Experiment set16IT070 for Pseudomonas stutzeri RCH2

Compare to:

Lactate-nitrate; anaerobic; uranyl acetate stress sample2

200 most important genes:

  gene name fitness t score description  
Psest_3480 -5.9 -3.5 molybdenum cofactor biosynthesis protein B, proteobacterial compare
Psest_0393 -4.7 -12.8 Methylase of chemotaxis methyl-accepting proteins compare
Psest_2232 -4.6 -14.1 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_1473 -4.5 -3.1 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent compare
Psest_3479 -4.4 -9.3 molybdenum cofactor synthesis domain compare
Psest_2988 -4.3 -9.6 aspartate kinase, monofunctional class compare
Psest_1115 -4.2 -4.1 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_1961 -4.1 -12.4 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Psest_3650 -4.0 -13.3 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_3483 -3.9 -8.9 respiratory nitrate reductase, gamma subunit compare
Psest_2234 -3.9 -13.2 oxygen-independent coproporphyrinogen III oxidase compare
Psest_3485 -3.8 -17.2 nitrate reductase, beta subunit compare
Psest_3170 -3.8 -6.2 molybdenum cofactor biosynthesis protein MoaC compare
Psest_3484 -3.5 -7.8 nitrate reductase molybdenum cofactor assembly chaperone compare
Psest_1724 -3.4 -4.7 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_3486 -3.4 -20.2 respiratory nitrate reductase, alpha subunit compare
Psest_0993 -3.2 -9.1 Glucose-6-phosphate isomerase compare
Psest_0508 -3.2 -9.0 gamma-glutamyl phosphate reductase compare
Psest_3168 -3.2 -3.4 Molybdopterin converting factor, large subunit compare
Psest_3648 -3.2 -8.9 anthranilate phosphoribosyltransferase compare
Psest_3488 -3.1 -4.9 Universal stress protein UspA and related nucleotide-binding proteins compare
Psest_0814 -3.1 -4.0 MoxR-like ATPases compare
Psest_3816 -3.0 -1.3 DNA-directed RNA polymerase, omega subunit compare
Psest_1292 -3.0 -7.2 monothiol glutaredoxin, Grx4 family compare
Psest_0296 -2.9 -11.3 glutathione synthetase, prokaryotic compare
Psest_3647 -2.9 -2.0 Indole-3-glycerol phosphate synthase compare
Psest_1657 -2.9 -2.0 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_2999 -2.9 -7.2 molybdenum ABC transporter, periplasmic molybdate-binding protein compare
Psest_1805 -2.8 -3.8 integration host factor, beta subunit compare
Psest_3998 -2.8 -8.4 glutamate--cysteine ligase compare
Psest_3301 -2.8 -5.3 Predicted transcriptional regulator, BolA superfamily compare
Psest_2584 -2.8 -7.0 Phosphoribosylanthranilate isomerase compare
Psest_3489 -2.7 -11.9 hypothetical protein compare
Psest_0828 -2.7 -7.3 Nitric oxide reductase activation protein compare
Psest_2329 -2.6 -14.3 Transcriptional regulator compare
Psest_1496 -2.5 -1.2 Holliday junction DNA helicase, RuvA subunit compare
Psest_2325 -2.5 -8.5 alpha-L-glutamate ligase-related protein compare
Psest_3000 -2.5 -9.8 molybdate ABC transporter, permease protein compare
Psest_0193 -2.4 -2.3 conserved hypothetical protein compare
Psest_0826 -2.4 -10.3 Cytochrome c compare
Psest_1511 -2.4 -4.6 Predicted redox protein, regulator of disulfide bond formation compare
Psest_1663 -2.4 -3.0 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_0799 -2.3 -5.3 Uncharacterized protein involved in response to NO compare
Psest_1814 -2.3 -15.9 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_2324 -2.3 -12.5 hypothetical protein compare
Psest_2067 -2.3 -2.7 ABC-type oligopeptide transport system, periplasmic component compare
