Experiment set16S312 for Ralstonia solanacearum GMI1000
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
Group: stressMedia: SMSA + Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet
Culturing: RalstoniaGMI1000_ML2, tube, Aerobic, at 28 (C)
By: Nathalie Aoun on 5/29/2024_A
Media components: 10 g/L Bacto Peptone, 1 g/L casamino acids, 68 mM Glycerol
Specific Phenotypes
For 6 genes in this experiment
For stress Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Glutathione metabolism
- Metabolism of xenobiotics by cytochrome P450
- Drug metabolism - cytochrome P450
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| glutathione biosynthesis | 2 | 2 | 1 |
| ophthalmate biosynthesis | 3 | 2 | 1 |
| 4-hydroxy-2-nonenal detoxification | 4 | 1 | 1 |
| pentachlorophenol degradation | 10 | 3 | 2 |
| γ-glutamyl cycle | 6 | 4 | 1 |
| glutathione-mediated detoxification I | 8 | 3 | 1 |
| gliotoxin biosynthesis | 9 | 2 | 1 |
| glutathione-mediated detoxification II | 9 | 1 | 1 |
| indole glucosinolate activation (intact plant cell) | 12 | 3 | 1 |
| camalexin biosynthesis | 12 | 2 | 1 |