Experiment set16IT047 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

D-Trehalose dihydrate 20mM carbon source

200 most important genes:

  gene name fitness t score description  
BT3759 -5.2 -3.6 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT3757 -5.1 -6.0 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT3761 -5.1 -3.5 N-succinylglutamate synthase (from data) compare
BT1607 -5.0 -3.5 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT1746 -5.0 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT3395 -4.9 -8.3 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT3933 -4.9 -5.9 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1377 -4.9 -3.4 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT3760 -4.8 -3.3 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT2402 -4.8 -10.2 phosphoglycerate mutase (NCBI ptt file) compare
BT3733 -4.7 -10.4 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT2403 -4.5 -9.2 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT1374 -4.5 -4.4 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT1379 -4.4 -4.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT0530 -4.3 -3.0 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT2074 -4.3 -8.7 ketol-acid reductoisomerase (NCBI ptt file) compare
BT1859 -4.2 -2.9 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT1152 -4.1 -2.9 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT3549 -4.1 -4.9 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT3253 -4.1 -2.8 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT0891 -4.0 -2.8 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT2003 -4.0 -2.1 putative membrane peptidase (NCBI ptt file) compare
BT3758 -4.0 -3.9 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT2076 -4.0 -10.2 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT1843 -3.9 -9.2 adenylosuccinate synthetase (NCBI ptt file) compare
BT2837 -3.9 -15.4 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT3718 -3.9 -12.2 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT1861 -3.9 -7.4 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT1858 -3.9 -8.9 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT1153 -3.8 -7.4 phosphoserine aminotransferase (NCBI ptt file) compare
BT3164 -3.8 -9.0 quinolinate synthetase A (NCBI ptt file) compare
BT4211 -3.7 -2.6 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT3320 -3.7 -6.7 dihydrodipicolinate reductase (NCBI ptt file) compare
BT0833 -3.7 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2401 -3.7 -9.5 threonine synthase (NCBI ptt file) compare
BT3197 -3.7 -1.7 hypothetical protein (NCBI ptt file) compare
BT2077 -3.6 -8.8 acetolactate synthase large subunit (NCBI ptt file) compare
BT3717 -3.6 -2.5 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT1378 -3.6 -4.9 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT1857 -3.6 -6.5 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT3936 -3.6 -2.4 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT0529 -3.6 -2.5 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT2078 -3.5 -9.4 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT0203 -3.5 -2.4 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT1270 -3.5 -5.8 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1381 -3.4 -5.3 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT0528 -3.4 -3.9 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT0532 -3.4 -5.2 anthranilate synthase component I (NCBI ptt file) compare
BT0200 -3.4 -3.3 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT1704 -3.4 -1.8 hypothetical protein (NCBI ptt file) compare
BT3184 -3.3 -13.8 L-aspartate oxidase (NCBI ptt file) compare
BT0596 -3.3 -1.8 putative transcriptional regulator (NCBI ptt file) compare
BT1476 -3.3 -5.5 aspartate aminotransferase (NCBI ptt file) compare
BT2836 -3.2 -13.9 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT4571 -3.2 -2.2 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1860 -3.2 -5.3 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT0202 -3.2 -6.8 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT3719 -3.2 -5.7 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT2853 -3.2 -2.3 hypothetical protein (NCBI ptt file) compare
BT0533 -3.2 -2.2 tryptophan synthase beta chain (NCBI ptt file) compare
BT4339 -3.1 -3.7 glutamine synthetase (NCBI ptt file) compare
BT1733 -3.1 -7.2 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT3022 -3.1 -2.0 hypothetical protein (NCBI ptt file) compare
BT2129 -3.1 -6.5 aspartate--ammonia ligase (NCBI ptt file) compare
BT1363 -3.1 -1.8 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT0631 -3.1 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT3193 -3.0 -12.0 putative coenzyme A transferase (NCBI ptt file) compare
