Experiment set16S671 for Pseudomonas syringae pv. syringae B728a

Compare to:

Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant

200 most important genes:

  gene name fitness t score description  
Psyr_1613 -3.3 -2.3 septum site-determining protein MinC compare
Psyr_4418 -3.1 -3.0 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_4754 -2.9 -2.3 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0630 -2.5 -7.2 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
Psyr_4687 -2.5 -12.5 biotin synthase compare
Psyr_1140 -2.4 -4.6 Disulfide bond formation protein DsbB compare
Psyr_4684 -2.3 -4.5 biotin synthesis protein BioC compare
Psyr_3202 -2.2 -2.0 NADH dehydrogenase subunit G compare
Psyr_4270 -2.0 -6.9 serine hydroxymethyltransferase compare
Psyr_0454 -1.8 -7.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3954 -1.7 -5.0 GTP-binding protein LepA compare
Psyr_0025 -1.7 -1.6 shikimate dehydrogenase compare
Psyr_4786 -1.7 -2.2 hypothetical protein compare
Psyr_4686 -1.7 -6.9 8-amino-7-oxononanoate synthase compare
Psyr_4683 -1.7 -5.0 dethiobiotin synthase compare
Psyr_3013 -1.6 -1.1 magnesium chelatase subunit ChlD compare
Psyr_5067 -1.6 -3.5 conserved hypothetical protein compare
Psyr_1410 -1.6 -3.3 Holliday junction DNA helicase RuvB compare
Psyr_3672 -1.6 -2.9 cobalamin-5'-phosphate synthase compare
Psyr_1418 -1.6 -2.3 Radical SAM compare
Psyr_1747 -1.5 -4.8 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_1379 -1.5 -2.7 Regulatory protein RecX compare
Psyr_4627 -1.5 -1.9 dimethyladenosine transferase compare
Psyr_0976 -1.5 -3.4 Malate:quinone-oxidoreductase compare
Psyr_3676 -1.5 -3.8 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_1588 -1.4 -3.1 Putative exonuclease, RdgC compare
Psyr_1907 -1.4 -2.2 GTP cyclohydrolase I compare
Psyr_0827 -1.4 -5.1 pantothenate synthetase compare
Psyr_4009 -1.4 -4.9 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3581 -1.4 -4.4 ribosomal large subunit pseudouridine synthase B compare
Psyr_4116 -1.4 -1.7 Transport-associated protein compare
Psyr_3287 -1.4 -2.2 DNA topoisomerase I compare
Psyr_5130 -1.3 -6.2 chromosome segregation ATPase compare
Psyr_0377 -1.3 -6.4 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_2897 -1.3 -4.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0574 -1.3 -3.9 protease FtsH subunit HflK compare
Psyr_0066 -1.3 -5.6 bifunctional spore maturation protein, fused SpmA/SpmB compare
Psyr_0033 -1.3 -2.6 tryptophan synthase, alpha chain compare
Psyr_1227 -1.3 -1.6 Queuosine biosynthesis protein compare
Psyr_2471 -1.3 -1.9 hydroxymethylglutaryl-CoA lyase compare
Psyr_4143 -1.3 -2.4 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_4460 -1.2 -1.8 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1121 -1.2 -1.5 6-phosphogluconolactonase compare
Psyr_0378 -1.2 -5.4 Glycosyl transferase, family 2 compare
Psyr_3955 -1.1 -3.6 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_1910 -1.1 -2.2 VacJ-like lipoprotein compare
Psyr_0849 -1.1 -5.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1401 -1.1 -4.6 Histidine triad (HIT) protein compare
Psyr_2469 -1.1 -5.2 Propionyl-CoA carboxylase compare
