Experiment set16S671 for Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a MLX with Paraburkholderia sabiae T6SS mutant
Group: mixed communityMedia: LB_noSalt + Paraburkholderia sabiae T6SS mutant
Culturing: SyringaeB728a_ML2a, agar plate, at 30 (C), (Solid)
By: Marta Torres on 6-Jul-23
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract
Specific Phenotypes
For 3 genes in this experiment
For mixed community Paraburkholderia sabiae T6SS mutant in Pseudomonas syringae pv. syringae B728a
For mixed community Paraburkholderia sabiae T6SS mutant across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| HMG CoA Synthesis | 1 |
| Leucine Degradation and HMG-CoA Metabolism | 1 |
| Serine-glyoxylate cycle | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Valine, leucine and isoleucine degradation
- Tryptophan metabolism
- Biosynthesis of siderophore group nonribosomal peptides
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| L-leucine degradation I | 6 | 5 | 1 |
| peptidoglycan recycling II | 10 | 8 | 1 |
| peptidoglycan recycling I | 14 | 10 | 1 |