BT0844 -3.0 -1.6 hypothetical protein (NCBI ptt file) compare
BT2415 -3.0 -11.4 aspartate aminotransferase (NCBI ptt file) compare
BT1564 -2.8 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0790 -2.8 -3.3 phosphomethylpyrimidine kinase (NCBI ptt file) compare
BT1844 -2.8 -5.8 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT2080 -2.8 -5.7 L-cysteine desulfidase cdsB (from data) compare
BT1970 -2.8 -10.1 glutamate dehydrogenase (NCBI ptt file) compare
BT2160 -2.8 -13.3 SusR4: regulator of disaccharide catabolism (SusR4) (from data) compare
BT3918 -2.7 -2.8 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT0738 -2.7 -3.7 serine hydroxymethyltransferase (NCBI ptt file) compare
BT3845 -2.7 -1.9 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) compare
BT0201 -2.6 -4.7 histidinol dehydrogenase (NCBI ptt file) compare
BT0652 -2.6 -2.2 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) compare
BT0033 -2.6 -2.4 hypothetical protein (NCBI ptt file) compare
BT0647 -2.6 -1.8 thiamine phosphate pyrophosphorylase (NCBI ptt file) compare
BT3361 -2.5 -7.4 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT3394 -2.5 -7.6 putative arginine decarboxylase (NCBI ptt file) compare
BT1295 -2.5 -1.6 V-type sodium ATP synthase subunit K (NCBI ptt file) compare
BT0185 -2.5 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1524 -2.4 -1.4 hypothetical protein (NCBI ptt file) compare
BT1747 -2.4 -7.3 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT2299 -2.4 -2.6 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT1222 -2.4 -1.6 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT2546 -2.4 -8.9 transcriptional regulator (NCBI ptt file) compare
BT1375 -2.3 -8.8 aspartokinase (NCBI ptt file) compare
BT3363 -2.3 -1.6 lipopolysaccharide core biosynthesis protein LpsA (NCBI ptt file) compare
BT0527 -2.3 -5.7 tryptophan synthase alpha chain (NCBI ptt file) compare
BT0242 -2.3 -2.2 putative polysaccharide deacetylase (NCBI ptt file) compare
BT4063 -2.3 -3.3 NADH dehydrogenase I, chain I (NCBI ptt file) compare
BT1336 -2.3 -2.6 putative translation initiation inhibitor (NCBI ptt file) compare
BT3866 -2.3 -13.0 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) compare
BT2932 -2.3 -2.7 transcriptional regulator (NCBI ptt file) compare
BT2173 -2.2 -6.2 hypothetical protein (NCBI ptt file) compare
BT0648 -2.2 -5.3 molybdopterin biosynthesis protein (NCBI ptt file) compare
BT2042 -2.2 -2.3 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT0151 -2.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT2157 -2.1 -2.6 3-keto-alpha-glucoside 1,2-lyase; 3-ketoglucose dehydratase (from data) compare
BT2159 -2.1 -6.6 3-ketoglucose reductase (NAD(P)H) (from data) compare
BT0927 -2.1 -1.4 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1369 -2.1 -2.0 hypothetical protein (NCBI ptt file) compare
BT1979 -2.1 -4.0 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT0016 -2.1 -2.6 hypothetical protein (NCBI ptt file) compare
BT4454 -2.0 -3.5 conserved hypothetical protein (NCBI ptt file) compare
BT1443 -2.0 -4.9 8-amino-7-oxononanoate synthase (NCBI ptt file) compare
BT0095 -2.0 -1.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4610 -2.0 -2.0 RecA (NCBI ptt file) compare
BT0134 -2.0 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0814 -2.0 -3.0 conserved hypothetical protein, putative outer membrane protein (NCBI ptt file) compare
BT3737 -2.0 -1.6 hypothetical protein (NCBI ptt file) compare
BT0799 -2.0 -1.6 hypothetical protein (NCBI ptt file) compare
BT1851 -2.0 -3.9 TPR-repeat-containing protein (NCBI ptt file) compare
BT1161 -2.0 -4.6 putative aminopeptidase C (NCBI ptt file) compare
BT2781 -1.9 -4.1 putative mannose-1-phosphate guanylyltransferase (NCBI ptt file) compare
BT4328 -1.9 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0400 -1.9 -2.4 putative tyrosine-protein kinase in capsular polysaccharide biosynthesis region (NCBI ptt file) compare
BT0751 -1.9 -2.6 putative efflux pump component protein (NCBI ptt file) compare
BT0651 -1.9 -1.5 thiamine biosynthesis protein ThiG (NCBI ptt file) compare
BT0376 -1.9 -1.3 putative transcriptional regulator (NCBI ptt file) compare
BT2169 -1.9 -3.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
p5482_02 -1.9 -7.0 hypothetical protein (NCBI) compare
BT4103 -1.9 -3.9 putative Sec-independent protein translocase (NCBI ptt file) compare
BT3935 -1.9 -4.1 aminotransferase (NCBI ptt file) compare
BT1419 -1.9 -2.6 hypothetical protein (NCBI ptt file) compare
BT0677 -1.8 -1.9 thioredoxin (TRX) (NCBI ptt file) compare
BT1071 -1.8 -1.9 hypothetical protein (NCBI ptt file) compare
BT3762 -1.8 -2.9 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT0650 -1.8 -3.7 thiamine biosynthesis protein ThiC (NCBI ptt file) compare