Psyr_3755 -1.1 -1.6 conserved hypothetical protein compare
Psyr_0580 -1.1 -1.9 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_4842 -1.1 -3.3 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_1746 -1.0 -3.9 Trigger factor compare
Psyr_2830 -1.0 -3.4 conserved hypothetical protein compare
Psyr_0445 -1.0 -3.5 malonate decarboxylase, beta subunit compare
Psyr_4887 -1.0 -5.7 Peptidase S41A, C-terminal protease compare
Psyr_0044 -1.0 -1.4 transferase hexapeptide repeat protein compare
Psyr_0532 -1.0 -2.9 conserved hypothetical protein compare
Psyr_1748 -1.0 -2.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3179 -1.0 -1.3 DNA translocase FtsK compare
Psyr_1751 -1.0 -3.6 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_4991 -1.0 -1.3 hypothetical protein compare
Psyr_3842 -0.9 -3.3 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_2553 -0.9 -2.9 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases-related enzyme compare
Psyr_4491 -0.9 -1.5 Deoxyribose-phosphate aldolase compare
Psyr_3193 -0.9 -1.5 Transcription factor jumonji, jmjC compare
Psyr_0845 -0.9 -2.2 conserved hypothetical protein compare
Psyr_2980 -0.9 -1.7 UDP-glucose pyrophosphorylase compare
Psyr_2200 -0.9 -1.8 UreE urease accessory, N-terminal compare
Psyr_4822 -0.9 -1.8 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_4902 -0.9 -1.4 Protein of unknown function DUF495 compare
Psyr_1666 -0.9 -2.3 Sporulation related protein compare
Psyr_2973 -0.9 -1.8 Glyoxalase I compare
Psyr_1616 -0.9 -2.6 Rieske [2Fe-2S] region compare
Psyr_0535 -0.8 -1.6 toluene tolerance protein, putative compare
Psyr_3315 -0.8 -1.4 conserved hypothetical protein compare
Psyr_4808 -0.8 -0.9 conserved hypothetical protein compare
Psyr_3882 -0.8 -1.8 conserved hypothetical protein compare
Psyr_2275 -0.8 -2.9 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_0393 -0.8 -2.4 Protein of unknown function DUF971 compare
Psyr_2573 -0.8 -1.4 transcriptional regulator, DeoR family compare
Psyr_5029 -0.8 -1.4 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_0444 -0.8 -1.1 Malonate decarboxylase delta subunit compare
Psyr_3862 -0.8 -1.7 conserved hypothetical protein compare
Psyr_1864 -0.8 -1.9 spermidine synthase compare
Psyr_3399 -0.8 -2.6 Endoribonuclease L-PSP compare
Psyr_5129 -0.8 -2.3 chromosome segregation DNA-binding protein compare
Psyr_3854 -0.8 -1.0 OmpA/MotB compare
Psyr_2534 -0.8 -2.2 Carboxymethylenebutenolidase compare
Psyr_0947 -0.8 -3.4 TPR repeat protein:TPR repeat protein compare
Psyr_1245 -0.8 -2.8 23S rRNA m(2)A-2503 methyltransferase compare
Psyr_0811 -0.8 -3.7 Integral membrane protein TerC compare
Psyr_0137 -0.7 -1.3 outer membrane transport energization protein ExbD compare
Psyr_0215 -0.7 -3.7 Exodeoxyribonuclease III xth compare
Psyr_4716 -0.7 -1.9 Sarcosine oxidase, gamma subunit, heterotetrameric compare
Psyr_3674 -0.7 -1.1 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_2984 -0.7 -1.6 conserved hypothetical protein compare
Psyr_3691 -0.7 -3.8 conserved hypothetical protein compare
Psyr_3290 -0.7 -2.7 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_3014 -0.7 -1.6 protoporphyrin IX magnesium-chelatase compare