Psest_3384 -2.3 -7.9 glutamate 5-kinase compare
Psest_0144 -2.2 -6.9 Fe-S cluster protector protein compare
Psest_3649 -2.2 -9.1 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_2088 -2.1 -2.0 Uncharacterized protein conserved in bacteria compare
Psest_3490 -2.1 -4.3 Signal transduction histidine kinase, nitrate/nitrite-specific compare
Psest_0708 -2.1 -1.9 outer membrane assembly lipoprotein YfiO compare
Psest_0152 -2.0 -7.6 Imidazoleglycerol-phosphate dehydratase compare
Psest_0297 -2.0 -4.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0827 -1.9 -12.7 Nitric oxide reductase large subunit compare
Psest_0575 -1.9 -1.0 HrpA-like helicases compare
Psest_3031 -1.9 -0.9 hypothetical protein compare
Psest_1870 -1.9 -1.5 Transcriptional regulators compare
Psest_2579 -1.9 -1.3 amidophosphoribosyltransferase compare
Psest_1974 -1.8 -3.8 integration host factor, alpha subunit compare
Psest_3001 -1.8 -6.3 molybdenum ABC transporter, ATP-binding protein compare
Psest_0999 -1.8 -1.2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0466 -1.8 -3.9 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_2104 -1.7 -1.2 IscR-regulated protein YhgI compare
Psest_1505 -1.7 -1.9 Organic radical activating enzymes compare
Psest_0309 -1.7 -1.0 RND family efflux transporter, MFP subunit compare
Psest_0062 -1.7 -2.3 tryptophan synthase, alpha subunit compare
Psest_1813 -1.7 -8.9 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_1012 -1.7 -2.9 Signal transduction histidine kinase compare
Psest_0836 -1.6 -7.6 Collagenase and related proteases compare
Psest_0845 -1.6 -0.7 hypothetical protein compare
Psest_4310 -1.5 -1.3 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_1655 -1.5 -2.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_0958 -1.5 -5.7 Oligoketide cyclase/lipid transport protein compare
Psest_0959 -1.5 -2.0 Uncharacterized protein conserved in bacteria compare
Psest_3988 -1.5 -6.1 phosphoenolpyruvate carboxykinase (ATP) compare
Psest_0520 -1.4 -0.9 hypothetical protein compare
Psest_3113 -1.4 -2.3 electron transport complex, RnfABCDGE type, B subunit compare
Psest_4010 -1.4 -1.3 peroxiredoxin, OsmC subfamily compare
Psest_0835 -1.4 -9.5 Collagenase and related proteases compare
Psest_0442 -1.4 -2.0 ATPases of the AAA+ class compare
Psest_0385 -1.4 -2.9 Conserved secreted protein compare
Psest_3766 -1.4 -2.1 Uncharacterized protein conserved in bacteria compare
Psest_0837 -1.4 -3.2 Putative lipid carrier protein compare
Psest_1295 -1.4 -4.4 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_4316 -1.4 -3.7 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Psest_3298 -1.4 -7.1 histidinol dehydrogenase compare
Psest_1167 -1.3 -1.1 hypothetical protein compare
Psest_0334 -1.3 -2.4 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_3092 -1.3 -1.5 ribonuclease III, bacterial compare
Psest_1656 -1.3 -1.4 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_1518 -1.3 -2.2 tRNA_Ser_CGA compare
Psest_4314 -1.3 -4.4 ABC-type metal ion transport system, ATPase component compare
Psest_2764 -1.3 -1.0 hypothetical protein compare
Psest_3843 -1.2 -6.9 4-hydroxybenzoate synthetase (chorismate lyase) compare
Psest_3044 -1.2 -4.6 deoxycytidine triphosphate deaminase compare
Psest_3487 -1.2 -4.5 Nitrate/nitrite transporter compare
Psest_3921 -1.2 -3.5 Uncharacterized protein conserved in bacteria compare
Psest_0155 -1.2 -4.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
