Experiment set16IT044 for Pseudomonas fluorescens SBW25-INTG

Compare to:

4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS

Genes with specific phenotypes:

  gene name fitness t score description  
PFLU_RS00705 -3.9 -14.9 FUSC family protein compare
PFLU_RS00715 -3.7 -16.2 efflux RND transporter periplasmic adaptor subunit compare
PFLU_RS00710 -3.7 -16.9 DUF1656 domain-containing protein compare
PFLU_RS00720 -3.6 -9.9 efflux transporter outer membrane subunit compare
PFLU_RS19360 -3.3 -16.9 alpha-ketoacid dehydrogenase subunit beta compare
PFLU_RS26745 -3.2 -13.1 aldehyde dehydrogenase compare
PFLU_RS19365 -3.1 -11.5 2-oxo acid dehydrogenase subunit E2 compare
PFLU_RS19355 -3.1 -14.4 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha compare
PFLU_RS26740 -2.8 -13.4 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS19350 -2.7 -6.8 Lrp/AsnC family transcriptional regulator compare
PFLU_RS00700 -2.7 -6.6 winged helix DNA-binding protein compare
PFLU_RS15605 -2.2 -10.3 DMT family transporter compare
PFLU_RS06635 -2.2 -12.5 high-affinity branched-chain amino acid ABC transporter permease LivM compare
PFLU_RS06645 -2.1 -11.1 branched-chain amino acid ABC transporter substrate-binding protein compare
PFLU_RS24455 -2.0 -5.3 membrane protein FxsA compare
PFLU_RS06640 -1.9 -11.0 high-affinity branched-chain amino acid ABC transporter permease LivH compare
PFLU_RS06625 -1.9 -5.7 ABC transporter ATP-binding protein compare
PFLU_RS18980 -1.8 -9.1 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha compare
PFLU_RS04655 -1.8 -6.3 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
PFLU_RS27495 -1.8 -13.5 SpoVR family protein compare
PFLU_RS27020 -1.8 -8.9 MFS transporter compare
PFLU_RS30955 -1.8 -7.4 type II toxin-antitoxin system MqsA family antitoxin compare
PFLU_RS27490 -1.7 -11.2 YeaH/YhbH family protein compare
PFLU_RS00290 -1.7 -9.5 cytochrome c oxidase subunit II compare
PFLU_RS00915 -1.7 -9.0 4-aminobutyrate--2-oxoglutarate transaminase compare
PFLU_RS11575 -1.6 -5.7 DeoR/GlpR transcriptional regulator compare
PFLU_RS22685 -1.6 -7.9 2-methylcitrate synthase compare
PFLU_RS09830 -1.6 -10.7 GntR family transcriptional regulator compare
PFLU_RS29190 -1.6 -6.7 disulfide bond formation protein B compare
PFLU_RS00305 -1.6 -8.2 cytochrome c oxidase subunit 3 compare
PFLU_RS18965 -1.5 -9.9 isovaleryl-CoA dehydrogenase compare
PFLU_RS28955 -1.5 -7.0 TIGR02449 family protein compare
PFLU_RS27485 -1.5 -10.6 PrkA family serine protein kinase compare
PFLU_RS18360 -1.5 -7.2 Bax inhibitor-1/YccA family protein compare
PFLU_RS00295 -1.5 -9.9 cytochrome c oxidase subunit I compare
PFLU_RS26365 -1.4 -10.8 TetR/AcrR family transcriptional regulator compare
PFLU_RS21450 -1.4 -7.2 M18 family aminopeptidase compare
PFLU_RS18970 -1.3 -7.4 methylcrotonoyl-CoA carboxylase compare
PFLU_RS18975 -1.3 -5.7 gamma-carboxygeranoyl-CoA hydratase compare
PFLU_RS00240 -1.3 -7.9 oligopeptidase A compare
PFLU_RS06415 -1.3 -5.8 5'/3'-nucleotidase SurE compare
PFLU_RS00325 -1.2 -7.0 heme A synthase compare
PFLU_RS00315 -1.2 -5.5 SURF1 family protein compare
PFLU_RS30015 -1.2 -6.3 class I SAM-dependent methyltransferase compare
PFLU_RS13075 -1.1 -6.0 hypothetical protein compare
PFLU_RS19055 -1.1 -5.7 cell division protein ZapE compare
PFLU_RS05145 -1.1 -5.2 HPF/RaiA family ribosome-associated protein compare
PFLU_RS09820 -1.0 -5.7 polysaccharide deacetylase compare
PFLU_RS20695 +1.4 8.4 M4 family metallopeptidase compare
PFLU_RS24020 +1.4 6.3 RDD family protein compare
PFLU_RS21910 +1.5 12.4 BamA/TamA family outer membrane protein compare


Specific phenotypes for no stress control 4-Hydroxybenzoic Acid across organisms