7 electron transport complex subunit RsxB compare
BWI76_RS21140 -1.8 -2.1 molecular chaperone HscA compare
BWI76_RS27875 -1.7 -1.8 membrane protein compare
BWI76_RS00140 -1.6 -0.8 phosphate transport system regulator PhoU compare
BWI76_RS20640 -1.6 -5.0 cysteine synthase A compare
BWI76_RS13755 -1.6 -1.6 hypothetical protein compare
BWI76_RS01275 -1.6 -4.4 LysR family transcriptional regulator compare
BWI76_RS15825 -1.6 -2.3 hypothetical protein compare
BWI76_RS11675 -1.5 -2.8 arginine N-succinyltransferase compare
BWI76_RS00400 -1.4 -0.8 glutamine synthetase compare
BWI76_RS04240 -1.4 -0.6 thr operon leader peptide compare
BWI76_RS15830 -1.4 -2.7 hypothetical protein compare
BWI76_RS22700 -1.4 -5.4 sulfate adenylyltransferase subunit 2 compare
BWI76_RS19330 -1.4 -1.2 HAD family hydrolase compare
BWI76_RS00180 -1.3 -1.4 F0F1 ATP synthase subunit epsilon compare
BWI76_RS17110 -1.3 -1.9 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS00960 -1.3 -4.5 acetolactate synthase 2 catalytic subunit compare
BWI76_RS23915 -1.3 -2.3 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS20440 -1.3 -1.1 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS21480 -1.3 -3.1 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS15195 -1.3 -1.8 DUF4186 domain-containing protein compare
BWI76_RS10310 -1.2 -3.7 DNA-binding transcriptional regulator RamA compare
BWI76_RS17720 -1.2 -0.8 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS27820 -1.2 -1.6 ilvB operon leader peptide IvbL compare
BWI76_RS22485 -1.2 -2.3 hypothetical protein compare
BWI76_RS08580 -1.2 -3.7 quinolinate synthetase compare
BWI76_RS00345 -1.2 -2.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS24100 -1.2 -2.5 YggS family pyridoxal phosphate enzyme compare
BWI76_RS15835 -1.2 -1.0 hypothetical protein compare
BWI76_RS02725 -1.1 -0.9 HxlR family transcriptional regulator compare
BWI76_RS14325 -1.1 -2.6 maturase compare
BWI76_RS00965 -1.1 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS09655 -1.1 -2.6 leucine-responsive regulatory protein compare
BWI76_RS11430 -1.1 -1.0 lipoprotein compare
BWI76_RS06015 -1.1 -1.5 hypothetical protein compare
BWI76_RS25425 -1.1 -1.3 arginine repressor compare
BWI76_RS18580 -1.1 -1.8 hypothetical protein compare
BWI76_RS22695 -1.1 -3.6 sulfate adenylyltransferase compare
BWI76_RS10400 -1.1 -1.5 hypothetical protein compare
BWI76_RS14305 -1.1 -1.8 metallophosphoesterase compare
BWI76_RS07160 -1.1 -3.2 MBL fold hydrolase compare
BWI76_RS12040 -1.1 -1.1 hypothetical protein compare
BWI76_RS23240 -1.1 -0.7 exonuclease V subunit gamma compare
BWI76_RS16375 -1.0 -1.5 electron transport complex subunit G compare
BWI76_RS21570 -1.0 -1.5 RnfH family protein compare
BWI76_RS23760 -1.0 -1.4 tRNA-Gly compare
BWI76_RS20650 -1.0 -0.7 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS17975 -1.0 -3.6 tail-specific protease compare
BWI76_RS19840 -1.0 -1.1 hypothetical protein compare
BWI76_RS02810 -1.0 -2.7 sugar ABC transporter permease YjfF compare
BWI76_RS25335 -1.0 -2.2 stringent starvation protein A compare
BWI76_RS19690 -1.0 -1.0 LysR family transcriptional regulator compare
BWI76_RS02800 -1.0 -3.3 ABC transporter compare
BWI76_RS18140 -0.9 -1.9 zinc ABC transporter permease compare
BWI76_RS21285 -0.9 -1.4 HAD family hydrolase compare