Psyr_4416 -0.7 -2.1 precorrin-8X methylmutase compare
Psyr_1547 -0.7 -2.0 glycine cleavage system transcriptional repressor compare
Psyr_0176 -0.7 -1.6 conserved hypothetical protein compare
Psyr_0491 -0.7 -2.6 chemotaxis sensory transducer compare
Psyr_4169 -0.7 -1.9 4-carboxymuconolactone decarboxylase compare
Psyr_3570 -0.7 -3.0 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_4167 -0.7 -1.9 Rare lipoprotein A compare
Psyr_2386 -0.7 -2.1 hypothetical protein compare
Psyr_3562 -0.7 -2.0 succinylglutamic semialdehyde dehydrogenase compare
Psyr_4316 -0.7 -2.2 conserved hypothetical protein compare
Psyr_3808 -0.7 -1.3 hypothetical protein compare
Psyr_3791 -0.7 -1.3 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_1614 -0.7 -1.1 lipid A biosynthesis acyltransferase compare
Psyr_1370 -0.7 -2.0 tRNA pseudouridine synthase D, TruD compare
Psyr_3208 -0.7 -1.2 NADH dehydrogenase subunit M compare
Psyr_0201 -0.7 -2.9 ATP-dependent DNA helicase RecG compare
Psyr_1749 -0.7 -3.4 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_0575 -0.7 -1.5 protease FtsH subunit HflC compare
Psyr_3146 -0.7 -1.2 general secretion pathway protein J, putative compare
Psyr_1094 -0.7 -1.8 cold-shock DNA-binding protein family compare
Psyr_4622 -0.6 -1.9 Nucleotidyl transferase compare
Psyr_4845 -0.6 -0.7 conserved hypothetical protein compare
Psyr_2695 -0.6 -1.7 conserved hypothetical protein compare
Psyr_3947 -0.6 -0.9 Methyltransferase, putative compare
Psyr_0831 -0.6 -1.0 Two-component response regulator CbrB compare
Psyr_4519 -0.6 -3.7 General substrate transporter:Major facilitator superfamily compare
Psyr_1091 -0.6 -2.9 aminopeptidase A, Metallo peptidase, MEROPS family M17 compare
Psyr_1650 -0.6 -1.4 aminodeoxychorismate lyase apoprotein compare
Psyr_3121 -0.6 -2.0 Protein of unknown function DUF1345 compare
Psyr_4466 -0.6 -1.9 Thioredoxin compare
Psyr_1040 -0.6 -1.8 RNA polymerase sigma factor, ECF subfamily compare
Psyr_3611 -0.6 -3.3 Protein of unknown function DUF815 compare
Psyr_0559 -0.6 -2.5 thiosulfate sulfurtransferase compare
Psyr_0579 -0.6 -3.9 RNAse R compare
Psyr_3046 -0.6 -2.2 Protein of unknown function DUF330 compare
Psyr_4151 -0.6 -0.8 Phosphocarrier HPr protein compare
Psyr_2282 -0.6 -4.5 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_2508 -0.6 -1.6 transcriptional regulator, IclR family compare
Psyr_3462 -0.6 -1.8 conserved hypothetical protein compare
Psyr_0603 -0.6 -3.4 N-acylglucosamine 2-epimerase compare
Psyr_0471 -0.6 -2.7 coproporphyrinogen III oxidase, anaerobic compare
Psyr_1471 -0.6 -2.4 hypothetical protein compare
Psyr_0278 -0.6 -2.5 ABC-3 compare
Psyr_2467 -0.6 -2.5 3-methylcrotonoyl-CoA carboxylase, alpha subunit compare
Psyr_4002 -0.6 -2.5 conserved hypothetical protein compare
Psyr_0184 -0.6 -1.4 Protein of unknown function DUF484 compare
Psyr_2990 -0.6 -0.9 conserved hypothetical protein compare
Psyr_0435 -0.6 -1.0 membrane protein, putative compare
Psyr_2807 -0.6 -0.7 NinB compare
Psyr_4920 -0.6 -1.4 conserved hypothetical bacteriophage protein compare
Psyr_3007 -0.6 -1.4 Protein of unknown function DUF1294 compare
