Experiment set16S309 for Ralstonia solanacearum GMI1000
SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
Group: stressMedia: SMSA + Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride
Culturing: RalstoniaGMI1000_ML2, tube, Aerobic, at 28 (C)
By: Nathalie Aoun on 5/29/2024_A
Media components: 10 g/L Bacto Peptone, 1 g/L casamino acids, 68 mM Glycerol
Specific Phenotypes
For 8 genes in this experiment
For stress Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride across organisms
SEED Subsystems
Subsystem | #Specific |
---|---|
Lipid A modifications | 2 |
LOS core oligosaccharide biosynthesis | 1 |
Methylcitrate cycle | 1 |
Orphan regulatory proteins | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Lipopolysaccharide biosynthesis
- Fructose and mannose metabolism
- Glycine, serine and threonine metabolism
- Benzoxazinone biosynthesis
- N-Glycan biosynthesis
- O-Glycan biosynthesis
- High-mannose type N-glycan biosynthesis
- O-Mannosyl glycan biosynthesis
- Keratan sulfate biosynthesis
- Peptidoglycan biosynthesis
- Glycerolipid metabolism
- Glycosylphosphatidylinositol(GPI)-anchor biosynthesis
- Sphingolipid metabolism
- Glycosphingolipid biosynthesis - lacto and neolacto series
- Glycosphingolipid biosynthesis - globo series
- Glycosphingolipid biosynthesis - ganglio series
- Diterpenoid biosynthesis
- Carotenoid biosynthesis - General
- Zeatin biosynthesis
- Flavonoid biosynthesis
- Anthocyanin biosynthesis
- Flavone and flavonol biosynthesis