BWI76_RS13345 -0.9 -4.0 DUF3313 domain-containing protein compare
BWI76_RS11820 -0.9 -1.0 short-chain dehydrogenase/reductase SDR compare
BWI76_RS04605 -0.9 -1.1 thiamine ABC transporter ATP-binding protein compare
BWI76_RS04060 -0.9 -1.8 hypothetical protein compare
BWI76_RS22855 -0.9 -1.3 hypothetical protein compare
BWI76_RS14300 -0.9 -2.2 hypothetical protein compare
BWI76_RS20795 -0.9 -1.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS09315 -0.9 -1.1 hypothetical protein compare
BWI76_RS15000 -0.9 -2.4 amino acid ABC transporter ATP-binding protein compare
BWI76_RS18770 -0.9 -0.8 DNA gyrase inhibitor compare
BWI76_RS14350 -0.9 -2.8 hypothetical protein compare
BWI76_RS11735 -0.9 -2.7 PTS N,N'-diacetylchitobiose transporter subunit IIA compare
BWI76_RS21980 -0.9 -1.5 hypothetical protein compare
BWI76_RS11410 -0.9 -1.2 leucine efflux protein compare
BWI76_RS09470 -0.9 -2.2 putrescine ABC transporter permease compare
BWI76_RS27430 -0.9 -0.7 (p)ppGpp synthetase compare
BWI76_RS03040 -0.9 -2.3 leucyl aminopeptidase compare
BWI76_RS20230 -0.9 -1.1 hypothetical protein compare
BWI76_RS15680 -0.9 -2.2 hypothetical protein compare
BWI76_RS12860 -0.8 -1.5 hypothetical protein compare
BWI76_RS18165 -0.8 -1.0 NUDIX pyrophosphatase compare
BWI76_RS17470 -0.8 -1.5 MerR family transcriptional regulator compare
BWI76_RS06765 -0.8 -2.2 transcriptional regulator compare
BWI76_RS09190 -0.8 -1.9 hypothetical protein compare
BWI76_RS11125 -0.8 -1.0 metal-dependent hydrolase compare
BWI76_RS08275 -0.8 -1.1 LexA regulated protein compare
BWI76_RS22640 -0.8 -1.6 hypothetical protein compare
BWI76_RS21780 -0.8 -1.9 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS12345 -0.8 -1.5 nitrite transporter compare
BWI76_RS01545 -0.8 -1.6 thiamine biosynthesis protein ThiS compare
BWI76_RS16920 -0.8 -1.3 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS11600 -0.8 -1.8 selenide, water dikinase SelD compare
BWI76_RS17290 -0.8 -1.6 formyltetrahydrofolate deformylase compare
BWI76_RS21000 -0.8 -2.5 exopolyphosphatase compare
BWI76_RS04050 -0.8 -1.8 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS13050 -0.8 -1.4 transcriptional regulator compare
BWI76_RS09615 -0.8 -1.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS15410 -0.7 -1.6 N-acetyltransferase compare
BWI76_RS04715 -0.7 -0.6 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS20490 -0.7 -1.1 hypothetical protein compare
BWI76_RS20970 -0.7 -0.9 phosphoribosylglycinamide formyltransferase compare
BWI76_RS15840 -0.7 -2.1 prophage protein compare
BWI76_RS02655 -0.7 -1.4 hypothetical protein compare
BWI76_RS14075 -0.7 -1.0 TetR family transcriptional regulator compare
BWI76_RS22265 -0.7 -2.5 NADH:flavorubredoxin oxidoreductase compare
BWI76_RS17525 -0.7 -1.0 XshC-Cox1-family protein compare
BWI76_RS20705 -0.7 -2.9 thiosulfate transporter subunit compare
BWI76_RS07185 -0.7 -0.8 hypothetical protein compare
BWI76_RS07230 -0.7 -1.8 transcriptional regulator compare
BWI76_RS15535 -0.7 -1.7 hypothetical protein compare
BWI76_RS11235 -0.7 -0.7 hypothetical protein compare
BWI76_RS04305 -0.7 -0.8 molecular chaperone DnaJ compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in stress experiments

For stress Sodium Chloride across organisms