Psyr_1249 -0.6 -2.0 histidyl-tRNA synthetase compare
Psyr_3795 -0.6 -1.7 hypothetical protein compare
Psyr_2026 -0.6 -1.5 conserved hypothetical protein compare
Psyr_2093 -0.6 -2.3 Mg2+ transporter protein, CorA-like protein compare
Psyr_1024 -0.6 -1.5 Flavodoxin/nitric oxide synthase compare
Psyr_4596 -0.5 -1.3 conserved hypothetical protein compare
Psyr_4882 -0.5 -2.3 protein translocase subunit secB compare
Psyr_1795 -0.5 -1.7 Taurine dioxygenase compare
Psyr_3821 -0.5 -3.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_4789 -0.5 -2.2 lipoprotein, putative compare
Psyr_1502 -0.5 -2.4 Low molecular weight phosphotyrosine protein phosphatase compare
Psyr_5065 -0.5 -2.7 ATP-dependent DNA helicase UvrD compare
Psyr_1955 -0.5 -1.9 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_3284 -0.5 -1.5 SOS cell division inhibitor SulA compare
Psyr_3933 -0.5 -1.4 conserved hypothetical protein compare
Psyr_3680 -0.5 -1.5 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_3879 -0.5 -1.4 hypothetical protein compare
Psyr_4118 -0.5 -2.4 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_1424 -0.5 -1.8 Peptidase S24, S26A and S26B compare
Psyr_2820 -0.5 -1.6 RecT protein compare
Psyr_5131 -0.5 -1.6 16S rRNA m(7)G-527 methyltransferase compare
Psyr_0070 -0.5 -0.9 hypothetical protein compare
Psyr_4415 -0.5 -2.6 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_4078 -0.5 -3.3 AmpG-related permease compare
Psyr_3429 -0.5 -1.3 CheW-like protein compare
Psyr_3751 -0.5 -1.3 Carbon storage regulator compare
Psyr_2868 -0.5 -1.9 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1983 -0.5 -2.4 3-isopropylmalate dehydratase, large subunit compare
Psyr_2227 -0.5 -1.3 conserved hypothetical protein compare
Psyr_1774 -0.5 -2.0 Mg2+ transporter protein, CorA-like protein compare
Psyr_2396 -0.5 -1.2 Tartrate dehydrogenase compare
Psyr_0391 -0.5 -1.5 Poly granule associated compare
Psyr_3458 -0.5 -1.6 Flagellar hook-basal body complex protein FliE compare
Psyr_2348 -0.5 -1.7 hypothetical protein compare
Psyr_3078 -0.5 -2.7 Peptidase M20:Peptidase M20 compare
Psyr_2925 -0.5 -1.8 Helix-turn-helix motif protein compare
Psyr_3590 -0.5 -2.3 conserved hypothetical protein compare
Psyr_2259 -0.5 -1.5 Beta-lactamase-like protein compare
Psyr_3723 -0.5 -1.5 CDS compare
Psyr_3476 -0.5 -1.3 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_4139 -0.5 -1.8 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_0907 -0.5 -1.3 conserved hypothetical protein compare
Psyr_0746 -0.5 -1.1 IS66 Orf2 like protein compare
Psyr_0185 -0.5 -2.2 tyrosine recombinase XerC subunit compare
Psyr_3281 -0.5 -1.0 Glycoside hydrolase, family 3, N-terminal compare
Psyr_1870 -0.5 -2.5 protein of unknown function DUF403 compare
Psyr_3040 -0.5 -1.7 conserved hypothetical protein compare
Psyr_0541 -0.5 -1.2 Small multidrug resistance protein compare
Psyr_0830 -0.5 -1.8 Poly(A) polymerase compare


Specific Phenotypes

For 3 genes in this experiment

For mixed community Paraburkholderia sabiae T6SS mutant in Pseudomonas syringae pv. syringae B728a

For mixed community Paraburkholderia sabiae T6SS mutant across organisms