BT1230 -1.8 -2.6 hypothetical protein (NCBI ptt file) compare
BT1442 -1.8 -6.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (NCBI ptt file) compare
BT1402 -1.7 -2.9 iron-sulfur flavoprotein (NCBI ptt file) compare
BT0767 -1.7 -3.3 putative para-aminobenzoate synthase component I (NCBI ptt file) compare
BT2684 -1.7 -1.8 hypothetical protein (NCBI ptt file) compare
BT2646 -1.7 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1127 -1.7 -1.7 mobilization protein BmgB (NCBI ptt file) compare
BT3840 -1.7 -3.8 putative RNA-binding protein rbpA (NCBI ptt file) compare
BT1221 -1.7 -2.5 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT0491 -1.6 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1576 -1.6 -1.7 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT1933 -1.6 -2.6 transposase (NCBI ptt file) compare
BT3894 -1.6 -3.2 putative methyltransferase (NCBI ptt file) compare
BT0378 -1.6 -1.9 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) compare
BT2037 -1.6 -2.2 hypothetical protein (NCBI ptt file) compare
BT1173 -1.6 -2.2 hypothetical protein (NCBI ptt file) compare
BT0638 -1.6 -4.0 putative methionine aminopeptidase A (NCBI ptt file) compare
BT0881 -1.6 -2.2 hypothetical protein (NCBI ptt file) compare
BT0892 -1.5 -1.0 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT0427 -1.5 -1.9 xanthine phosphoribosyltransferase (NCBI ptt file) compare
BT1451 -1.5 -2.9 hypothetical protein (NCBI ptt file) compare
BT4452 -1.5 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1994 -1.5 -2.9 hypothetical protein (NCBI ptt file) compare
BT1644 -1.5 -3.8 putative CPS biosynthesis glycosyltransferase (NCBI ptt file) compare
BT0972 -1.5 -1.9 putative oxidoreductase (NCBI ptt file) compare
BT0592 -1.5 -3.6 conserved hypothetical protein (NCBI ptt file) compare
BT4638 -1.5 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT0443 -1.5 -1.3 thermostable beta-glucosidase B (NCBI ptt file) compare
BT1298 -1.5 -3.2 V-type ATP synthase subunit B (NCBI ptt file) compare
BT0044 -1.5 -2.6 putative glycosyltransferase (NCBI ptt file) compare
BT2490 -1.4 -1.6 hypothetical protein (NCBI ptt file) compare
BT0896 -1.4 -1.7 putative patatin-like phospholipase (NCBI ptt file) compare
BT1951 -1.4 -2.2 Fe3+ ABC transporter, permease protein (NCBI ptt file) compare
BT1446 -1.4 -3.5 dethiobiotin synthetase (NCBI ptt file) compare
BT1169 -1.4 -1.6 hypothetical protein (NCBI ptt file) compare
BT0621 -1.4 -1.0 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) compare
BT1395 -1.4 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1641 -1.4 -0.9 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1836 -1.4 -5.6 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT1689 -1.4 -3.4 oxaloacetate decarboxylase beta chain (NCBI ptt file) compare
BT0160 -1.4 -3.0 hypothetical protein (NCBI ptt file) compare
BT3368 -1.4 -1.7 putative glycosyltransferase (NCBI ptt file) compare
BT3462 -1.4 -3.0 TPR domain protein (NCBI ptt file) compare
BT1080 -1.4 -1.2 hypothetical protein (NCBI ptt file) compare
BT1654 -1.4 -3.1 polysialic acid transport protein kpsD precursor (NCBI ptt file) compare
BT0679 -1.4 -2.3 cation efflux system protein czcB (NCBI ptt file) compare
BT1698 -1.4 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT4363 -1.4 -2.5 putative alkaline phosphatase (NCBI ptt file) compare
BT3727 -1.3 -2.9 hypothetical protein (NCBI ptt file) compare
BT1372 -1.3 -4.0 hypothetical protein (NCBI ptt file) compare
BT2467 -1.3 -3.4 hypothetical protein (NCBI ptt file) compare
BT0937 -1.3 -1.6 hypothetical protein (NCBI ptt file) compare
BT1834 -1.3 -3.4 putative hydrogenase (NCBI ptt file) compare
BT0130 -1.3 -1.7 putative oxidoreductase (NCBI ptt file) compare
BT4161 -1.3 -1.3 hypothetical protein (NCBI ptt file) compare
BT4644 -1.3 -2.3 putative anti-sigma factor (NCBI ptt file) compare
BT4551 -1.3 -1.7 putative GTPase, ThdF family (NCBI ptt file) compare
BT2446 -1.3 -2.7 integrase (NCBI ptt file) compare
BT3481 -1.3 -1.3 putative glutaminase A (NCBI ptt file) compare
BT0649 -1.3 -2.8 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT4223 -1.3 -2.1 hypothetical protein (NCBI ptt file) compare
BT4102 -1.3 -1.2 putative Sec-independent protein translocase (NCBI ptt file) compare
BT0411 -1.3 -2.8 CysQ, sulfite synthesis pathway protein (NCBI ptt file) compare
BT0697 -1.3 -1.2 putative phosphatase/phosphohexomutase (NCBI ptt file) compare
BT0077 -1.3 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1972 -1.2 -5.7 phosphoenolpyruvate synthase/pyruvate phosphate dikinase (NCBI ptt file) compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Trehalose dihydrate in Bacteroides thetaiotaomicron VPI-5482

For carbon source D-Trehalose dihydrate across organisms