Psest_4345 -1.2 -4.7 Bacteriophytochrome (light-regulated signal transduction histidine kinase) compare
Psest_0257 -1.2 -2.4 Predicted Zn-dependent peptidases compare
Psest_1749 -1.2 -4.8 Chemotaxis signal transduction protein compare
Psest_0844 -1.2 -2.9 High-affinity Fe2+/Pb2+ permease compare
Psest_2123 -1.2 -1.5 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) compare
Psest_2323 -1.2 -5.9 Uncharacterized protein conserved in archaea compare
Psest_1748 -1.1 -5.1 CheW-like domain. compare
Psest_3862 -1.1 -6.8 phosphoenolpyruvate-protein phosphotransferase compare
Psest_4126 -1.1 -2.4 Predicted peroxiredoxins compare
Psest_3275 -1.1 -4.2 Stringent starvation protein B compare
Psest_3317 -1.1 -2.8 Phosphotransferase System HPr (HPr) Family compare
Psest_2771 -1.1 -2.6 Predicted membrane protein compare
Psest_2798 -1.1 -2.9 Truncated hemoglobins compare
Psest_0153 -1.1 -5.9 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit compare
Psest_0462 -1.1 -9.1 Lipid A core - O-antigen ligase and related enzymes compare
Psest_2243 -1.1 -0.6 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_3960 -1.1 -1.0 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_3129 -1.0 -0.9 tyrosine recombinase XerD compare
Psest_3299 -1.0 -6.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
Psest_1293 -1.0 -1.3 VanZ like family. compare
Psest_0182 -1.0 -4.6 glycine cleavage system H protein compare
Psest_1622 -1.0 -2.8 hypothetical protein compare
Psest_1819 -1.0 -7.3 Nucleoside-diphosphate-sugar epimerases compare
Psest_0498 -1.0 -0.6 ribosome small subunit-dependent GTPase A compare
Psest_0164 -1.0 -0.6 Glutaredoxin, GrxC family compare
Psest_3828 -1.0 -0.9 zinc-binding alcohol dehydrogenase family protein compare
Psest_2969 -1.0 -4.1 Methylase of chemotaxis methyl-accepting proteins compare
Psest_3174 -0.9 -6.0 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Psest_2810 -0.9 -3.0 5'/3'-nucleotidase SurE compare
Psest_3112 -0.9 -2.5 electron transport complex, RnfABCDGE type, A subunit compare
Psest_3718 -0.9 -3.8 Tfp pilus assembly protein PilN compare
Psest_1249 -0.9 -2.5 serine O-acetyltransferase compare
Psest_2758 -0.9 -1.8 Predicted transcriptional regulators compare
Psest_0813 -0.9 -3.0 Heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Psest_0015 -0.9 -1.6 Tetratricopeptide repeat. compare
Psest_2268 -0.9 -3.4 Alcohol dehydrogenase, class IV compare
Psest_3115 -0.9 -4.1 electron transport complex, RnfABCDGE type, D subunit compare
Psest_2517 -0.9 -1.7 hypothetical protein compare
Psest_3881 -0.9 -1.0 hypothetical protein compare
Psest_3938 -0.9 -2.7 Uncharacterized protein conserved in bacteria compare
Psest_0855 -0.9 -3.8 NAD-dependent aldehyde dehydrogenases compare
Psest_4003 -0.9 -2.8 TIGR00153 family protein compare
Psest_2280 -0.9 -3.2 Predicted membrane protein compare
Psest_0313 -0.9 -2.6 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_3645 -0.9 -4.9 Predicted redox protein, regulator of disulfide bond formation compare
Psest_0537 -0.9 -1.9 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
Psest_3944 -0.9 -2.6 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Psest_1741 -0.9 -1.3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_1563 -0.9 -1.7 Protein of unknown function (DUF548). compare
Psest_0409 -0.9 -2.1 Putative homoserine kinase type II (protein kinase fold) compare
Psest_3481 -0.9 -3.0 molybdenum cofactor biosynthesis protein A, bacterial compare
