Experiment set16IT067 for Pseudomonas stutzeri RCH2
Lactate-nitrate; anaerobic; dichromate stress sample2
Group: stressMedia: RCH2_Lactate_Nitrate_YE + Potassium dichromate (240 uM), pH=7
Culturing: psRCH2_ML7e, hungate, Anaerobic, at 30 (C), shaken=200 rpm
Growth: about 4.9 generations
By: Mike Adams on 5/12/2014
Specific Phenotypes
For 12 genes in this experiment
For stress Potassium dichromate in Pseudomonas stutzeri RCH2
For stress Potassium dichromate across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| thiosulfate disproportionation IV (rhodanese) | 1 | 1 | 1 |
| L-glutamate degradation I | 1 | 1 | 1 |
| L-cysteine degradation III | 2 | 1 | 1 |
| L-alanine degradation II (to D-lactate) | 3 | 3 | 1 |
| ethene biosynthesis IV (engineered) | 3 | 1 | 1 |
| ammonia oxidation II (anaerobic) | 3 | 1 | 1 |
| nitrite-dependent anaerobic methane oxidation | 3 | 1 | 1 |
| nitrate reduction I (denitrification) | 5 | 4 | 1 |
| nitrate reduction VII (denitrification) | 5 | 3 | 1 |
| sulfide oxidation IV (mitochondria) | 5 | 2 | 1 |
| nitrifier denitrification | 6 | 3 | 1 |
| L-glutamate degradation XI (reductive Stickland reaction) | 7 | 4 | 1 |
| 4-aminobutanoate degradation V | 7 | 3 | 1 |
| L-glutamate degradation V (via hydroxyglutarate) | 10 | 7 | 1 |
| methylaspartate cycle | 19 | 9 | 1 |