Psest_2090 -0.8 -2.1 Protein of unknown function (DUF2970). compare
Psest_0687 -0.8 -3.5 ATP phosphoribosyltransferase, regulatory subunit compare
Psest_2136 -0.8 -2.4 Predicted homoserine dehydrogenase compare
Psest_3720 -0.8 -5.2 penicillin-binding protein, 1A family compare
Psest_3322 -0.8 -6.5 TIGR02099 family protein compare
Psest_2424 -0.8 -1.3 K+ transport systems, NAD-binding component compare
Psest_3288 -0.8 -5.3 type IV-A pilus assembly ATPase PilB compare
Psest_1417 -0.8 -1.2 hypothetical protein compare
Psest_3864 -0.8 -5.6 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
Psest_3323 -0.8 -2.9 ribonuclease, Rne/Rng family compare
Psest_0872 -0.8 -0.9 Helix-turn-helix. compare
Psest_2809 -0.8 -1.6 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psest_3400 -0.8 -0.9 Copper resistance protein D. compare
Psest_0842 -0.8 -1.1 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_3188 -0.8 -2.6 hypothetical protein compare
Psest_0187 -0.8 -2.8 Metal-dependent hydrolase compare
Psest_0299 -0.8 -2.1 Chemotaxis signal transduction protein compare
Psest_4252 -0.8 -2.3 Uncharacterized protein conserved in bacteria compare
Psest_0279 -0.8 -3.3 methionine biosynthesis protein MetW compare
Psest_1809 -0.8 -4.1 Membrane protein involved in the export of O-antigen and teichoic acid compare
Psest_0300 -0.7 -3.4 Methyl-accepting chemotaxis protein compare
Psest_0013 -0.7 -2.2 Lauroyl/myristoyl acyltransferase compare
Psest_1466 -0.7 -2.2 transcriptional regulator, Spx/MgsR family compare
Psest_4363 -0.7 -3.5 ATPases involved in chromosome partitioning compare
Psest_2945 -0.7 -0.7 septum site-determining protein MinC compare
Psest_4315 -0.7 -1.7 ABC-type metal ion transport system, permease component compare
Psest_1812 -0.7 -4.1 pseudaminic acid CMP-transferase compare
Psest_3084 -0.7 -1.2 methyltransferase, putative compare
Psest_3853 -0.7 -1.1 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_0954 -0.7 -2.7 Fe-S oxidoreductase compare
Psest_0461 -0.7 -2.3 Glycosyltransferase involved in LPS biosynthesis compare
Psest_2647 -0.7 -1.9 SOS-response cell division inhibitor, blocks FtsZ ring formation compare
Psest_2491 -0.7 -3.0 succinyl-CoA synthetase, beta subunit compare
Psest_0593 -0.7 -3.5 Protein of unknown function (DUF2933). compare
Psest_0886 -0.7 -3.1 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Psest_3080 -0.7 -1.5 AraC-type DNA-binding domain-containing proteins compare
Psest_1540 -0.7 -0.8 biotin-dependent carboxylase uncharacterized domain compare
Psest_3063 -0.7 -2.5 hypothetical protein compare
Psest_3297 -0.7 -4.1 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
Psest_2628 -0.7 -1.7 Flp pilus assembly protein, protease CpaA compare
Psest_1486 -0.7 -1.8 hypothetical protein compare
Psest_3860 -0.7 -1.2 Predicted permeases compare
Psest_2786 -0.7 -0.8 Domain of unknown function (DUF3597). compare
Psest_4303 -0.7 -1.0 HEAT repeat. compare
Psest_0988 -0.7 -1.8 Protein of unknown function (DUF2845). compare
Psest_3414 -0.7 -3.9 hypothetical protein compare
Psest_0443 -0.7 -3.8 methionine-S-sulfoxide reductase compare
Psest_0740 -0.7 -1.2 Transcriptional regulator compare
Psest_3286 -0.7 -2.3 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases compare
Psest_3736 -0.7 -2.2 Uncharacterized protein conserved in bacteria compare


Specific Phenotypes

For 1 genes in this experiment

For stress Uranyl acetate in Pseudomonas stutzeri RCH2

For stress Uranyl acetate across organisms